RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
CLIP1-207ENST00000536634 GNA15P30679 374 aa9.36□□□□□ -0.91
CLIP1-207ENST00000536634 GSTT1P30711 240 aa9.36□□□□□ -0.91
CLIP1-207ENST00000536634 PREPP48147 710 aa9.36□□□□□ -0.91
CLIP1-207ENST00000536634 SRCIN1Q9C0H9 1055 aa9.36□□□□□ -0.91
CLIP1-207ENST00000536634 GPN3Q9UHW5 284 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-207ENST00000536634 GIPC1O14908 333 aa9.35□□□□□ -0.91
CLIP1-207ENST00000536634 USP17L7P0C7H9 530 aa9.35□□□□□ -0.91
CLIP1-207ENST00000536634 NUTM2GQ5VZR2 741 aa9.35□□□□□ -0.91
CLIP1-207ENST00000536634 ANKRD34AQ69YU3 496 aa9.35□□□□□ -0.91
CLIP1-207ENST00000536634 FDX2Q6P4F2 183 aa9.35□□□□□ -0.91
CLIP1-207ENST00000536634 DDX54Q8TDD1 881 aaKnown RBP9.35□□□□□ -0.91
CLIP1-207ENST00000536634 ZFYVE1Q9HBF4 777 aa9.35□□□□□ -0.91
CLIP1-207ENST00000536634 GRIN2BQ13224 1484 aa9.34□□□□□ -0.91
CLIP1-207ENST00000536634 FBXO24O75426 580 aa9.34□□□□□ -0.91
CLIP1-207ENST00000536634 EXOSC6Q5RKV6 272 aaKnown RBP9.34□□□□□ -0.91
CLIP1-207ENST00000536634 TPTE2Q6XPS3 522 aa9.34□□□□□ -0.91
CLIP1-207ENST00000536634 PRR23CQ6ZRP0 262 aa9.34□□□□□ -0.91
CLIP1-207ENST00000536634 STK35Q8TDR2 534 aa9.34□□□□□ -0.91
CLIP1-207ENST00000536634 CORO1BQ9BR76 489 aa9.34□□□□□ -0.91
CLIP1-207ENST00000536634 TMEM39AQ9NV64 488 aa9.34□□□□□ -0.91
CLIP1-207ENST00000536634 PBRM1Q86U86 1689 aa9.34□□□□□ -0.91
CLIP1-207ENST00000536634 EIF4EBP3O60516 100 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-207ENST00000536634 TIAF1O95411 115 aa9.33□□□□□ -0.92
CLIP1-207ENST00000536634 DRD2P14416 443 aa9.33□□□□□ -0.92
CLIP1-207ENST00000536634 AP3B2Q13367 1082 aa9.33□□□□□ -0.92
CLIP1-207ENST00000536634 SMG8Q8ND04 991 aaKnown RBP9.33□□□□□ -0.92
CLIP1-207ENST00000536634 UTP4Q969X6 686 aaKnown RBP9.33□□□□□ -0.92
CLIP1-207ENST00000536634 SUGCTQ9HAC7 445 aa9.33□□□□□ -0.92
CLIP1-207ENST00000536634 FAM8A1Q9UBU6 413 aa9.33□□□□□ -0.92
CLIP1-207ENST00000536634 PARP2Q9UGN5 583 aa9.33□□□□□ -0.92
CLIP1-207ENST00000536634 CUX1P39880 1505 aa9.32□□□□□ -0.92
CLIP1-207ENST00000536634 EIF4BP23588 611 aaKnown RBP9.32□□□□□ -0.92
CLIP1-207ENST00000536634 PPP2R3AQ06190 1150 aa9.32□□□□□ -0.92
CLIP1-207ENST00000536634 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
CLIP1-207ENST00000536634 C12orf50Q8NA57 414 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-207ENST00000536634 FAM161BQ96MY7 647 aa9.32□□□□□ -0.92
CLIP1-207ENST00000536634 FRMD6Q96NE9 622 aa9.32□□□□□ -0.92
CLIP1-207ENST00000536634 ZC3H12CQ9C0D7 883 aaKnown RBP9.32□□□□□ -0.92
CLIP1-207ENST00000536634 KIF13AQ9H1H9 1805 aa9.31□□□□□ -0.92
CLIP1-207ENST00000536634 SART1O43290 800 aaKnown RBP9.31□□□□□ -0.92
CLIP1-207ENST00000536634 TRIM26Q12899 539 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-207ENST00000536634 UVSSAQ2YD98 709 aa9.31□□□□□ -0.92
CLIP1-207ENST00000536634 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-207ENST00000536634 MYRFLQ96LU7 910 aa9.31□□□□□ -0.92
CLIP1-207ENST00000536634 NECAB3Q96P71 396 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-207ENST00000536634 CCDC86Q9H6F5 360 aaKnown RBP9.31□□□□□ -0.92
CLIP1-207ENST00000536634 CYP4F12Q9HCS2 524 aa9.31□□□□□ -0.92
CLIP1-207ENST00000536634 AK5Q9Y6K8 562 aa9.31□□□□□ -0.92
CLIP1-207ENST00000536634 ENC1O14682 589 aa9.3□□□□□ -0.92
CLIP1-207ENST00000536634 PAGE1O75459 146 aa9.3□□□□□ -0.92
CLIP1-207ENST00000536634 ERCC3P19447 782 aa9.3□□□□□ -0.92
CLIP1-207ENST00000536634 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
CLIP1-207ENST00000536634 PRSS36Q5K4E3 855 aa9.3□□□□□ -0.92
CLIP1-207ENST00000536634 PDZD3Q86UT5 571 aa9.3□□□□□ -0.92
CLIP1-207ENST00000536634 SULF2Q8IWU5 870 aa9.3□□□□□ -0.92
CLIP1-207ENST00000536634 WDR89Q96FK6 387 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-207ENST00000536634 PPM1HQ9ULR3 514 aa9.3□□□□□ -0.92
CLIP1-207ENST00000536634 DHX15O43143 795 aaKnown RBP9.29□□□□□ -0.92
CLIP1-207ENST00000536634 GSTP1P09211 210 aaKnown RBP9.29□□□□□ -0.92
CLIP1-207ENST00000536634 ADH5P11766 374 aa9.29□□□□□ -0.92
CLIP1-207ENST00000536634 BMP3P12645 472 aa9.29□□□□□ -0.92
CLIP1-207ENST00000536634 DAB2P98082 770 aa9.29□□□□□ -0.92
CLIP1-207ENST00000536634 FGD1P98174 961 aa9.29□□□□□ -0.92
CLIP1-207ENST00000536634 C2CD4AQ8NCU7 369 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-207ENST00000536634 WDR18Q9BV38 432 aa9.29□□□□□ -0.92
CLIP1-207ENST00000536634 ZNF862O60290 1169 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 CELA3AP09093 270 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 LIG1P18858 919 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 SOX4Q06945 474 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-207ENST00000536634 PSMD2Q13200 908 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 SGO2Q562F6 1265 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 AKAP4Q5JQC9 854 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 FAM20CQ8IXL6 584 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 RAXQ9Y2V3 346 aa9.28□□□□□ -0.92
CLIP1-207ENST00000536634 ABCA5Q8WWZ7 1642 aa9.27□□□□□ -0.92
CLIP1-207ENST00000536634 GAS2O43903 313 aaKnown RBP9.27□□□□□ -0.93
CLIP1-207ENST00000536634 AOC2O75106 756 aa9.27□□□□□ -0.93
CLIP1-207ENST00000536634 NME2P22392 152 aa9.27□□□□□ -0.93
CLIP1-207ENST00000536634 ARNTP27540 789 aa9.27□□□□□ -0.93
CLIP1-207ENST00000536634 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-207ENST00000536634 RASIP1Q5U651 963 aa9.27□□□□□ -0.93
CLIP1-207ENST00000536634 CEP44Q9C0F1 390 aa9.27□□□□□ -0.93
CLIP1-207ENST00000536634 RAD18Q9NS91 495 aa9.27□□□□□ -0.93
CLIP1-207ENST00000536634 TTF2Q9UNY4 1162 aaKnown RBP9.27□□□□□ -0.93
CLIP1-207ENST00000536634 CEP170Q5SW79 1584 aa9.27□□□□□ -0.93
CLIP1-207ENST00000536634 MFAP1P55081 439 aaKnown RBP9.26□□□□□ -0.93
CLIP1-207ENST00000536634 XPCQ01831 940 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-207ENST00000536634 MPRIPQ6WCQ1 1025 aa9.26□□□□□ -0.93
CLIP1-207ENST00000536634 TMC4Q7Z404 712 aa9.26□□□□□ -0.93
CLIP1-207ENST00000536634 KCNB2Q92953 911 aa9.26□□□□□ -0.93
CLIP1-207ENST00000536634 KCNF1Q9H3M0 494 aa9.26□□□□□ -0.93
CLIP1-207ENST00000536634 C7orf69Q9H7B7 122 aa9.26□□□□□ -0.93
CLIP1-207ENST00000536634 STOML1Q9UBI4 398 aa9.26□□□□□ -0.93
CLIP1-207ENST00000536634 ACTL7BQ9Y614 415 aa9.26□□□□□ -0.93
CLIP1-207ENST00000536634 HMX2A2RU54 273 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 FSTP19883 344 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 BMP6P22004 513 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 ZNF252P-AS1Q0IIN9 211 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms