RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 FAM109BQ6ICB4 259 aaPredicted RBP24.86■■□□□ 1.57
PTP4A2-214ENST00000532289 ANKLE1Q8NAG6 615 aa24.86■■□□□ 1.57
PTP4A2-214ENST00000532289 PARK7Q99497 189 aaKnown RBP24.86■■□□□ 1.57
PTP4A2-214ENST00000532289 ZNF853P0CG23 659 aa24.85■■□□□ 1.57
PTP4A2-214ENST00000532289 HOOK2Q96ED9 719 aa24.85■■□□□ 1.57
PTP4A2-214ENST00000532289 CACNB3P54284 484 aa24.84■■□□□ 1.57
PTP4A2-214ENST00000532289 MUC3AQ02505 3323 aa24.83■■□□□ 1.57
PTP4A2-214ENST00000532289 ANKRD18BA2A2Z9 1011 aa24.83■■□□□ 1.57
PTP4A2-214ENST00000532289 CYP2C8P10632 490 aa24.83■■□□□ 1.57
PTP4A2-214ENST00000532289 CASP7P55210 303 aa24.83■■□□□ 1.57
PTP4A2-214ENST00000532289 TDRD7Q8NHU6 1098 aaKnown RBP24.83■■□□□ 1.57
PTP4A2-214ENST00000532289 DDX60LQ5H9U9 1706 aaKnown RBP24.83■■□□□ 1.57
PTP4A2-214ENST00000532289 DOCK3Q8IZD9 2030 aa24.83■■□□□ 1.56
PTP4A2-214ENST00000532289 INPP5BP32019 993 aa24.82■■□□□ 1.56
PTP4A2-214ENST00000532289 DCAF15Q66K64 600 aa24.82■■□□□ 1.56
PTP4A2-214ENST00000532289 GPAT2Q6NUI2 795 aa24.82■■□□□ 1.56
PTP4A2-214ENST00000532289 FAM83AQ86UY5 434 aa24.82■■□□□ 1.56
PTP4A2-214ENST00000532289 ZNF341Q9BYN7 854 aa24.82■■□□□ 1.56
PTP4A2-214ENST00000532289 TTC28Q96AY4 2481 aa24.81■■□□□ 1.56
PTP4A2-214ENST00000532289 NBPF3Q9H094 633 aa24.81■■□□□ 1.56
PTP4A2-214ENST00000532289 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.81■■□□□ 1.564e-8■■■■■ 32.9
PTP4A2-214ENST00000532289 CCDC30Q5VVM6 783 aa24.8■■□□□ 1.56
PTP4A2-214ENST00000532289 COL2A1P02458 1487 aaPredicted RBP24.8■■□□□ 1.56
PTP4A2-214ENST00000532289 COL9A1P20849 921 aa24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 HDLBPQ00341 1268 aaKnown RBP24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 GCKRQ14397 625 aa24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 GRIK5Q16478 980 aa24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 FKBP1CQ5VVH2 108 aa24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 MIGA2Q7L4E1 593 aa24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 C8orf58Q8NAV2 365 aa24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 RUNDC1Q96C34 613 aa24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 RPAP1Q9BWH6 1393 aaPredicted RBP24.79■■□□□ 1.56
PTP4A2-214ENST00000532289 TNPO2O14787 897 aaKnown RBP24.78■■□□□ 1.56
PTP4A2-214ENST00000532289 ZNF112Q9UJU3 913 aa24.78■■□□□ 1.56
PTP4A2-214ENST00000532289 FAM161BQ96MY7 647 aa24.77■■□□□ 1.56
PTP4A2-214ENST00000532289 C11orf49Q9H6J7 331 aa24.77■■□□□ 1.56
PTP4A2-214ENST00000532289 IFIT5Q13325 482 aaKnown RBP24.76■■□□□ 1.55
PTP4A2-214ENST00000532289 CHMP4AQ9BY43 222 aa24.76■■□□□ 1.55
PTP4A2-214ENST00000532289 IFT57Q9NWB7 429 aa24.76■■□□□ 1.55
PTP4A2-214ENST00000532289 TMOD2Q9NZR1 351 aa24.76■■□□□ 1.55
PTP4A2-214ENST00000532289 CXCL11O14625 94 aa24.75■■□□□ 1.55
PTP4A2-214ENST00000532289 HIBADHP31937 336 aaKnown RBP24.75■■□□□ 1.55
PTP4A2-214ENST00000532289 GYG1P46976 350 aa24.75■■□□□ 1.55
PTP4A2-214ENST00000532289 PLIN1O60240 522 aa24.74■■□□□ 1.55
PTP4A2-214ENST00000532289 NOL9Q5SY16 702 aaKnown RBP24.74■■□□□ 1.55
PTP4A2-214ENST00000532289 TEKT1Q969V4 418 aa24.74■■□□□ 1.55
PTP4A2-214ENST00000532289 FAM84BQ96KN1 310 aaPredicted RBP24.74■■□□□ 1.55
PTP4A2-214ENST00000532289 ZDHHC15Q96MV8 337 aa24.74■■□□□ 1.55
PTP4A2-214ENST00000532289 TAOK2Q9UL54 1235 aa24.74■■□□□ 1.55
PTP4A2-214ENST00000532289 GNAI1P63096 354 aa24.72■■□□□ 1.55
PTP4A2-214ENST00000532289 FOXO4P98177 505 aa24.72■■□□□ 1.55
PTP4A2-214ENST00000532289 APOBEC3HQ6NTF7 200 aaKnown RBP24.72■■□□□ 1.55
PTP4A2-214ENST00000532289 MRIQ9BWK5 157 aa24.72■■□□□ 1.55
PTP4A2-214ENST00000532289 CDH23Q9H251 3354 aa24.71■■□□□ 1.55
PTP4A2-214ENST00000532289 MAFAQ8NHW3 353 aaPredicted RBP24.71■■□□□ 1.55
PTP4A2-214ENST00000532289 SYMPKQ92797 1274 aaKnown RBP24.71■■□□□ 1.55
PTP4A2-214ENST00000532289 COA7Q96BR5 231 aa24.71■■□□□ 1.55
PTP4A2-214ENST00000532289 SLC45A1Q9Y2W3 748 aa24.71■■□□□ 1.55
PTP4A2-214ENST00000532289 AK9Q5TCS8 1911 aa24.71■■□□□ 1.55
PTP4A2-214ENST00000532289 PFASO15067 1338 aa24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 UBE4AQ14139 1066 aa24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 ZNF697Q5TEC3 545 aa24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 FASTKD5Q7L8L6 764 aaKnown RBP24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 CDX2Q99626 313 aaPredicted RBP24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 MYH16Q9H6N6 1097 aa24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 HMX1Q9NP08 348 aaPredicted RBP24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 OGDHLQ9ULD0 1010 aa24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 PTPRFP10586 1907 aa24.7■■□□□ 1.54
PTP4A2-214ENST00000532289 A0A0G2JLL6 359 aaPredicted RBP24.69■■□□□ 1.54
PTP4A2-214ENST00000532289 HMGCRP04035 888 aa24.69■■□□□ 1.54
PTP4A2-214ENST00000532289 MDM2Q00987 491 aaPredicted RBP24.69■■□□□ 1.54
PTP4A2-214ENST00000532289 LDHAL6AQ6ZMR3 332 aa24.69■■□□□ 1.54
PTP4A2-214ENST00000532289 PRRT2Q7Z6L0 340 aaPredicted RBP24.69■■□□□ 1.54
PTP4A2-214ENST00000532289 ZNF594Q96JF6 807 aaPredicted RBP24.69■■□□□ 1.54
PTP4A2-214ENST00000532289 G2E3Q7L622 706 aa24.68■■□□□ 1.54
PTP4A2-214ENST00000532289 TSPYL6Q8N831 410 aa24.68■■□□□ 1.54
PTP4A2-214ENST00000532289 TBC1D22AQ8WUA7 517 aa24.68■■□□□ 1.54
PTP4A2-214ENST00000532289 FAM151AQ8WW52 585 aa24.68■■□□□ 1.54
PTP4A2-214ENST00000532289 CHMP3Q9Y3E7 222 aa24.68■■□□□ 1.54
PTP4A2-214ENST00000532289 DNAH12Q6ZR08 3092 aa24.67■■□□□ 1.54
PTP4A2-214ENST00000532289 CNNM1Q9NRU3 951 aa24.67■■□□□ 1.54
PTP4A2-214ENST00000532289 TRIM32Q13049 653 aa24.66■■□□□ 1.54
PTP4A2-214ENST00000532289 SMCR8Q8TEV9 937 aaPredicted RBP24.66■■□□□ 1.54
PTP4A2-214ENST00000532289 RAPGEFL1Q9UHV5 662 aa24.66■■□□□ 1.54
PTP4A2-214ENST00000532289 COL6A1P12109 1028 aa24.65■■□□□ 1.54
PTP4A2-214ENST00000532289 LINS1Q8NG48 757 aa24.65■■□□□ 1.54
PTP4A2-214ENST00000532289 STK31Q9BXU1 1019 aa24.65■■□□□ 1.54
PTP4A2-214ENST00000532289 IQSEC3Q9UPP2 1182 aaPredicted RBP24.65■■□□□ 1.54
PTP4A2-214ENST00000532289 CHAF1AQ13111 956 aaPredicted RBP24.64■■□□□ 1.54
PTP4A2-214ENST00000532289 HHIPL2Q6UWX4 724 aa24.64■■□□□ 1.54
PTP4A2-214ENST00000532289 GADL1Q6ZQY3 521 aa24.64■■□□□ 1.54
PTP4A2-214ENST00000532289 FBXO33Q7Z6M2 555 aa24.64■■□□□ 1.54
PTP4A2-214ENST00000532289 ANKRD13CQ8N6S4 541 aa24.64■■□□□ 1.54
PTP4A2-214ENST00000532289 ZHX2Q9Y6X8 837 aa24.64■■□□□ 1.54
PTP4A2-214ENST00000532289 CALD1Q05682 793 aaKnown RBP24.63■■□□□ 1.53
PTP4A2-214ENST00000532289 CCDC57Q2TAC2 916 aa24.63■■□□□ 1.53
PTP4A2-214ENST00000532289 LMBR1LQ6UX01 489 aa24.63■■□□□ 1.53
PTP4A2-214ENST00000532289 SEMA6BQ9H3T3 888 aa24.63■■□□□ 1.53
PTP4A2-214ENST00000532289 AFG3L2Q9Y4W6 797 aa24.63■■□□□ 1.53
PTP4A2-214ENST00000532289 PHIPQ8WWQ0 1821 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms