RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 RASGRF1Q13972 1273 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 RABEP1Q15276 862 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 MCMDC2Q4G0Z9 681 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 CST9Q5W186 159 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 SPATA5Q8NB90 893 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 FBXW7Q969H0 707 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 SNX21Q969T3 373 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 GLIS2Q9BZE0 524 aaPredicted RBP12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 ANTXR1Q9H6X2 564 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 GGA3Q9NZ52 723 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 HMG20BQ9P0W2 317 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 NDUFB9Q9Y6M9 179 aa12.08□□□□□ -0.48
LDLRAD3-206ENST00000534091 LAMA4Q16363 1823 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 SNAP23O00161 211 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 WNT10BO00744 389 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 CELF2O95319 508 aaKnown RBP12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 EGFRP00533 1210 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 CYP2E1P05181 493 aaPredicted RBP12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 BCAMP50895 628 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 HTRA3P83110 453 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 BECN1Q14457 450 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 APOBEC3FQ8IUX4 373 aaKnown RBP12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 KCNB2Q92953 911 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 SERPINA10Q9UK55 444 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 ABT1Q9ULW3 272 aaKnown RBP12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 PPP2R3BQ9Y5P8 575 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 MAST3O60307 1309 aa12.07□□□□□ -0.48
LDLRAD3-206ENST00000534091 MYO1BO43795 1136 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 ADD2P35612 726 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 GYG1P46976 350 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 UBE3CQ15386 1083 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 MFSD14BQ5SR56 506 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 ANGEL2Q5VTE6 544 aaKnown RBP12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 TMED8Q6PL24 325 aaPredicted RBP12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 SAPCD2Q86UD0 394 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 USP48Q86UV5 1035 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 C2orf69Q8N8R5 385 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 APPBP2Q92624 585 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 MAP4K1Q92918 833 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 DENND2AQ9ULE3 1009 aa12.06□□□□□ -0.48
LDLRAD3-206ENST00000534091 THSD7BQ9C0I4 1608 aa12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 TRAF5O00463 557 aa12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 FRAT2O75474 233 aaPredicted RBP12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 MAP2K2P36507 400 aa12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 PI16Q6UXB8 463 aa12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 CERS5Q8N5B7 392 aa12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 WDR66Q8TBY9 1149 aa12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
LDLRAD3-206ENST00000534091 CEP350Q5VT06 3117 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 UNCXA6NJT0 531 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 NF2P35240 595 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 VEGFBP49765 207 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 MAP2K1Q02750 393 aaPredicted RBP12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 PTH1RQ03431 593 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 TNFAIP1Q13829 316 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 NECTIN1Q15223 517 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 DSCC1Q9BVC3 393 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 GBA2Q9HCG7 927 aaPredicted RBP12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 MKRN1Q9UHC7 482 aaKnown RBP12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 PAPPA2Q9BXP8 1791 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 WDR33Q9C0J8 1336 aaKnown RBP12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 SALL1Q9NSC2 1324 aa12.04□□□□□ -0.48
LDLRAD3-206ENST00000534091 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 PDE6AP16499 860 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 MAP3K12Q12852 859 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 CCDC102AQ96A19 550 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 CDCA5Q96FF9 252 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 MXD3Q9BW11 206 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 RBM8AQ9Y5S9 174 aaKnown RBP12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 MYH2Q9UKX2 1941 aa12.03□□□□□ -0.48
LDLRAD3-206ENST00000534091 TCRBV5S4A2TA0A5A2 114 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 ADM5C9JUS6 153 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 IDH1O75874 414 aaKnown RBP12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 NOGQ13253 232 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 CFAP100Q494V2 611 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 RNF20Q5VTR2 975 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 HHIPL2Q6UWX4 724 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 HSCBQ8IWL3 235 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 OSBP2Q969R2 916 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 CAPNS2Q96L46 248 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 SEC62Q99442 399 aaKnown RBP12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 TM6SF1Q9BZW5 370 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 PALD1Q9ULE6 856 aa12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 TTF2Q9UNY4 1162 aaKnown RBP12.02□□□□□ -0.49
LDLRAD3-206ENST00000534091 M0R2C6 588 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms