RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 SNAPC4Q5SXM2 1469 aa12.04□□□□□ -0.48
CD9-207ENST00000538418 FIGNL2A6NMB9 653 aa12.04□□□□□ -0.48
CD9-207ENST00000538418 PDE2AO00408 941 aaPredicted RBP12.04□□□□□ -0.48
CD9-207ENST00000538418 NME2P22392 152 aa12.04□□□□□ -0.48
CD9-207ENST00000538418 LBRQ14739 615 aaKnown RBP12.04□□□□□ -0.48
CD9-207ENST00000538418 MRPL14Q6P1L8 145 aaKnown RBP12.04□□□□□ -0.48
CD9-207ENST00000538418 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
CD9-207ENST00000538418 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
CD9-207ENST00000538418 ST13P5Q8NFI4 369 aaPredicted RBP12.04□□□□□ -0.48
CD9-207ENST00000538418 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
CD9-207ENST00000538418 EHMT1Q9H9B1 1298 aa12.04□□□□□ -0.48
CD9-207ENST00000538418 CUX1P39880 1505 aa12.03□□□□□ -0.48
CD9-207ENST00000538418 SSRP1Q08945 709 aaKnown RBP12.03□□□□□ -0.48
CD9-207ENST00000538418 LAMC2Q13753 1193 aa12.03□□□□□ -0.48
CD9-207ENST00000538418 LRRC14Q15048 493 aa12.03□□□□□ -0.48
CD9-207ENST00000538418 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
CD9-207ENST00000538418 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
CD9-207ENST00000538418 C19orf47Q8N9M1 422 aaKnown RBP12.03□□□□□ -0.48
CD9-207ENST00000538418 ZMYM5Q9UJ78 669 aa12.03□□□□□ -0.48
CD9-207ENST00000538418 PCDHGC4Q9Y5F7 938 aa12.03□□□□□ -0.48
CD9-207ENST00000538418 SYNJ1O43426 1573 aa12.03□□□□□ -0.48
CD9-207ENST00000538418 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.48
CD9-207ENST00000538418 DCDC2BA2VCK2 349 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 MAP4K4O95819 1239 aaPredicted RBP12.02□□□□□ -0.49
CD9-207ENST00000538418 NRLP54845 237 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 ODR4Q5SWX8 454 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 PSMD1Q99460 953 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 IER2Q9BTL4 223 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 MUC3BQ9H195 1237 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 STRN4Q9NRL3 753 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 HOMER2Q9NSB8 354 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 PLAAQ9Y263 795 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 PCDHB14Q9Y5E9 798 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 CD2APQ9Y5K6 639 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 CHD1O14646 1710 aa12.02□□□□□ -0.49
CD9-207ENST00000538418 CCDC194A0A1B0GVG4 234 aa12.01□□□□□ -0.49
CD9-207ENST00000538418 SPEM2Q0P670 501 aa12.01□□□□□ -0.49
CD9-207ENST00000538418 C6orf15Q6UXA7 325 aaPredicted RBP12.01□□□□□ -0.49
CD9-207ENST00000538418 FMNL3Q8IVF7 1028 aa12.01□□□□□ -0.49
CD9-207ENST00000538418 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
CD9-207ENST00000538418 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
CD9-207ENST00000538418 ZNF669Q96BR6 464 aaPredicted RBP12.01□□□□□ -0.49
CD9-207ENST00000538418 PBX4Q9BYU1 374 aa12.01□□□□□ -0.49
CD9-207ENST00000538418 CLEC4MQ9H2X3 399 aaPredicted RBP12.01□□□□□ -0.49
CD9-207ENST00000538418 B2RBV5 119 aa12□□□□□ -0.49
CD9-207ENST00000538418 TNP2Q05952 138 aa12□□□□□ -0.49
CD9-207ENST00000538418 LLGL2Q6P1M3 1020 aa12□□□□□ -0.49
CD9-207ENST00000538418 RUFY4Q6ZNE9 571 aa12□□□□□ -0.49
CD9-207ENST00000538418 FAM178BQ8IXR5 827 aa12□□□□□ -0.49
CD9-207ENST00000538418 BHMTQ93088 406 aa12□□□□□ -0.49
CD9-207ENST00000538418 RASSF4Q9H2L5 321 aa12□□□□□ -0.49
CD9-207ENST00000538418 SOS2Q07890 1332 aaPredicted RBP12□□□□□ -0.49
CD9-207ENST00000538418 CLASP1Q7Z460 1538 aa12□□□□□ -0.49
CD9-207ENST00000538418 ABCA10Q8WWZ4 1543 aa12□□□□□ -0.49
CD9-207ENST00000538418 LOC102724159A0A0B4J2E5 919 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 A0A1W2PQH9 124 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
CD9-207ENST00000538418 ATE1O95260 518 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 MAPTP10636 758 aaKnown RBP11.99□□□□□ -0.49
CD9-207ENST00000538418 PWP2Q15269 919 aaKnown RBP11.99□□□□□ -0.49
CD9-207ENST00000538418 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 SULF2Q8IWU5 870 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 ZSWIM2Q8NEG5 633 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 GAL3ST3Q96A11 431 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 CEP89Q96ST8 783 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 RBSNQ9H1K0 784 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 MARK1Q9P0L2 795 aa11.99□□□□□ -0.49
CD9-207ENST00000538418 POLR3KQ9Y2Y1 108 aaPredicted RBP11.99□□□□□ -0.49
CD9-207ENST00000538418 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
CD9-207ENST00000538418 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
CD9-207ENST00000538418 SIK1P57059 783 aa11.98□□□□□ -0.49
CD9-207ENST00000538418 RPL6Q02878 288 aaKnown RBP11.98□□□□□ -0.49
CD9-207ENST00000538418 MYH16Q9H6N6 1097 aa11.98□□□□□ -0.49
CD9-207ENST00000538418 B3GALT4O96024 378 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 THBS1P07996 1170 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 CNGA1P29973 690 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 ATP11AP98196 1134 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 MRM1Q6IN84 353 aaKnown RBP11.97□□□□□ -0.49
CD9-207ENST00000538418 TTC6Q86TZ1 520 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 GRIN3AQ8TCU5 1115 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 STK35Q8TDR2 534 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 SLC30A3Q99726 388 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 EMILIN2Q9BXX0 1053 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 CBX8Q9HC52 389 aa11.97□□□□□ -0.49
CD9-207ENST00000538418 J3QW42 95 aa11.96□□□□□ -0.49
CD9-207ENST00000538418 ARNTP27540 789 aa11.96□□□□□ -0.49
CD9-207ENST00000538418 SCARF1Q14162 830 aa11.96□□□□□ -0.49
CD9-207ENST00000538418 RAB44Q7Z6P3 723 aaPredicted RBP11.96□□□□□ -0.49
CD9-207ENST00000538418 JAMLQ86YT9 394 aa11.96□□□□□ -0.49
CD9-207ENST00000538418 BSNDQ8WZ55 320 aa11.96□□□□□ -0.49
CD9-207ENST00000538418 TM9SF2Q99805 663 aa11.96□□□□□ -0.49
CD9-207ENST00000538418 MAGEC2Q9UBF1 373 aaPredicted RBP11.96□□□□□ -0.49
CD9-207ENST00000538418 ATP8A1Q9Y2Q0 1164 aa11.96□□□□□ -0.49
CD9-207ENST00000538418 GRIN3BO60391 1043 aa11.95□□□□□ -0.5
CD9-207ENST00000538418 GUCY2CP25092 1073 aa11.95□□□□□ -0.5
CD9-207ENST00000538418 EVA1CP58658 441 aa11.95□□□□□ -0.5
CD9-207ENST00000538418 GPLD1P80108 840 aa11.95□□□□□ -0.5
CD9-207ENST00000538418 PCDH1Q08174 1060 aa11.95□□□□□ -0.5
CD9-207ENST00000538418 C21orf62-AS1Q17RA5 79 aa11.95□□□□□ -0.5
CD9-207ENST00000538418 TMEM67Q5HYA8 995 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms