RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 UBE3CQ15386 1083 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 TTC22Q5TAA0 569 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 CDC37L1Q7L3B6 337 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 TICAM2Q86XR7 235 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 SULF1Q8IWU6 871 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 VEZTQ9HBM0 779 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 GGA3Q9NZ52 723 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 ASTN2O75129 1339 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 PITPNM2Q9BZ72 1349 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 RNF113AO15541 343 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-211ENST00000533012 PLCG2P16885 1265 aa13.57□□□□□ -0.24
TRAPPC4-211ENST00000533012 CDC42EP5Q6NZY7 148 aa13.57□□□□□ -0.24
TRAPPC4-211ENST00000533012 KRT26Q7Z3Y9 468 aa13.57□□□□□ -0.24
TRAPPC4-211ENST00000533012 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
TRAPPC4-211ENST00000533012 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-211ENST00000533012 AATFQ9NY61 560 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRAPPC4-211ENST00000533012 AKAP11Q9UKA4 1901 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 ZNF646O15015 1829 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 MAGEB6P1A0A0J9YX57 407 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 TCRBV5S4A2TA0A5A2 114 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 TNNI2P48788 182 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 FSTL1Q12841 308 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 TNFAIP1Q13829 316 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 ADGRA1Q86SQ6 560 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 MIGA1Q8NAN2 632 aa13.56□□□□□ -0.24
TRAPPC4-211ENST00000533012 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
TRAPPC4-211ENST00000533012 SDSP20132 328 aa13.55□□□□□ -0.24
TRAPPC4-211ENST00000533012 FKBP1CQ5VVH2 108 aa13.55□□□□□ -0.24
TRAPPC4-211ENST00000533012 GLIS2Q9BZE0 524 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC4-211ENST00000533012 MYH13Q9UKX3 1938 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 HIP1O00291 1037 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 CHGBP05060 677 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 CACNB3P54284 484 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 RHBDL3P58872 404 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 DYNLL1P63167 89 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 RASA3Q14644 834 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 SLFNL1Q499Z3 407 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 FAM83AQ86UY5 434 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 TEX11Q8IYF3 940 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 SH3RF3Q8TEJ3 882 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 APPBP2Q92624 585 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 IDI2Q9BXS1 227 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 DEFB129Q9H1M3 183 aa13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-211ENST00000533012 ADM5C9JUS6 153 aa13.53□□□□□ -0.24
TRAPPC4-211ENST00000533012 ITGBL1O95965 494 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-211ENST00000533012 RIOK1Q9BRS2 568 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-211ENST00000533012 PUS7LQ9H0K6 701 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-211ENST00000533012 PPP2R3BQ9Y5P8 575 aa13.53□□□□□ -0.24
TRAPPC4-211ENST00000533012 ENTPD3O75355 529 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 WDHD1O75717 1129 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 MBD4O95243 580 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 USP5P45974 858 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 TCP10Q12799 353 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 NFIAQ12857 509 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 PICALMQ13492 652 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 SUPT20HL1Q3ZLR7 823 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 ZMYM1Q5SVZ6 1142 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 TGFBRAP1Q8WUH2 860 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 FAM151AQ8WW52 585 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 OSBP2Q969R2 916 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 CRNKL1Q9BZJ0 848 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 HELLSQ9NRZ9 838 aa13.52□□□□□ -0.25
TRAPPC4-211ENST00000533012 TRAF5O00463 557 aa13.51□□□□□ -0.25
TRAPPC4-211ENST00000533012 MCMDC2Q4G0Z9 681 aa13.51□□□□□ -0.25
TRAPPC4-211ENST00000533012 PRAMEF18Q5VWM3 479 aa13.51□□□□□ -0.25
TRAPPC4-211ENST00000533012 LCORLQ8N3X6 602 aa13.51□□□□□ -0.25
TRAPPC4-211ENST00000533012 DIAPH3Q9NSV4 1193 aa13.51□□□□□ -0.25
TRAPPC4-211ENST00000533012 FAM198AQ9UFP1 575 aa13.51□□□□□ -0.25
TRAPPC4-211ENST00000533012 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 NF2P35240 595 aa13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 CWC27Q6UX04 472 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 DLK2Q6UY11 383 aa13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 ZSCAN29Q8IWY8 852 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 DDRGK1Q96HY6 314 aa13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 STRBPQ96SI9 672 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 SEC62Q99442 399 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 TMEM39BQ9GZU3 492 aa13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 SLC4A4Q9Y6R1 1079 aa13.5□□□□□ -0.25
TRAPPC4-211ENST00000533012 CNTNAP1P78357 1384 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 M0R2C6 588 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 GPAA1O43292 621 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 GNAT2P19087 354 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 MAPKAPK5Q8IW41 473 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 ZFPM1Q8IX07 1006 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 HOOK2Q96ED9 719 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 FAM227BQ96M60 508 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms