RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 KRT40Q6A162 431 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 KANK3Q6NY19 840 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 TAX1BP1Q86VP1 789 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 TM6SF1Q9BZW5 370 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 PDE8AO60658 829 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 ZNF202O95125 648 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 CCT6AP40227 531 aaKnown RBP13.9□□□□□ -0.18
BDNF-218ENST00000533246 PUM3Q15397 648 aaKnown RBP13.9□□□□□ -0.18
BDNF-218ENST00000533246 ICE2Q659A1 982 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 TXLNBQ8N3L3 684 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.18
BDNF-218ENST00000533246 CCDC150Q8NCX0 1101 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 FAM212AQ96EL1 285 aa13.9□□□□□ -0.18
BDNF-218ENST00000533246 AATFQ9NY61 560 aaKnown RBP eCLIP13.9□□□□□ -0.18
BDNF-218ENST00000533246 SASH1O94885 1247 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 BRAPQ7Z569 592 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 OSBPL3Q9H4L5 887 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 SNAP23O00161 211 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
BDNF-218ENST00000533246 TAF4BQ92750 862 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 GTF3C6Q969F1 213 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 RTCBQ9Y3I0 505 aaKnown RBP13.89□□□□□ -0.19
BDNF-218ENST00000533246 TNNI2P48788 182 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 SF3B2Q13435 895 aaKnown RBP13.89□□□□□ -0.19
BDNF-218ENST00000533246 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
BDNF-218ENST00000533246 NCAPGQ9BPX3 1015 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 CLSTN2Q9H4D0 955 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 GEMIN8Q9NWZ8 242 aaKnown RBP13.89□□□□□ -0.19
BDNF-218ENST00000533246 KCNH3Q9ULD8 1083 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 PAXBP1Q9Y5B6 917 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
BDNF-218ENST00000533246 ZNF500O60304 480 aaPredicted RBP13.88□□□□□ -0.19
BDNF-218ENST00000533246 BCAMP50895 628 aa13.88□□□□□ -0.19
BDNF-218ENST00000533246 CDR1P51861 262 aa13.88□□□□□ -0.19
BDNF-218ENST00000533246 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
BDNF-218ENST00000533246 SDR42E1Q8WUS8 393 aa13.88□□□□□ -0.19
BDNF-218ENST00000533246 MAP4K1Q92918 833 aa13.88□□□□□ -0.19
BDNF-218ENST00000533246 USP6P35125 1406 aa13.88□□□□□ -0.19
BDNF-218ENST00000533246 NOP2P46087 812 aaKnown RBP13.88□□□□□ -0.19
BDNF-218ENST00000533246 GYG1P46976 350 aa13.88□□□□□ -0.19
BDNF-218ENST00000533246 EPHA10Q5JZY3 1008 aa13.88□□□□□ -0.19
BDNF-218ENST00000533246 ZC3H12CQ9C0D7 883 aaKnown RBP13.88□□□□□ -0.19
BDNF-218ENST00000533246 GREM2Q9H772 168 aa13.88□□□□□ -0.19
BDNF-218ENST00000533246 GPHNQ9NQX3 736 aaPredicted RBP13.88□□□□□ -0.19
BDNF-218ENST00000533246 TSG101Q99816 390 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 NEO1Q92859 1461 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
BDNF-218ENST00000533246 LETM2Q2VYF4 491 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 FAM47AQ5JRC9 791 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 PIK3AP1Q6ZUJ8 805 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 EEF2KMTQ96G04 330 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 VPS54Q9P1Q0 977 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
BDNF-218ENST00000533246 MYOM2P54296 1465 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 MYL5Q02045 173 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 BMS1Q14692 1282 aaKnown RBP13.87□□□□□ -0.19
BDNF-218ENST00000533246 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
BDNF-218ENST00000533246 VPS16Q9H269 839 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 PHKA1P46020 1223 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 WDR78Q5VTH9 848 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 SPATA5Q8NB90 893 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 LPIN2Q92539 896 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 SAMM50Q9Y512 469 aa13.87□□□□□ -0.19
BDNF-218ENST00000533246 GOLGA6L10A6NI86 522 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 TMCO5BA8MYB1 307 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 RIOK3O14730 519 aaKnown RBP13.86□□□□□ -0.19
BDNF-218ENST00000533246 PTPN21Q16825 1174 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 SLF2Q8IX21 1173 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 KIF24Q5T7B8 1368 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 GNAT2P19087 354 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 KRT2P35908 639 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 PRPF4BQ13523 1007 aaKnown RBP13.86□□□□□ -0.19
BDNF-218ENST00000533246 ZNF827Q17R98 1081 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 SYNMO15061 1565 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 MACROD2A1Z1Q3 448 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 NEBLO76041 1014 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 ZNF75DP51815 510 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 SCRN1Q12765 414 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 CALR3Q96L12 384 aaKnown RBP13.86□□□□□ -0.19
BDNF-218ENST00000533246 HAUS7Q99871 368 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 GUCA1BQ9UMX6 200 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 KDRP35968 1356 aa13.86□□□□□ -0.19
BDNF-218ENST00000533246 USO1O60763 962 aaKnown RBP13.85□□□□□ -0.19
BDNF-218ENST00000533246 PHACTR2O75167 634 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 HIBADHP31937 336 aaKnown RBP13.85□□□□□ -0.19
BDNF-218ENST00000533246 PAFAH1B1P43034 410 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 AMPD3Q01432 767 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 LLPHQ9BRT6 129 aaKnown RBP13.85□□□□□ -0.19
BDNF-218ENST00000533246 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 CDC42BPAQ5VT25 1732 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 PLXNC1O60486 1568 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 USP17L12C9JPN9 530 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 USP17L21D6R901 530 aa13.85□□□□□ -0.19
BDNF-218ENST00000533246 PSMA7O14818 248 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms