RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 CCDC39Q9UFE4 941 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 MINPP1Q9UNW1 487 aa10.9□□□□□ -0.66
PTPRR-205ENST00000537619 UBAP1LF5GYI3 381 aa10.9□□□□□ -0.67
PTPRR-205ENST00000537619 UBE2Q2LH0YL09 131 aa10.9□□□□□ -0.67
PTPRR-205ENST00000537619 RANBP6O60518 1105 aaKnown RBP10.9□□□□□ -0.67
PTPRR-205ENST00000537619 SNW1Q13573 536 aaKnown RBP10.9□□□□□ -0.67
PTPRR-205ENST00000537619 NTRK3Q16288 839 aa10.9□□□□□ -0.67
PTPRR-205ENST00000537619 SLC10A5Q5PT55 438 aa10.9□□□□□ -0.67
PTPRR-205ENST00000537619 CCAR1Q8IX12 1150 aaKnown RBP10.9□□□□□ -0.67
PTPRR-205ENST00000537619 ENGASEQ8NFI3 743 aa10.9□□□□□ -0.67
PTPRR-205ENST00000537619 BSDC1Q9NW68 430 aaPredicted RBP10.9□□□□□ -0.67
PTPRR-205ENST00000537619 CLIC4Q9Y696 253 aa10.9□□□□□ -0.67
PTPRR-205ENST00000537619 CHD4Q14839 1912 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 ZNF500O60304 480 aaPredicted RBP10.89□□□□□ -0.67
PTPRR-205ENST00000537619 RPS6KA4O75676 772 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 METAP2P50579 478 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTPRR-205ENST00000537619 KIF23Q02241 960 aaPredicted RBP10.89□□□□□ -0.67
PTPRR-205ENST00000537619 UBE4AQ14139 1066 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 ANO6Q4KMQ2 910 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
PTPRR-205ENST00000537619 SGMS1Q86VZ5 419 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 MICU3Q86XE3 530 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 CCDC144CPQ8IYA2 1237 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 FAM200AQ8TCP9 573 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 STAG1Q8WVM7 1258 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 PHKBQ93100 1093 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 TMEM87BQ96K49 555 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 ZNF396Q96N95 335 aaPredicted RBP10.89□□□□□ -0.67
PTPRR-205ENST00000537619 CBX8Q9HC52 389 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 RTEL1Q9NZ71 1219 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 ZSWIM5Q9P217 1185 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 NARFQ9UHQ1 456 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTPRR-205ENST00000537619 SLC4A4Q9Y6R1 1079 aa10.89□□□□□ -0.67
PTPRR-205ENST00000537619 TNRC6CQ9HCJ0 1690 aaKnown RBP10.89□□□□□ -0.67
PTPRR-205ENST00000537619 CPLX1O14810 134 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 GNPATO15228 680 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 POLR3DP05423 398 aaPredicted RBP10.88□□□□□ -0.67
PTPRR-205ENST00000537619 CYP7A1P22680 504 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 MSNP26038 577 aaKnown RBP10.88□□□□□ -0.67
PTPRR-205ENST00000537619 TMEM67Q5HYA8 995 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 AKNAD1Q5T1N1 836 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 ATL3Q6DD88 541 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 LUZP1Q86V48 1076 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 LINC00301Q8NCQ3 95 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 FAM84BQ96KN1 310 aaPredicted RBP10.88□□□□□ -0.67
PTPRR-205ENST00000537619 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
PTPRR-205ENST00000537619 LRP2BPQ9P2M1 347 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 PCDHA7Q9UN72 937 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 A0A087WWV3 80 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 DHX16O60231 1041 aaKnown RBP10.88□□□□□ -0.67
PTPRR-205ENST00000537619 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 STK11IPQ8N1F8 1099 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 FSIP1Q8NA03 581 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 SDR42E1Q8WUS8 393 aa10.88□□□□□ -0.67
PTPRR-205ENST00000537619 ZNF830Q96NB3 372 aaPredicted RBP10.88□□□□□ -0.67
PTPRR-205ENST00000537619 RIOK1Q9BRS2 568 aaKnown RBP10.88□□□□□ -0.67
PTPRR-205ENST00000537619 NID2Q14112 1375 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 GOLGA8AA7E2F4 631 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 RGL2O15211 777 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 LIFRP42702 1097 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 TDO2P48775 406 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 DYNLL1P63167 89 aaKnown RBP10.87□□□□□ -0.67
PTPRR-205ENST00000537619 FBXO33Q7Z6M2 555 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 ZKSCAN3Q9BRR0 538 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 ALG1Q9BT22 464 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 ABCF2Q9UG63 623 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 USP21Q9UK80 565 aa10.87□□□□□ -0.67
PTPRR-205ENST00000537619 LY75O60449 1722 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 IFIT3O14879 490 aaKnown RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 ZBTB43O43298 467 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 PTMAP06454 111 aaKnown RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 GNAT2P19087 354 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 TM4SF1P30408 202 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 ME1P48163 572 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 EVX2Q03828 476 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 RRP12Q5JTH9 1297 aaKnown RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 C11orf57Q6ZUT1 292 aaPredicted RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 DNAJC25Q9H1X3 360 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 CCNL1Q9UK58 526 aaPredicted RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 IRS2Q9Y4H2 1338 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 TAF1LQ8IZX4 1826 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 CYP2D7A0A087X1C5 515 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 OFD1O75665 1012 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 FAM160A1Q05DH4 1040 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 PPARAQ07869 468 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 KRT40Q6A162 431 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 MFSD6Q6ZSS7 791 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 BRAPQ7Z569 592 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 FMR1NBQ8N0W7 255 aaPredicted RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 TDRD7Q8NHU6 1098 aaKnown RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 NAP1L5Q96NT1 182 aaPredicted RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 TTC12Q9H892 705 aaPredicted RBP10.86□□□□□ -0.67
PTPRR-205ENST00000537619 POLR3EQ9NVU0 708 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 RAI14Q9P0K7 980 aa10.86□□□□□ -0.67
PTPRR-205ENST00000537619 MROH7-TTC4A0A0A0MT08 1334 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms