RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 FCHSD1Q86WN1 690 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 TRIM37O94972 964 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 DACT1Q9NYF0 836 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 KIAA0232Q92628 1395 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 BACH1O14867 736 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 BICDL2A1A5D9 508 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 UBASH3AP57075 661 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 RGS22Q8NE09 1264 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 NCOA5Q9HCD5 579 aaKnown RBP16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 RTL1A6NKG5 1358 aa16.72■□□□□ 0.27
PCDHA9-202ENST00000532602 CTSWP56202 376 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 LETM2Q2VYF4 491 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 BIN2Q9UBW5 565 aaPredicted RBP16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 SPTLC2O15270 562 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 LPIN2Q92539 896 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 DOK7Q18PE1 504 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 STX17P56962 302 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 SNW1Q13573 536 aaKnown RBP16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 AOPEPQ8N6M6 819 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 GLT8D2Q9H1C3 349 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 ARHGEF10LQ9HCE6 1279 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 MRVI1Q9Y6F6 885 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 ZNF532Q9HCE3 1301 aa16.71■□□□□ 0.27
PCDHA9-202ENST00000532602 NLRP1Q9C000 1473 aa16.71■□□□□ 0.26
PCDHA9-202ENST00000532602 BAG6P46379 1132 aa16.71■□□□□ 0.26
PCDHA9-202ENST00000532602 FMNL3Q8IVF7 1028 aa16.71■□□□□ 0.26
PCDHA9-202ENST00000532602 DNAJC25Q9H1X3 360 aa16.71■□□□□ 0.26
PCDHA9-202ENST00000532602 CCDC175P0C221 793 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 FERP16591 822 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 ARID5AQ03989 594 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 CKAP4Q07065 602 aaKnown RBP16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 BRAPQ7Z569 592 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 SREK1Q8WXA9 508 aaKnown RBP16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 PPIP5K2O43314 1243 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 ZNF354CQ86Y25 554 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 MLH3Q9UHC1 1453 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 USH1GQ495M9 461 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 LRSAM1Q6UWE0 723 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 BCCIPQ9P287 314 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 ASAP1Q9ULH1 1129 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 RPS6KB1P23443 525 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 GTF2IP78347 998 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 LMBR1Q8WVP7 490 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 CEP83Q9Y592 693 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 WDR66Q8TBY9 1149 aa16.7■□□□□ 0.26
PCDHA9-202ENST00000532602 DTHD1Q6ZMT9 781 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 SELENOOQ9BVL4 669 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 FAM47AQ5JRC9 791 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 hCG_1642624A0A1W2PR95 340 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 VWA3AA6NCI4 1184 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 TCIRG1Q13488 830 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 MROH5Q6ZUA9 1318 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 DDX39AO00148 427 aaKnown RBP16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 PTGS1P23219 599 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 GNG11P61952 73 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 HECW2Q9P2P5 1572 aa16.69■□□□□ 0.26
PCDHA9-202ENST00000532602 TAF12Q16514 161 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 MICALCLQ6ZW33 695 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 CCNT1O60563 726 aaKnown RBP16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 NIM1KQ8IY84 436 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 PRAMEF22A3QJZ6 481 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 RPL13P26373 211 aaKnown RBP16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 GYG1P46976 350 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 ROBO2Q9HCK4 1378 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 CGNQ9P2M7 1197 aaKnown RBP16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 IVNS1ABPQ9Y6Y0 642 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 PIK3AP1Q6ZUJ8 805 aa16.68■□□□□ 0.26
PCDHA9-202ENST00000532602 ZNF335Q9H4Z2 1342 aaPredicted RBP16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 MYCLP12524 364 aaPredicted RBP16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 IQUBQ8NA54 791 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 APPBP2Q92624 585 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 DKC1O60832 514 aaKnown RBP eCLIP16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 SCNN1DP51172 638 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 TERF1P54274 439 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 RASAL2Q9UJF2 1139 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 ZSWIM4Q9H7M6 989 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 SNX14Q9Y5W7 946 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 PPP1R2P41236 205 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 PPP1R14CQ8TAE6 165 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 MBD5Q9P267 1494 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 TMEM110-MUSTN1A8MSY1 372 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 CCDC155Q8N6L0 562 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
PCDHA9-202ENST00000532602 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
PCDHA9-202ENST00000532602 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms