RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 RTKN2Q8IZC4 609 aa24.14■■□□□ 1.46
TNFRSF1A-205ENST00000534885 SUPT20HQ8NEM7 779 aa24.14■■□□□ 1.46
TNFRSF1A-205ENST00000534885 NACAP1Q9BZK3 213 aa24.14■■□□□ 1.46
TNFRSF1A-205ENST00000534885 MROH7-TTC4A0A0A0MT08 1334 aa24.13■■□□□ 1.45
TNFRSF1A-205ENST00000534885 GRIPAP1Q4V328 841 aa24.13■■□□□ 1.45
TNFRSF1A-205ENST00000534885 CD2APQ9Y5K6 639 aa24.13■■□□□ 1.45
TNFRSF1A-205ENST00000534885 ZNF646O15015 1829 aaPredicted RBP24.13■■□□□ 1.45
TNFRSF1A-205ENST00000534885 PPIP5K2O43314 1243 aa24.12■■□□□ 1.45
TNFRSF1A-205ENST00000534885 LIMCH1Q9UPQ0 1083 aa24.12■■□□□ 1.45
TNFRSF1A-205ENST00000534885 HMGB1P09429 215 aaKnown RBP24.12■■□□□ 1.45
TNFRSF1A-205ENST00000534885 TOB2Q14106 344 aaPredicted RBP24.12■■□□□ 1.45
TNFRSF1A-205ENST00000534885 DALRD3Q5D0E6 543 aaKnown RBP24.12■■□□□ 1.45
TNFRSF1A-205ENST00000534885 PSMD1Q99460 953 aa24.12■■□□□ 1.45
TNFRSF1A-205ENST00000534885 ILDR2Q71H61 639 aa24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 DHX32Q7L7V1 743 aaKnown RBP24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 LRRC2Q9BYS8 371 aa24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 CRNKL1Q9BZJ0 848 aaKnown RBP24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 F8W031 263 aaPredicted RBP24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 LARGE1O95461 756 aa24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 LDHCP07864 332 aa24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 DDIT3P35638 169 aa24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 CTDSPL2Q05D32 466 aa24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 ALDH8A1Q9H2A2 487 aaPredicted RBP24.11■■□□□ 1.45
TNFRSF1A-205ENST00000534885 EXOSC10Q01780 885 aaKnown RBP24.1■■□□□ 1.45
TNFRSF1A-205ENST00000534885 CUL4AQ13619 759 aa24.1■■□□□ 1.45
TNFRSF1A-205ENST00000534885 ZNF277Q9NRM2 450 aaPredicted RBP24.1■■□□□ 1.45
TNFRSF1A-205ENST00000534885 TIAM2Q8IVF5 1701 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 CHST3Q7LGC8 479 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 NKX2-3Q8TAU0 364 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 SH3RF3Q8TEJ3 882 aaPredicted RBP24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 SUGT1Q9Y2Z0 365 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 PPP4CP60510 307 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 Q6ZUG5 572 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 INCENPQ9NQS7 918 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 TPCN1Q9ULQ1 816 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 TACC3Q9Y6A5 838 aa24.09■■□□□ 1.45
TNFRSF1A-205ENST00000534885 SMIM22K7EJ46 135 aa24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 BAG3O95817 575 aa24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 BTDP43251 543 aa24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 SOGA3Q5TF21 947 aa24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 STRIP1Q5VSL9 837 aa24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 MB21D2Q8IYB1 491 aaPredicted RBP24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 NCOA7Q8NI08 942 aa24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 DCP1AQ9NPI6 582 aaPredicted RBP24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 TTF2Q9UNY4 1162 aaKnown RBP24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 SRCAPQ6ZRS2 3230 aa24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 COL4A5P29400 1685 aa24.08■■□□□ 1.45
TNFRSF1A-205ENST00000534885 GAKO14976 1311 aa24.08■■□□□ 1.44
TNFRSF1A-205ENST00000534885 NEDD4P46934 1319 aa24.08■■□□□ 1.44
TNFRSF1A-205ENST00000534885 YDJCA8MPS7 323 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 ANKRD1Q15327 319 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 DACT2Q5SW24 774 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 RALYLQ86SE5 291 aaKnown RBP24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 FAM163AQ96GL9 167 aaPredicted RBP24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 NOL10Q9BSC4 688 aaKnown RBP24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 UTRNP46939 3433 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 ADAMTSL1Q8N6G6 1762 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 CDK5RAP2Q96SN8 1893 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 GPR75-ASB3A0A0A6YYF3 556 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 ME3Q16798 604 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 GIMAP6Q6P9H5 292 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 FER1L6Q2WGJ9 1857 aa24.07■■□□□ 1.44
TNFRSF1A-205ENST00000534885 CYP2D7A0A087X1C5 515 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 USP17L3A6NCW0 530 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 USP17L4A6NCW7 530 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 MINDY4BA8MYZ0 360 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 PPARAQ07869 468 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 USP17L1Q7RTZ2 530 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 SLF2Q8IX21 1173 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 STK11IPQ8N1F8 1099 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 NLGN2Q8NFZ4 835 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 ATP8A2Q9NTI2 1148 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 DAGLAQ9Y4D2 1042 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 TRDNQ13061 729 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 CTR9Q6PD62 1173 aa24.06■■□□□ 1.44
TNFRSF1A-205ENST00000534885 USP17L12C9JPN9 530 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 USP17L21D6R901 530 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 SCNN1DP51172 638 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 ANTXR2P58335 489 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 AKNAD1Q5T1N1 836 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 LARGE2Q8N3Y3 721 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 BRF1Q92994 677 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 SPON1Q9HCB6 807 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 BCS1LQ9Y276 419 aa24.05■■□□□ 1.44
TNFRSF1A-205ENST00000534885 PSME4Q14997 1843 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 B4E1Z4 1266 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 FGD1P98174 961 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 EVX2Q03828 476 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 AGXT2Q9BYV1 514 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 MKRN1Q9UHC7 482 aaKnown RBP24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 LAMB1P07942 1786 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 PRC1O43663 620 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 MCM5P33992 734 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 STAG1Q8WVM7 1258 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 ZSCAN31Q96LW9 406 aaPredicted RBP24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 CHMP5Q9NZZ3 219 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 ANAPC4Q9UJX5 808 aa24.04■■□□□ 1.44
TNFRSF1A-205ENST00000534885 RHBDL3P58872 404 aa24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 FKBP1AP62942 108 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 ST3GAL1Q11201 340 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms