RNA–Protein interactions for RNA: ENST00000536769.1

UBC-205, Transcript of ubiquitin C, humanhuman

APPRIS P1 BASIC

Gene UBC, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-205ENST00000536769 ZSWIM5Q9P217 1185 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 POLR3GO15318 223 aaPredicted RBP17.41■□□□□ 0.38
UBC-205ENST00000536769 NLRP10Q86W26 655 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 SPATA5Q8NB90 893 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBC-205ENST00000536769 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
UBC-205ENST00000536769 NRXN3Q9Y4C0 1643 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 CDC27P30260 824 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 FANCCQ00597 558 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 ELF2Q15723 593 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 PRDM4Q9UKN5 801 aa17.41■□□□□ 0.38
UBC-205ENST00000536769 FOXN1O15353 648 aa17.4■□□□□ 0.38
UBC-205ENST00000536769 PDE8BO95263 885 aa17.4■□□□□ 0.38
UBC-205ENST00000536769 ATP2B2Q01814 1243 aa17.4■□□□□ 0.38
UBC-205ENST00000536769 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
UBC-205ENST00000536769 KCNH3Q9ULD8 1083 aa17.4■□□□□ 0.38
UBC-205ENST00000536769 XBP1P17861 261 aa17.39■□□□□ 0.38
UBC-205ENST00000536769 TEX35Q5T0J7 233 aa17.39■□□□□ 0.38
UBC-205ENST00000536769 SMAP1Q8IYB5 467 aaPredicted RBP17.39■□□□□ 0.38
UBC-205ENST00000536769 IFNL3Q8IZI9 196 aa17.39■□□□□ 0.38
UBC-205ENST00000536769 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.38
UBC-205ENST00000536769 FANCLQ9NW38 375 aa17.39■□□□□ 0.38
UBC-205ENST00000536769 ZNF335Q9H4Z2 1342 aaPredicted RBP17.39■□□□□ 0.38
UBC-205ENST00000536769 ERCC3P19447 782 aa17.39■□□□□ 0.37
UBC-205ENST00000536769 ADKP55263 362 aaKnown RBP17.39■□□□□ 0.37
UBC-205ENST00000536769 GNG11P61952 73 aa17.39■□□□□ 0.37
UBC-205ENST00000536769 EXOSC10Q01780 885 aaKnown RBP17.39■□□□□ 0.37
UBC-205ENST00000536769 FAM47AQ5JRC9 791 aa17.39■□□□□ 0.37
UBC-205ENST00000536769 USPL1Q5W0Q7 1092 aa17.39■□□□□ 0.37
UBC-205ENST00000536769 TEX13AQ9BXU3 409 aaPredicted RBP17.39■□□□□ 0.37
UBC-205ENST00000536769 C3P01024 1663 aa17.39■□□□□ 0.37
UBC-205ENST00000536769 WDR17Q8IZU2 1322 aa17.39■□□□□ 0.37
UBC-205ENST00000536769 WTIPA6NIX2 430 aaPredicted RBP17.39■□□□□ 0.37
UBC-205ENST00000536769 APOA5Q6Q788 366 aa17.39■□□□□ 0.37
UBC-205ENST00000536769 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
UBC-205ENST00000536769 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
UBC-205ENST00000536769 CDC25AP30304 524 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 UBXN4Q92575 508 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
UBC-205ENST00000536769 MARCH6O60337 910 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
UBC-205ENST00000536769 ATG3Q9NT62 314 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 GNL3LQ9NVN8 582 aaKnown RBP17.38■□□□□ 0.37
UBC-205ENST00000536769 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 SH3TC1Q8TE82 1336 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 MEGF6O75095 1541 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 PDE8AO60658 829 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 TNNT3P45378 269 aaPredicted RBP17.38■□□□□ 0.37
UBC-205ENST00000536769 SMARCE1Q969G3 411 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 PCDHA5Q9Y5H7 936 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 UTYO14607 1347 aa17.38■□□□□ 0.37
UBC-205ENST00000536769 WDHD1O75717 1129 aaPredicted RBP17.37■□□□□ 0.37
UBC-205ENST00000536769 GUCY1A2P33402 732 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 SMYD4Q8IYR2 804 aaPredicted RBP17.37■□□□□ 0.37
UBC-205ENST00000536769 LZTFL1Q9NQ48 299 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 SMIM22K7EJ46 135 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 NLRP5P59047 1200 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 KIF23Q02241 960 aaPredicted RBP17.37■□□□□ 0.37
UBC-205ENST00000536769 STX8Q9UNK0 236 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 UQCRFS1P1P0C7P4 283 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
UBC-205ENST00000536769 LONRF3Q496Y0 759 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 LCORLQ8N3X6 602 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
UBC-205ENST00000536769 VWA3AA6NCI4 1184 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 DYNLL1P63167 89 aaKnown RBP17.36■□□□□ 0.37
UBC-205ENST00000536769 DDB1Q16531 1140 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 ERCC6LQ2NKX8 1250 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 PPFIBP1Q86W92 1011 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 SMARCC2Q8TAQ2 1214 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 ANTXR2P58335 489 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 IFIT1BQ5T764 474 aaKnown RBP17.36■□□□□ 0.37
UBC-205ENST00000536769 BRAPQ7Z569 592 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 ANKIB1Q9P2G1 1089 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 TSPY2A6NKD2 308 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 ADD2P35612 726 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 BRMS1Q9HCU9 246 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 AATFQ9NY61 560 aaKnown RBP eCLIP17.36■□□□□ 0.379e-7■■□□□ 13.5
UBC-205ENST00000536769 C1orf167Q5SNV9 1468 aa17.36■□□□□ 0.37
UBC-205ENST00000536769 MAP3K15Q6ZN16 1313 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 MCM7P33993 719 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 IQCA1Q86XH1 822 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 LPIN2Q92539 896 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 KCNB2Q92953 911 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 NEDD4P46934 1319 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 CCT6AP40227 531 aaKnown RBP17.35■□□□□ 0.37
UBC-205ENST00000536769 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 SUSD4Q5VX71 490 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 TSGA10IPQ3SY00 556 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 ZFP91Q96JP5 570 aaPredicted RBP17.35■□□□□ 0.37
UBC-205ENST00000536769 NFE2L3Q9Y4A8 694 aa17.35■□□□□ 0.37
UBC-205ENST00000536769 CASP7P55210 303 aa17.34■□□□□ 0.37
UBC-205ENST00000536769 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
UBC-205ENST00000536769 MAGEB6P1A0A0J9YX57 407 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms