RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 TCP10L2B9ZVM9 353 aa25.27■■□□□ 1.64
CCS-207ENST00000531990 MX1P20591 662 aa25.27■■□□□ 1.64
CCS-207ENST00000531990 USP40Q9NVE5 1235 aa25.27■■□□□ 1.64
CCS-207ENST00000531990 BTDP43251 543 aa25.26■■□□□ 1.63
CCS-207ENST00000531990 FKBP1CQ5VVH2 108 aa25.26■■□□□ 1.63
CCS-207ENST00000531990 CST9Q5W186 159 aa25.26■■□□□ 1.63
CCS-207ENST00000531990 CDC42EP5Q6NZY7 148 aa25.26■■□□□ 1.63
CCS-207ENST00000531990 TMED8Q6PL24 325 aaPredicted RBP25.26■■□□□ 1.63
CCS-207ENST00000531990 ZNF384Q8TF68 577 aa25.26■■□□□ 1.63
CCS-207ENST00000531990 LNPKQ9C0E8 428 aa25.26■■□□□ 1.63
CCS-207ENST00000531990 GPR75-ASB3A0A0A6YYF3 556 aa25.25■■□□□ 1.63
CCS-207ENST00000531990 CACNB3P54284 484 aa25.25■■□□□ 1.63
CCS-207ENST00000531990 RASA3Q14644 834 aa25.25■■□□□ 1.63
CCS-207ENST00000531990 PRAMEF18Q5VWM3 479 aa25.25■■□□□ 1.63
CCS-207ENST00000531990 CHD1LQ86WJ1 897 aa25.25■■□□□ 1.63
CCS-207ENST00000531990 C2orf69Q8N8R5 385 aa25.25■■□□□ 1.63
CCS-207ENST00000531990 OTUD7AQ8TE49 926 aaPredicted RBP25.25■■□□□ 1.63
CCS-207ENST00000531990 ABT1Q9ULW3 272 aaKnown RBP25.25■■□□□ 1.63
CCS-207ENST00000531990 BAG3O95817 575 aa25.24■■□□□ 1.63
CCS-207ENST00000531990 NUCB1Q02818 461 aa25.24■■□□□ 1.63
CCS-207ENST00000531990 TSHZ3Q63HK5 1081 aa25.24■■□□□ 1.63
CCS-207ENST00000531990 MAGEB6Q8N7X4 407 aa25.24■■□□□ 1.63
CCS-207ENST00000531990 GBA2Q9HCG7 927 aaPredicted RBP25.24■■□□□ 1.63
CCS-207ENST00000531990 GLRX3O76003 335 aaKnown RBP25.23■■□□□ 1.63
CCS-207ENST00000531990 MAP4K4O95819 1239 aaPredicted RBP25.23■■□□□ 1.63
CCS-207ENST00000531990 CYP7A1P22680 504 aa25.23■■□□□ 1.63
CCS-207ENST00000531990 HTRA3P83110 453 aa25.23■■□□□ 1.63
CCS-207ENST00000531990 SUPT20HL1Q3ZLR7 823 aa25.23■■□□□ 1.63
CCS-207ENST00000531990 FAM83AQ86UY5 434 aa25.23■■□□□ 1.63
CCS-207ENST00000531990 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.23■■□□□ 1.634e-7■■■□□ 16.7
CCS-207ENST00000531990 PLCG2P16885 1265 aa25.22■■□□□ 1.63
CCS-207ENST00000531990 EDC3Q96F86 508 aaKnown RBP25.22■■□□□ 1.63
CCS-207ENST00000531990 TTLL12Q14166 644 aaPredicted RBP25.21■■□□□ 1.63
CCS-207ENST00000531990 SLC9C2Q5TAH2 1124 aa25.21■■□□□ 1.63
CCS-207ENST00000531990 MYH7P12883 1935 aa25.21■■□□□ 1.63
CCS-207ENST00000531990 SALL3Q9BXA9 1300 aa25.2■■□□□ 1.62
CCS-207ENST00000531990 FKBP1BP68106 108 aa25.2■■□□□ 1.62
CCS-207ENST00000531990 CERS3Q8IU89 383 aa25.2■■□□□ 1.62
CCS-207ENST00000531990 TMEM39BQ9GZU3 492 aa25.2■■□□□ 1.62
CCS-207ENST00000531990 AATFQ9NY61 560 aaKnown RBP eCLIP25.2■■□□□ 1.62
CCS-207ENST00000531990 TLL2Q9Y6L7 1015 aa25.2■■□□□ 1.62
CCS-207ENST00000531990 CNTNAP1P78357 1384 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 PAPPA2Q9BXP8 1791 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 PDE6AP16499 860 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 PDE1AP54750 535 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 PPP4CP60510 307 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 ZSCAN25Q6NSZ9 544 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 PI4K2BQ8TCG2 481 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 FAM151AQ8WW52 585 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 IDI2Q9BXS1 227 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 STAP2Q9UGK3 403 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 AK9Q5TCS8 1911 aa25.19■■□□□ 1.62
CCS-207ENST00000531990 TCP10Q12799 353 aa25.18■■□□□ 1.62
CCS-207ENST00000531990 NFIAQ12857 509 aa25.18■■□□□ 1.62
CCS-207ENST00000531990 NBPF12Q5TAG4 269 aaPredicted RBP25.18■■□□□ 1.62
CCS-207ENST00000531990 ADGRA1Q86SQ6 560 aa25.18■■□□□ 1.62
CCS-207ENST00000531990 HOOK2Q96ED9 719 aa25.18■■□□□ 1.62
CCS-207ENST00000531990 RPAP1Q9BWH6 1393 aaPredicted RBP25.18■■□□□ 1.62
CCS-207ENST00000531990 PPP1R12BO60237 982 aaPredicted RBP25.17■■□□□ 1.62
CCS-207ENST00000531990 ENTPD3O75355 529 aa25.17■■□□□ 1.62
CCS-207ENST00000531990 RGS3P49796 1198 aa25.17■■□□□ 1.62
CCS-207ENST00000531990 HUNKP57058 714 aa25.17■■□□□ 1.62
CCS-207ENST00000531990 RHBDL3P58872 404 aa25.17■■□□□ 1.62
CCS-207ENST00000531990 SAPCD2Q86UD0 394 aa25.17■■□□□ 1.62
CCS-207ENST00000531990 TEX11Q8IYF3 940 aa25.17■■□□□ 1.62
CCS-207ENST00000531990 ZNF532Q9HCE3 1301 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 RASSF10A6NK89 507 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 PICALMQ13492 652 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 DEFB115Q30KQ5 88 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 LRRFIP1Q32MZ4 808 aaKnown RBP25.16■■□□□ 1.62
CCS-207ENST00000531990 PAXIP1Q6ZW49 1069 aaPredicted RBP25.16■■□□□ 1.62
CCS-207ENST00000531990 ARMC9Q7Z3E5 817 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 KBTBD3Q8NAB2 608 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 MIGA1Q8NAN2 632 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 TEPSINQ96N21 525 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 FAM198AQ9UFP1 575 aa25.16■■□□□ 1.62
CCS-207ENST00000531990 WDHD1O75717 1129 aaPredicted RBP25.15■■□□□ 1.62
CCS-207ENST00000531990 PRKG1Q13976 671 aa25.15■■□□□ 1.62
CCS-207ENST00000531990 SH3RF3Q8TEJ3 882 aaPredicted RBP25.15■■□□□ 1.62
CCS-207ENST00000531990 MKRN1Q9UHC7 482 aaKnown RBP25.15■■□□□ 1.62
CCS-207ENST00000531990 RFX7Q2KHR2 1363 aa25.15■■□□□ 1.62
CCS-207ENST00000531990 NPM3O75607 178 aaKnown RBP25.14■■□□□ 1.62
CCS-207ENST00000531990 ADD2P35612 726 aa25.14■■□□□ 1.62
CCS-207ENST00000531990 HHIPL1Q96JK4 782 aa25.14■■□□□ 1.62
CCS-207ENST00000531990 MAGEB6P1A0A0J9YX57 407 aa25.13■■□□□ 1.61
CCS-207ENST00000531990 DYNLL1P63167 89 aaKnown RBP25.13■■□□□ 1.61
CCS-207ENST00000531990 UBE3CQ15386 1083 aa25.13■■□□□ 1.61
CCS-207ENST00000531990 ZSCAN29Q8IWY8 852 aaPredicted RBP25.13■■□□□ 1.61
CCS-207ENST00000531990 KLRG1Q96E93 195 aa25.13■■□□□ 1.61
CCS-207ENST00000531990 ANGEL1Q9UNK9 670 aaKnown RBP25.13■■□□□ 1.61
CCS-207ENST00000531990 SSC5DA1L4H1 1573 aa25.13■■□□□ 1.61
CCS-207ENST00000531990 CDK5RAP2Q96SN8 1893 aa25.13■■□□□ 1.61
CCS-207ENST00000531990 CEP350Q5VT06 3117 aa25.12■■□□□ 1.61
CCS-207ENST00000531990 PLEKHM2Q8IWE5 1019 aa25.12■■□□□ 1.61
CCS-207ENST00000531990 CDAN1Q8IWY9 1227 aa25.12■■□□□ 1.61
CCS-207ENST00000531990 CCDC136Q96JN2 1154 aa25.12■■□□□ 1.61
CCS-207ENST00000531990 FSD1Q9BTV5 496 aa25.12■■□□□ 1.61
CCS-207ENST00000531990 TCRBV5S4A2TA0A5A2 114 aa25.11■■□□□ 1.61
CCS-207ENST00000531990 UBE2Q2LH0YL09 131 aa25.11■■□□□ 1.61
CCS-207ENST00000531990 ZFYP08048 801 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms