RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PAXBP1Q9Y5B6 917 aa14.18□□□□□ -0.14
RAD50-209ENST00000533482 ZNF202O95125 648 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 PDE6AP16499 860 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 MSL1Q68DK7 614 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 STAMQ92783 540 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 TRIM47Q96LD4 638 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 SCRN1Q12765 414 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 HLFQ16534 295 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 TMEM266Q2M3C6 531 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 KANK3Q6NY19 840 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 ANKRD2Q9GZV1 360 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 QRICH2Q9H0J4 1663 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 VWA3AA6NCI4 1184 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 KARSQ15046 597 aaKnown RBP14.17□□□□□ -0.14
RAD50-209ENST00000533482 KRI1Q8N9T8 703 aaKnown RBP14.17□□□□□ -0.14
RAD50-209ENST00000533482 PKNOX2Q96KN3 472 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 DSCC1Q9BVC3 393 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 MAPK8IP1Q9UQF2 711 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 ARHGEF40Q8TER5 1519 aa14.17□□□□□ -0.14
RAD50-209ENST00000533482 ZNF75DP51815 510 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 MAPKAPK5Q8IW41 473 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 PTPRMP28827 1452 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 ADGRL3Q9HAR2 1447 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 USP17L12C9JPN9 530 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 USP17L21D6R901 530 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 TDRD12Q587J7 1177 aaKnown RBP14.16□□□□□ -0.14
RAD50-209ENST00000533482 CCDC178Q5BJE1 867 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
RAD50-209ENST00000533482 PDE8BO95263 885 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 STAT6P42226 847 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 TNNI2P48788 182 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 FKBP15Q5T1M5 1219 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 RAB34Q9BZG1 259 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 CPSF1Q10570 1443 aaKnown RBP14.16□□□□□ -0.14
RAD50-209ENST00000533482 DIP2CQ9Y2E4 1556 aa14.16□□□□□ -0.14
RAD50-209ENST00000533482 POLR2DO15514 142 aaKnown RBP14.15□□□□□ -0.14
RAD50-209ENST00000533482 YEATS4O95619 227 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 IBSPP21815 317 aaPredicted RBP14.15□□□□□ -0.14
RAD50-209ENST00000533482 SPA17Q15506 151 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 SMIM5Q71RC9 77 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 TRERF1Q96PN7 1200 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 GPHNQ9NQX3 736 aaPredicted RBP14.15□□□□□ -0.14
RAD50-209ENST00000533482 CGNQ9P2M7 1197 aaKnown RBP14.15□□□□□ -0.14
RAD50-209ENST00000533482 KCNH3Q9ULD8 1083 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 PARP3Q9Y6F1 533 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 ODF2Q5BJF6 829 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 ZDHHC9Q9Y397 364 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 TCERG1LQ5VWI1 586 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 OGFOD1Q8N543 542 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 ZNF397Q8NF99 534 aaPredicted RBP14.15□□□□□ -0.14
RAD50-209ENST00000533482 RIOK3O14730 519 aaKnown RBP14.15□□□□□ -0.14
RAD50-209ENST00000533482 CHRNDQ07001 517 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 CALML4Q96GE6 196 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 LZTFL1Q9NQ48 299 aa14.15□□□□□ -0.14
RAD50-209ENST00000533482 ANKARQ7Z5J8 1434 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 CCDC66A2RUB6 948 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 MYL5Q02045 173 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 MYSM1Q5VVJ2 828 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 JAKMIP3Q5VZ66 844 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 TMEM87BQ96K49 555 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 HEG1Q9ULI3 1381 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 TCP10Q12799 353 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 NECTIN1Q15223 517 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 SYCP1Q15431 976 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 PDIA3P30101 505 aaKnown RBP14.14□□□□□ -0.15
RAD50-209ENST00000533482 NLRP10Q86W26 655 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 CPS1P31327 1500 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
RAD50-209ENST00000533482 KIDINS220Q9ULH0 1771 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 TGFBRAP1Q8WUH2 860 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 GPCPD1Q9NPB8 672 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 LUC7LQ9NQ29 371 aaKnown RBP14.13□□□□□ -0.15
RAD50-209ENST00000533482 SAMM50Q9Y512 469 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 TRIM21P19474 475 aaKnown RBP14.13□□□□□ -0.15
RAD50-209ENST00000533482 LEKR1Q6ZMV7 388 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 CUL5Q93034 780 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 PFKFB2O60825 505 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 KRT2P35908 639 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 MATR3P43243 847 aaKnown RBP eCLIP14.13□□□□□ -0.156e-6■■■■□ 21.9
RAD50-209ENST00000533482 CCDC148Q8NFR7 591 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 GGA1Q9UJY5 639 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 ELP1O95163 1332 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 ECM2O94769 699 aaPredicted RBP14.13□□□□□ -0.15
RAD50-209ENST00000533482 TTLL12Q14166 644 aaPredicted RBP14.13□□□□□ -0.15
RAD50-209ENST00000533482 ATL3Q6DD88 541 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 TRMT44Q8IYL2 757 aaKnown RBP14.13□□□□□ -0.15
RAD50-209ENST00000533482 VPS54Q9P1Q0 977 aa14.13□□□□□ -0.15
RAD50-209ENST00000533482 CCT6AP40227 531 aaKnown RBP14.12□□□□□ -0.15
RAD50-209ENST00000533482 LETM2Q2VYF4 491 aa14.12□□□□□ -0.15
RAD50-209ENST00000533482 PIK3AP1Q6ZUJ8 805 aa14.12□□□□□ -0.15
RAD50-209ENST00000533482 OSBP2Q969R2 916 aa14.12□□□□□ -0.15
RAD50-209ENST00000533482 ZMYND15Q9H091 742 aa14.12□□□□□ -0.15
RAD50-209ENST00000533482 SRP68Q9UHB9 627 aaKnown RBP14.12□□□□□ -0.15
RAD50-209ENST00000533482 NRBP1Q9UHY1 535 aa14.12□□□□□ -0.15
RAD50-209ENST00000533482 INO80Q9ULG1 1556 aaPredicted RBP14.12□□□□□ -0.15
RAD50-209ENST00000533482 MAST3O60307 1309 aa14.12□□□□□ -0.15
RAD50-209ENST00000533482 CHGBP05060 677 aa14.12□□□□□ -0.15
RAD50-209ENST00000533482 ERBB4Q15303 1308 aa14.12□□□□□ -0.15
RAD50-209ENST00000533482 IFNL3Q8IZI9 196 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms