RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 MAP7D2Q96T17 732 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 UNC93B1Q9H1C4 597 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 DDX21Q9NR30 783 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS33A-203ENST00000536212 MAP3K2Q9Y2U5 619 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 COL15A1P39059 1388 aa6.82□□□□□ -1.32
VPS33A-203ENST00000536212 PXDNQ92626 1479 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 SOBPA7XYQ1 873 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 DYNC1I1O14576 645 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 SASH1O94885 1247 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 ANXA1P04083 346 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 IFIT2P09913 472 aaKnown RBP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 CASTP20810 708 aaKnown RBP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 CDK11BP21127 795 aaKnown RBP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 PSMA5P28066 241 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 GJB2P29033 226 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 OS9Q13438 667 aaPredicted RBP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 ME3Q16798 604 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 PROSER3Q2NL68 480 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 C1orf141Q5JVX7 400 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 CREB3L3Q68CJ9 461 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 SASS6Q6UVJ0 657 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 JAKMIP1Q96N16 626 aaKnown RBP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 ARHGAP9Q9BRR9 750 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 C9orf78Q9NZ63 289 aaPredicted RBP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 BCCIPQ9P287 314 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 SPG7Q9UQ90 795 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 USTQ9Y2C2 406 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 R3HCC1Q9Y3T6 440 aaKnown RBP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 PCDHB9Q9Y5E1 797 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 RBM8AQ9Y5S9 174 aaKnown RBP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 CYP46A1Q9Y6A2 500 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS33A-203ENST00000536212 LTN1O94822 1766 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 RFX7Q2KHR2 1363 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 PLEKHG2Q9H7P9 1386 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 MED23Q9ULK4 1368 aa6.81□□□□□ -1.32
VPS33A-203ENST00000536212 ELP1O95163 1332 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 FER1L4A9Z1Z3 1794 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 PIK3CDO00329 1044 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 SLC27A2O14975 620 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 NPHP4O75161 1426 aaPredicted RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 DDX58O95786 925 aaKnown RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 IGHA1P01876 353 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 GCP02774 474 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 TIMP2P16035 220 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 ZKSCAN1P17029 563 aaPredicted RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 KIAA2012Q0VF49 1180 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 G3BP1Q13283 466 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 NMIQ13287 307 aaPredicted RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 ANKRD1Q15327 319 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 USPL1Q5W0Q7 1092 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 PRPF40BQ6NWY9 871 aaKnown RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 MPRIPQ6WCQ1 1025 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 AACSQ86V21 672 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 ANKLE2Q86XL3 938 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 CCDC83Q8IWF9 413 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 PIBF1Q8WXW3 757 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 LRRC59Q96AG4 307 aaKnown RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 EAF2Q96CJ1 260 aaPredicted RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 OCSTAMPQ9BR26 566 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 SPTLC3Q9NUV7 552 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 HMG20BQ9P0W2 317 aa6.8□□□□□ -1.32
VPS33A-203ENST00000536212 PA2G4Q9UQ80 394 aaKnown RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 CHD2O14647 1828 aaKnown RBP6.8□□□□□ -1.32
VPS33A-203ENST00000536212 UQCRHLA0A096LP55 91 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 PPFIA3O75145 1194 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 ATG7O95352 703 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 ADCY5O95622 1261 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 ADH1CP00326 375 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 IGKV5-2P06315 115 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 PTMAP06454 111 aaKnown RBP6.79□□□□□ -1.32
VPS33A-203ENST00000536212 TPM3P06753 285 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 UQCRHP07919 91 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 SKIP12755 728 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 HCLS1P14317 486 aaPredicted RBP6.79□□□□□ -1.32
VPS33A-203ENST00000536212 CPA1P15085 419 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 PDCP20941 246 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 RPS6KB1P23443 525 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 DNM1Q05193 864 aaKnown RBP6.79□□□□□ -1.32
VPS33A-203ENST00000536212 PSME1Q06323 249 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 NNTQ13423 1086 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 CWF19L2Q2TBE0 894 aaKnown RBP6.79□□□□□ -1.32
VPS33A-203ENST00000536212 SLFNL1Q499Z3 407 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 LARP1Q6PKG0 1096 aaKnown RBP6.79□□□□□ -1.32
VPS33A-203ENST00000536212 SH3BP5LQ7L8J4 393 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 MTERF4Q7Z6M4 381 aaKnown RBP6.79□□□□□ -1.32
VPS33A-203ENST00000536212 ZBTB33Q86T24 672 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 TICAM2Q86XR7 235 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 ADAM32Q8TC27 787 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 ANKRD24Q8TF21 1146 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 FAM227BQ96M60 508 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 BICC1Q9H694 974 aaKnown RBP6.79□□□□□ -1.32
VPS33A-203ENST00000536212 COPRSQ9NQ92 184 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 CEP126Q9P2H0 1117 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 USP25Q9UHP3 1055 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 TPCN1Q9ULQ1 816 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 TLL2Q9Y6L7 1015 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.79□□□□□ -1.32
VPS33A-203ENST00000536212 ABCC6O95255 1503 aa6.79□□□□□ -1.32
VPS33A-203ENST00000536212 SIPA1L3O60292 1781 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms