RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 LPIN3Q9BQK8 851 aa5.79□□□□□ -1.48
ECHDC1-221ENST00000531582 BCL2L13Q9BXK5 485 aa5.79□□□□□ -1.48
ECHDC1-221ENST00000531582 KANSL3Q9P2N6 904 aa5.79□□□□□ -1.48
ECHDC1-221ENST00000531582 MAGEC2Q9UBF1 373 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-221ENST00000531582 MKL2Q9ULH7 1088 aa5.79□□□□□ -1.48
ECHDC1-221ENST00000531582 GOLGA6L6A8MZA4 724 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 SHISA8B8ZZ34 492 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 GOLGA6L22H0YM25 854 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 J3QW42 95 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 GADD45BO75293 160 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 TPM3P06753 285 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 MCM5P33992 734 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 NOP2P46087 812 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 PERM1Q5SV97 790 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 GJC2Q5T442 439 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 CCDC181Q5TID7 509 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 C20orf204Q6ZNR8 217 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 HFE2Q6ZVN8 426 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 APBB1IPQ7Z5R6 666 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 CCDC91Q7Z6B0 441 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 ZSCAN30Q86W11 494 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 BEND7Q8N7W2 519 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 ZCRB1Q8TBF4 217 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 WHAMMQ8TF30 809 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 TBC1D22AQ8WUA7 517 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 SCARF2Q96GP6 870 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 SMG9Q9H0W8 520 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 RANBP17Q9H2T7 1088 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 RRAGCQ9HB90 399 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 JPH1Q9HDC5 661 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 DZANK1Q9NVP4 752 aa5.78□□□□□ -1.48
ECHDC1-221ENST00000531582 CCDC189A1A4V9 331 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 M0R082 166 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 PDE2AO00408 941 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 XRCC6P12956 609 aaKnown RBP eCLIP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 XRCC5P13010 732 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 PTPRAP18433 802 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 CABP4P57796 275 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 PSMC1P62191 440 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 HMGN5P82970 282 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 XPCQ01831 940 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 C1QTNF12Q5T7M4 302 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 COL13A1Q5TAT6 717 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 CEP135Q66GS9 1140 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 SASS6Q6UVJ0 657 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 ZNF771Q7L3S4 317 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 FBXO33Q7Z6M2 555 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 PDCL2Q8N4E4 241 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 ZNF417Q8TAU3 575 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 ZNF587Q96SQ5 575 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 BHLHE41Q9C0J9 482 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 EHD4Q9H223 541 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 SUV39H2Q9H5I1 410 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 SRA1Q9HD15 236 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 NPHS2Q9NP85 383 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 STARD13Q9Y3M8 1113 aa5.77□□□□□ -1.49
ECHDC1-221ENST00000531582 UQCRHLA0A096LP55 91 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 A0A1W2PP55 124 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 RBM47A0AV96 593 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 ANKRD18BA2A2Z9 1011 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 GNB5O14775 395 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 CCP110O43303 1012 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 ALBP02768 609 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 POLR3DP05423 398 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 UQCRHP07919 91 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 MSNP26038 577 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 GNA15P30679 374 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 MAGEA8P43361 318 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 DGKGP49619 791 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 GSCP56915 257 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 PTPN12Q05209 780 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 HSP90AB2PQ58FF8 381 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 USPL1Q5W0Q7 1092 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 ZKSCAN2Q63HK3 967 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 ALYREFQ86V81 257 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 MAP4K3Q8IVH8 894 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 NXPE3Q969Y0 559 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 ADAM19Q9H013 955 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 RASSF4Q9H2L5 321 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 LIN7BQ9HAP6 207 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 NOP53Q9NZM5 478 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 STK26Q9P289 416 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 NAGPAQ9UK23 515 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 PPME1Q9Y570 386 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 PEG3Q9GZU2 1588 aa5.76□□□□□ -1.49
ECHDC1-221ENST00000531582 WRNQ14191 1432 aaPredicted RBP eCLIP5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 H0YHG0 523 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 RNF225M0QZC1 329 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 NFKBIEO00221 500 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 CAPN2P17655 700 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 PAX7P23759 505 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 CDC27P30260 824 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 GTF2F1P35269 517 aaKnown RBP eCLIP5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 AFF1P51825 1210 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 KIAA2012Q0VF49 1180 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 CCDC173Q0VFZ6 552 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 BECN1Q14457 450 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 RGL3Q3MIN7 710 aa5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.75□□□□□ -1.49
ECHDC1-221ENST00000531582 PEAR1Q5VY43 1037 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms