RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.06■■□□□ 1.44
CHEK1-215ENST00000533778 ZNF408Q9H9D4 720 aa24.06■■□□□ 1.44
CHEK1-215ENST00000533778 AOX1Q06278 1338 aa24.06■■□□□ 1.44
CHEK1-215ENST00000533778 OTUD7AQ8TE49 926 aaPredicted RBP24.05■■□□□ 1.44
CHEK1-215ENST00000533778 ZNF384Q8TF68 577 aa24.05■■□□□ 1.44
CHEK1-215ENST00000533778 STAP2Q9UGK3 403 aa24.05■■□□□ 1.44
CHEK1-215ENST00000533778 SCAF8Q9UPN6 1271 aaKnown RBP24.05■■□□□ 1.44
CHEK1-215ENST00000533778 TCP10L2B9ZVM9 353 aa24.04■■□□□ 1.44
CHEK1-215ENST00000533778 CYP7A1P22680 504 aa24.04■■□□□ 1.44
CHEK1-215ENST00000533778 FMR1Q06787 632 aaKnown RBP eCLIP24.04■■□□□ 1.44
CHEK1-215ENST00000533778 RASA3Q14644 834 aa24.04■■□□□ 1.44
CHEK1-215ENST00000533778 CST9Q5W186 159 aa24.04■■□□□ 1.44
CHEK1-215ENST00000533778 FAM83AQ86UY5 434 aa24.04■■□□□ 1.44
CHEK1-215ENST00000533778 CERS3Q8IU89 383 aa24.04■■□□□ 1.44
CHEK1-215ENST00000533778 MAGEB6Q8N7X4 407 aa24.04■■□□□ 1.44
CHEK1-215ENST00000533778 SALL3Q9BXA9 1300 aa24.04■■□□□ 1.44
CHEK1-215ENST00000533778 PLCG2P16885 1265 aa24.03■■□□□ 1.44
CHEK1-215ENST00000533778 SUPT20HL1Q3ZLR7 823 aa24.03■■□□□ 1.44
CHEK1-215ENST00000533778 SLC9C2Q5TAH2 1124 aa24.03■■□□□ 1.44
CHEK1-215ENST00000533778 TSHZ3Q63HK5 1081 aa24.03■■□□□ 1.44
CHEK1-215ENST00000533778 ZSCAN25Q6NSZ9 544 aa24.03■■□□□ 1.44
CHEK1-215ENST00000533778 PDE1AP54750 535 aa24.02■■□□□ 1.44
CHEK1-215ENST00000533778 DLK2Q6UY11 383 aa24.02■■□□□ 1.44
CHEK1-215ENST00000533778 C2orf69Q8N8R5 385 aa24.02■■□□□ 1.44
CHEK1-215ENST00000533778 PI4K2BQ8TCG2 481 aa24.02■■□□□ 1.44
CHEK1-215ENST00000533778 AKAP11Q9UKA4 1901 aa24.02■■□□□ 1.44
CHEK1-215ENST00000533778 CACNB3P54284 484 aa24.01■■□□□ 1.43
CHEK1-215ENST00000533778 PPP4CP60510 307 aa24.01■■□□□ 1.43
CHEK1-215ENST00000533778 FKBP1BP68106 108 aa24.01■■□□□ 1.43
CHEK1-215ENST00000533778 LRRFIP1Q32MZ4 808 aaKnown RBP24.01■■□□□ 1.43
CHEK1-215ENST00000533778 ERICH6BQ5W0A0 696 aa24.01■■□□□ 1.43
CHEK1-215ENST00000533778 EDC3Q96F86 508 aaKnown RBP24.01■■□□□ 1.43
CHEK1-215ENST00000533778 IDI2Q9BXS1 227 aa24.01■■□□□ 1.43
CHEK1-215ENST00000533778 ABT1Q9ULW3 272 aaKnown RBP24.01■■□□□ 1.43
CHEK1-215ENST00000533778 PDE6AP16499 860 aa24■■□□□ 1.43
CHEK1-215ENST00000533778 PRAMEF18Q5VWM3 479 aa24■■□□□ 1.43
CHEK1-215ENST00000533778 HOOK2Q96ED9 719 aa24■■□□□ 1.43
CHEK1-215ENST00000533778 GBA2Q9HCG7 927 aaPredicted RBP24■■□□□ 1.43
CHEK1-215ENST00000533778 CENPQQ7L2Z9 268 aaPredicted RBP23.99■■□□□ 1.43
CHEK1-215ENST00000533778 KBTBD3Q8NAB2 608 aa23.99■■□□□ 1.43
CHEK1-215ENST00000533778 FAM151AQ8WW52 585 aa23.99■■□□□ 1.43
CHEK1-215ENST00000533778 AATFQ9NY61 560 aaKnown RBP eCLIP23.99■■□□□ 1.43
CHEK1-215ENST00000533778 ENTPD3O75355 529 aa23.98■■□□□ 1.43
CHEK1-215ENST00000533778 NPM3O75607 178 aaKnown RBP23.98■■□□□ 1.43
CHEK1-215ENST00000533778 RHBDL3P58872 404 aa23.98■■□□□ 1.43
CHEK1-215ENST00000533778 ADGRA1Q86SQ6 560 aa23.98■■□□□ 1.43
CHEK1-215ENST00000533778 CCDC136Q96JN2 1154 aa23.98■■□□□ 1.43
CHEK1-215ENST00000533778 OSBPL3Q9H4L5 887 aa23.98■■□□□ 1.43
CHEK1-215ENST00000533778 ADD2P35612 726 aa23.97■■□□□ 1.43
CHEK1-215ENST00000533778 UBE3CQ15386 1083 aa23.97■■□□□ 1.43
CHEK1-215ENST00000533778 PLEKHM2Q8IWE5 1019 aa23.97■■□□□ 1.43
CHEK1-215ENST00000533778 TEX11Q8IYF3 940 aa23.97■■□□□ 1.43
CHEK1-215ENST00000533778 TMEM39BQ9GZU3 492 aa23.97■■□□□ 1.43
CHEK1-215ENST00000533778 ZNF532Q9HCE3 1301 aa23.97■■□□□ 1.43
CHEK1-215ENST00000533778 TLL2Q9Y6L7 1015 aa23.97■■□□□ 1.43
CHEK1-215ENST00000533778 CNTNAP1P78357 1384 aa23.96■■□□□ 1.43
CHEK1-215ENST00000533778 PPP1R12BO60237 982 aaPredicted RBP23.96■■□□□ 1.43
CHEK1-215ENST00000533778 WDHD1O75717 1129 aaPredicted RBP23.96■■□□□ 1.43
CHEK1-215ENST00000533778 ZFYP08048 801 aaPredicted RBP23.96■■□□□ 1.43
CHEK1-215ENST00000533778 TCP10Q12799 353 aa23.96■■□□□ 1.43
CHEK1-215ENST00000533778 NFIAQ12857 509 aa23.96■■□□□ 1.43
CHEK1-215ENST00000533778 TTLL12Q14166 644 aaPredicted RBP23.96■■□□□ 1.43
CHEK1-215ENST00000533778 ARMC9Q7Z3E5 817 aa23.96■■□□□ 1.43
CHEK1-215ENST00000533778 FAM198AQ9UFP1 575 aa23.96■■□□□ 1.43
CHEK1-215ENST00000533778 MAGEB6P1A0A0J9YX57 407 aa23.95■■□□□ 1.42
CHEK1-215ENST00000533778 RGS3P49796 1198 aa23.95■■□□□ 1.42
CHEK1-215ENST00000533778 NBPF12Q5TAG4 269 aaPredicted RBP23.95■■□□□ 1.42
CHEK1-215ENST00000533778 SAPCD2Q86UD0 394 aa23.95■■□□□ 1.42
CHEK1-215ENST00000533778 MIGA1Q8NAN2 632 aa23.95■■□□□ 1.42
CHEK1-215ENST00000533778 SH3RF3Q8TEJ3 882 aaPredicted RBP23.95■■□□□ 1.42
CHEK1-215ENST00000533778 EVI5LQ96CN4 794 aa23.95■■□□□ 1.42
CHEK1-215ENST00000533778 HHIPL1Q96JK4 782 aa23.95■■□□□ 1.42
CHEK1-215ENST00000533778 TEPSINQ96N21 525 aa23.95■■□□□ 1.42
CHEK1-215ENST00000533778 RPAP1Q9BWH6 1393 aaPredicted RBP23.94■■□□□ 1.42
CHEK1-215ENST00000533778 TCRBV5S4A2TA0A5A2 114 aa23.94■■□□□ 1.42
CHEK1-215ENST00000533778 HTRA3P83110 453 aa23.94■■□□□ 1.42
CHEK1-215ENST00000533778 PICALMQ13492 652 aa23.94■■□□□ 1.42
CHEK1-215ENST00000533778 DEFB115Q30KQ5 88 aa23.94■■□□□ 1.42
CHEK1-215ENST00000533778 ECM29Q5VYK3 1845 aa23.94■■□□□ 1.42
CHEK1-215ENST00000533778 MYH2Q9UKX2 1941 aa23.93■■□□□ 1.42
CHEK1-215ENST00000533778 HUNKP57058 714 aa23.93■■□□□ 1.42
CHEK1-215ENST00000533778 TICAM2Q86XR7 235 aa23.93■■□□□ 1.42
CHEK1-215ENST00000533778 FSD1Q9BTV5 496 aa23.93■■□□□ 1.42
CHEK1-215ENST00000533778 MAST2Q6P0Q8 1798 aa23.93■■□□□ 1.42
CHEK1-215ENST00000533778 RFX7Q2KHR2 1363 aa23.92■■□□□ 1.42
CHEK1-215ENST00000533778 RASSF10A6NK89 507 aa23.92■■□□□ 1.42
CHEK1-215ENST00000533778 RNF113AO15541 343 aaKnown RBP23.92■■□□□ 1.42
CHEK1-215ENST00000533778 DCAF15Q66K64 600 aa23.92■■□□□ 1.42
CHEK1-215ENST00000533778 ZSCAN29Q8IWY8 852 aaPredicted RBP23.92■■□□□ 1.42
CHEK1-215ENST00000533778 POLR2AP24928 1970 aaKnown RBP23.91■■□□□ 1.42
CHEK1-215ENST00000533778 DYNLL1P63167 89 aaKnown RBP23.91■■□□□ 1.42
CHEK1-215ENST00000533778 TGFBRAP1Q8WUH2 860 aa23.91■■□□□ 1.42
CHEK1-215ENST00000533778 RIOK1Q9BRS2 568 aaKnown RBP23.91■■□□□ 1.42
CHEK1-215ENST00000533778 DDX4Q9NQI0 724 aaKnown RBP23.91■■□□□ 1.42
CHEK1-215ENST00000533778 ANGEL1Q9UNK9 670 aaKnown RBP23.91■■□□□ 1.42
CHEK1-215ENST00000533778 UNCXA6NJT0 531 aa23.9■■□□□ 1.42
CHEK1-215ENST00000533778 TRIM6-TRIM34B2RNG4 842 aa23.9■■□□□ 1.42
CHEK1-215ENST00000533778 ECE1P42892 770 aa23.9■■□□□ 1.42
CHEK1-215ENST00000533778 USP5P45974 858 aa23.9■■□□□ 1.42
CHEK1-215ENST00000533778 IREB2P48200 963 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms