RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 FERMT3Q86UX7 667 aa26.69■■□□□ 1.86
HMGA2-206ENST00000536545 FAM184AQ8NB25 1140 aa26.69■■□□□ 1.86
HMGA2-206ENST00000536545 STAG1Q8WVM7 1258 aa26.69■■□□□ 1.86
HMGA2-206ENST00000536545 NSUN4Q96CB9 384 aaKnown RBP26.69■■□□□ 1.86
HMGA2-206ENST00000536545 AKNAD1Q5T1N1 836 aa26.69■■□□□ 1.86
HMGA2-206ENST00000536545 KIF3AQ9Y496 699 aa26.69■■□□□ 1.86
HMGA2-206ENST00000536545 RGPD3A6NKT7 1758 aaPredicted RBP26.68■■□□□ 1.86
HMGA2-206ENST00000536545 RGPD4Q7Z3J3 1758 aa26.68■■□□□ 1.86
HMGA2-206ENST00000536545 ANKRD31Q8N7Z5 1873 aa26.68■■□□□ 1.86
HMGA2-206ENST00000536545 KLRG2A4D1S0 409 aaPredicted RBP26.68■■□□□ 1.86
HMGA2-206ENST00000536545 XRCC6P12956 609 aaKnown RBP eCLIP26.68■■□□□ 1.86
HMGA2-206ENST00000536545 HOXA10P31260 410 aaPredicted RBP26.68■■□□□ 1.86
HMGA2-206ENST00000536545 RESTQ13127 1097 aa26.68■■□□□ 1.86
HMGA2-206ENST00000536545 CSPP1Q1MSJ5 1256 aa26.68■■□□□ 1.86
HMGA2-206ENST00000536545 RBM17Q96I25 401 aaKnown RBP26.68■■□□□ 1.86
HMGA2-206ENST00000536545 TMEM87BQ96K49 555 aa26.68■■□□□ 1.86
HMGA2-206ENST00000536545 CNNM2Q9H8M5 875 aa26.68■■□□□ 1.86
HMGA2-206ENST00000536545 MECOMQ03112 1051 aa26.67■■□□□ 1.86
HMGA2-206ENST00000536545 TMED8Q6PL24 325 aaPredicted RBP26.67■■□□□ 1.86
HMGA2-206ENST00000536545 GRPEL1Q9HAV7 217 aa26.67■■□□□ 1.86
HMGA2-206ENST00000536545 APBA3O96018 575 aa26.66■■□□□ 1.86
HMGA2-206ENST00000536545 CHAF1AQ13111 956 aaPredicted RBP26.66■■□□□ 1.86
HMGA2-206ENST00000536545 LTBP1Q14766 1721 aa26.66■■□□□ 1.86
HMGA2-206ENST00000536545 UBE2HP62256 183 aa26.66■■□□□ 1.86
HMGA2-206ENST00000536545 DYNLL1P63167 89 aaKnown RBP26.66■■□□□ 1.86
HMGA2-206ENST00000536545 GPSM2P81274 684 aa26.66■■□□□ 1.86
HMGA2-206ENST00000536545 SDR42E1Q8WUS8 393 aa26.66■■□□□ 1.86
HMGA2-206ENST00000536545 KRT23Q9C075 422 aa26.66■■□□□ 1.86
HMGA2-206ENST00000536545 INCENPQ9NQS7 918 aa26.66■■□□□ 1.86
HMGA2-206ENST00000536545 CCDC88AQ3V6T2 1871 aa26.65■■□□□ 1.86
HMGA2-206ENST00000536545 DUOX1Q9NRD9 1551 aa26.65■■□□□ 1.86
HMGA2-206ENST00000536545 PRDX5P30044 214 aa26.65■■□□□ 1.86
HMGA2-206ENST00000536545 KRT85P78386 507 aa26.65■■□□□ 1.86
HMGA2-206ENST00000536545 IGDCC4Q8TDY8 1250 aa26.65■■□□□ 1.86
HMGA2-206ENST00000536545 ANAPC4Q9UJX5 808 aa26.65■■□□□ 1.86
HMGA2-206ENST00000536545 H3BQV1 296 aa26.64■■□□□ 1.86
HMGA2-206ENST00000536545 PPARAQ07869 468 aa26.64■■□□□ 1.86
HMGA2-206ENST00000536545 IFFO2Q5TF58 517 aa26.64■■□□□ 1.86
HMGA2-206ENST00000536545 MFSD6Q6ZSS7 791 aa26.64■■□□□ 1.86
HMGA2-206ENST00000536545 SGMS1Q86VZ5 419 aa26.64■■□□□ 1.86
HMGA2-206ENST00000536545 CRAMP1Q96RY5 1269 aa26.64■■□□□ 1.86
HMGA2-206ENST00000536545 BRIP1Q9BX63 1249 aa26.64■■□□□ 1.86
HMGA2-206ENST00000536545 LY9Q9HBG7 655 aa26.64■■□□□ 1.86
HMGA2-206ENST00000536545 DHX16O60231 1041 aaKnown RBP26.63■■□□□ 1.85
HMGA2-206ENST00000536545 FDPSP14324 419 aaKnown RBP26.63■■□□□ 1.85
HMGA2-206ENST00000536545 COL23A1Q86Y22 540 aaPredicted RBP26.63■■□□□ 1.85
HMGA2-206ENST00000536545 TDRD7Q8NHU6 1098 aaKnown RBP26.63■■□□□ 1.85
HMGA2-206ENST00000536545 IGSF3O75054 1194 aa26.63■■□□□ 1.85
HMGA2-206ENST00000536545 KDM4AO75164 1064 aa26.63■■□□□ 1.85
HMGA2-206ENST00000536545 RXRBP28702 533 aa26.63■■□□□ 1.85
HMGA2-206ENST00000536545 FAM173BQ6P4H8 233 aa26.63■■□□□ 1.85
HMGA2-206ENST00000536545 ELP1O95163 1332 aa26.63■■□□□ 1.85
HMGA2-206ENST00000536545 MYH15Q9Y2K3 1946 aa26.62■■□□□ 1.85
HMGA2-206ENST00000536545 BBOX1O75936 387 aa26.62■■□□□ 1.85
HMGA2-206ENST00000536545 GIMAP6Q6P9H5 292 aa26.62■■□□□ 1.85
HMGA2-206ENST00000536545 APOA5Q6Q788 366 aa26.62■■□□□ 1.85
HMGA2-206ENST00000536545 ZNF804AQ7Z570 1209 aa26.62■■□□□ 1.85
HMGA2-206ENST00000536545 SYAP1Q96A49 352 aaPredicted RBP26.62■■□□□ 1.85
HMGA2-206ENST00000536545 RNF41Q9H4P4 317 aaPredicted RBP26.62■■□□□ 1.85
HMGA2-206ENST00000536545 ZSCAN16Q9H4T2 348 aaPredicted RBP26.62■■□□□ 1.85
HMGA2-206ENST00000536545 SENP2Q9HC62 589 aa26.62■■□□□ 1.85
HMGA2-206ENST00000536545 ZSWIM5Q9P217 1185 aa26.62■■□□□ 1.85
HMGA2-206ENST00000536545 LAMB1P07942 1786 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 ATP2B4P23634 1241 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 LIFRP42702 1097 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 RAB11FIP4Q86YS3 637 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 UFL1O94874 794 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 TMEM67Q5HYA8 995 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 SPTY2D1Q68D10 685 aaPredicted RBP26.61■■□□□ 1.85
HMGA2-206ENST00000536545 NLGN1Q8N2Q7 840 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 WDR66Q8TBY9 1149 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 GPR101Q96P66 508 aaPredicted RBP26.61■■□□□ 1.85
HMGA2-206ENST00000536545 PODXL2Q9NZ53 605 aa26.61■■□□□ 1.85
HMGA2-206ENST00000536545 BAZ2AQ9UIF9 1905 aaKnown RBP26.6■■□□□ 1.85
HMGA2-206ENST00000536545 NID2Q14112 1375 aa26.6■■□□□ 1.85
HMGA2-206ENST00000536545 TTC6Q86TZ1 520 aa26.6■■□□□ 1.85
HMGA2-206ENST00000536545 MTA3Q9BTC8 594 aa26.6■■□□□ 1.85
HMGA2-206ENST00000536545 JAG2Q9Y219 1238 aa26.6■■□□□ 1.85
HMGA2-206ENST00000536545 FLAD1Q8NFF5 587 aa26.59■■□□□ 1.85
HMGA2-206ENST00000536545 GGA1Q9UJY5 639 aa26.59■■□□□ 1.85
HMGA2-206ENST00000536545 METAP2P50579 478 aaKnown RBP eCLIP26.58■■□□□ 1.85
HMGA2-206ENST00000536545 PANK2Q9BZ23 570 aa26.58■■□□□ 1.85
HMGA2-206ENST00000536545 SCAND2PQ9GZW5 306 aaPredicted RBP26.58■■□□□ 1.85
HMGA2-206ENST00000536545 IFIT3O14879 490 aaKnown RBP26.58■■□□□ 1.85
HMGA2-206ENST00000536545 PPFIA3O75145 1194 aa26.58■■□□□ 1.85
HMGA2-206ENST00000536545 FOSBP53539 338 aa26.58■■□□□ 1.85
HMGA2-206ENST00000536545 TMC4Q7Z404 712 aa26.58■■□□□ 1.85
HMGA2-206ENST00000536545 COL11A2P13942 1736 aaPredicted RBP26.57■■□□□ 1.84
HMGA2-206ENST00000536545 SYCE3A1L190 88 aa26.57■■□□□ 1.84
HMGA2-206ENST00000536545 CPLX1O14810 134 aa26.57■■□□□ 1.84
HMGA2-206ENST00000536545 DZIP1Q86YF9 867 aaKnown RBP26.57■■□□□ 1.84
HMGA2-206ENST00000536545 CRNKL1Q9BZJ0 848 aaKnown RBP26.57■■□□□ 1.84
HMGA2-206ENST00000536545 AATFQ9NY61 560 aaKnown RBP eCLIP26.57■■□□□ 1.84
HMGA2-206ENST00000536545 MINDY4BA8MYZ0 360 aa26.56■■□□□ 1.84
HMGA2-206ENST00000536545 RRP12Q5JTH9 1297 aaKnown RBP26.56■■□□□ 1.84
HMGA2-206ENST00000536545 LRSAM1Q6UWE0 723 aa26.56■■□□□ 1.84
HMGA2-206ENST00000536545 ORC3Q9UBD5 711 aaPredicted RBP26.56■■□□□ 1.84
HMGA2-206ENST00000536545 ECM29Q5VYK3 1845 aa26.56■■□□□ 1.84
HMGA2-206ENST00000536545 ZBTB43O43298 467 aa26.56■■□□□ 1.84
HMGA2-206ENST00000536545 NFXL1Q6ZNB6 911 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms