RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 BCL7CQ8WUZ0 217 aaPredicted RBP9.15□□□□□ -0.94
CASP4-210ENST00000531546 SF3B2Q13435 895 aaKnown RBP9.14□□□□□ -0.95
CASP4-210ENST00000531546 ZNF423Q2M1K9 1284 aa9.14□□□□□ -0.95
CASP4-210ENST00000531546 GSX1Q9H4S2 264 aaPredicted RBP9.14□□□□□ -0.95
CASP4-210ENST00000531546 LIN7BQ9HAP6 207 aa9.14□□□□□ -0.95
CASP4-210ENST00000531546 FANCD2Q9BXW9 1451 aa9.14□□□□□ -0.95
CASP4-210ENST00000531546 CTSBP07858 339 aa9.13□□□□□ -0.95
CASP4-210ENST00000531546 CYP27C1Q4G0S4 372 aa9.13□□□□□ -0.95
CASP4-210ENST00000531546 OGFOD3Q6PK18 319 aa9.13□□□□□ -0.95
CASP4-210ENST00000531546 SEZ6L2Q6UXD5 910 aa9.13□□□□□ -0.95
CASP4-210ENST00000531546 DAGLAQ9Y4D2 1042 aa9.13□□□□□ -0.95
CASP4-210ENST00000531546 FZD6O60353 706 aa9.12□□□□□ -0.95
CASP4-210ENST00000531546 SSFA2P28290 1259 aa9.12□□□□□ -0.95
CASP4-210ENST00000531546 ZNF792Q3KQV3 632 aa9.12□□□□□ -0.95
CASP4-210ENST00000531546 GALNT12Q8IXK2 581 aa9.12□□□□□ -0.95
CASP4-210ENST00000531546 C1GALT1Q9NS00 363 aa9.12□□□□□ -0.95
CASP4-210ENST00000531546 CHD1O14646 1710 aa9.11□□□□□ -0.95
CASP4-210ENST00000531546 SYNGAP1Q96PV0 1343 aa9.11□□□□□ -0.95
CASP4-210ENST00000531546 A0A1W2PP55 124 aa9.11□□□□□ -0.95
CASP4-210ENST00000531546 B3GALT4O96024 378 aa9.11□□□□□ -0.95
CASP4-210ENST00000531546 POLR3DP05423 398 aaPredicted RBP9.11□□□□□ -0.95
CASP4-210ENST00000531546 GRIA4P48058 902 aa9.11□□□□□ -0.95
CASP4-210ENST00000531546 ZNF574Q6ZN55 896 aaPredicted RBP9.11□□□□□ -0.95
CASP4-210ENST00000531546 TCF12Q99081 682 aa9.11□□□□□ -0.95
CASP4-210ENST00000531546 TRIM56Q9BRZ2 755 aaKnown RBP9.11□□□□□ -0.95
CASP4-210ENST00000531546 PDE3AQ14432 1141 aa9.1□□□□□ -0.95
CASP4-210ENST00000531546 AOC2O75106 756 aa9.09□□□□□ -0.95
CASP4-210ENST00000531546 HNRNPUQ00839 825 aaKnown RBP eCLIP9.09□□□□□ -0.95
CASP4-210ENST00000531546 SPRED3Q2MJR0 410 aa9.09□□□□□ -0.95
CASP4-210ENST00000531546 ATG4DQ86TL0 474 aaPredicted RBP9.09□□□□□ -0.95
CASP4-210ENST00000531546 ZNF608Q9ULD9 1512 aaPredicted RBP9.09□□□□□ -0.95
CASP4-210ENST00000531546 FKBP4Q02790 459 aaKnown RBP eCLIP9.08□□□□□ -0.96
CASP4-210ENST00000531546 AP3B2Q13367 1082 aa9.08□□□□□ -0.96
CASP4-210ENST00000531546 ZNF648Q5T619 568 aaPredicted RBP9.08□□□□□ -0.96
CASP4-210ENST00000531546 WFDC3Q8IUB2 231 aa9.08□□□□□ -0.96
CASP4-210ENST00000531546 WDR18Q9BV38 432 aa9.08□□□□□ -0.96
CASP4-210ENST00000531546 ZNF576Q9H609 170 aa9.08□□□□□ -0.96
CASP4-210ENST00000531546 URB2Q14146 1524 aaKnown RBP9.07□□□□□ -0.96
CASP4-210ENST00000531546 DYNC1LI2O43237 492 aaPredicted RBP9.07□□□□□ -0.96
CASP4-210ENST00000531546 ECEL1O95672 775 aa9.07□□□□□ -0.96
CASP4-210ENST00000531546 NEFLP07196 543 aa9.07□□□□□ -0.96
CASP4-210ENST00000531546 PKN1Q16512 942 aa9.07□□□□□ -0.96
CASP4-210ENST00000531546 NETO1Q8TDF5 533 aa9.07□□□□□ -0.96
CASP4-210ENST00000531546 CCDC87Q9NVE4 849 aa9.07□□□□□ -0.96
CASP4-210ENST00000531546 RSF1Q96T23 1441 aaPredicted RBP9.06□□□□□ -0.96
CASP4-210ENST00000531546 TMEM88BA6NKF7 163 aa9.06□□□□□ -0.96
CASP4-210ENST00000531546 DBX1A6NMT0 343 aa9.06□□□□□ -0.96
CASP4-210ENST00000531546 FARP2O94887 1054 aaPredicted RBP9.06□□□□□ -0.96
CASP4-210ENST00000531546 FUT4P22083 530 aa9.06□□□□□ -0.96
CASP4-210ENST00000531546 SPRED2Q7Z698 418 aa9.06□□□□□ -0.96
CASP4-210ENST00000531546 PIDD1Q9HB75 910 aa9.06□□□□□ -0.96
CASP4-210ENST00000531546 RC3H2Q9HBD1 1191 aaKnown RBP9.06□□□□□ -0.96
CASP4-210ENST00000531546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.06□□□□□ -0.96
CASP4-210ENST00000531546 PEG3Q9GZU2 1588 aa9.06□□□□□ -0.96
CASP4-210ENST00000531546 ITPKAP23677 461 aa9.05□□□□□ -0.96
CASP4-210ENST00000531546 KIAA0319Q5VV43 1072 aa9.05□□□□□ -0.96
CASP4-210ENST00000531546 FAM168AQ92567 244 aa9.05□□□□□ -0.96
CASP4-210ENST00000531546 KRTAP4-9Q9BYQ8 210 aa9.05□□□□□ -0.96
CASP4-210ENST00000531546 ATXN3LQ9H3M9 355 aa9.05□□□□□ -0.96
CASP4-210ENST00000531546 LGR6Q9HBX8 967 aa9.05□□□□□ -0.96
CASP4-210ENST00000531546 CARMIL2Q6F5E8 1435 aa9.05□□□□□ -0.96
CASP4-210ENST00000531546 ABL1P00519 1130 aa9.04□□□□□ -0.96
CASP4-210ENST00000531546 FAM87AP0C7U9 286 aa9.04□□□□□ -0.96
CASP4-210ENST00000531546 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
CASP4-210ENST00000531546 EHD4Q9H223 541 aa9.04□□□□□ -0.96
CASP4-210ENST00000531546 VAV3Q9UKW4 847 aa9.04□□□□□ -0.96
CASP4-210ENST00000531546 EIF4G3O43432 1585 aaKnown RBP9.03□□□□□ -0.96
CASP4-210ENST00000531546 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
CASP4-210ENST00000531546 BNIP3Q12983 259 aa9.03□□□□□ -0.96
CASP4-210ENST00000531546 PLD6Q8N2A8 252 aaKnown RBP9.03□□□□□ -0.96
CASP4-210ENST00000531546 GLIS3Q8NEA6 775 aa9.03□□□□□ -0.96
CASP4-210ENST00000531546 PPP1R9AQ9ULJ8 1098 aa9.03□□□□□ -0.96
CASP4-210ENST00000531546 CD8BP10966 210 aa9.02□□□□□ -0.97
CASP4-210ENST00000531546 PRKCQQ04759 706 aa9.02□□□□□ -0.97
CASP4-210ENST00000531546 TMEM40Q8WWA1 233 aa9.02□□□□□ -0.97
CASP4-210ENST00000531546 MKNK2Q9HBH9 465 aa9.02□□□□□ -0.97
CASP4-210ENST00000531546 IFT140Q96RY7 1462 aa9.02□□□□□ -0.97
CASP4-210ENST00000531546 RNASE1P07998 156 aaKnown RBP9.01□□□□□ -0.97
CASP4-210ENST00000531546 SLFN14P0C7P3 912 aa9.01□□□□□ -0.97
CASP4-210ENST00000531546 ID3Q02535 119 aa9.01□□□□□ -0.97
CASP4-210ENST00000531546 CDK5R2Q13319 367 aa9.01□□□□□ -0.97
CASP4-210ENST00000531546 ZNF211Q13398 564 aaPredicted RBP9.01□□□□□ -0.97
CASP4-210ENST00000531546 ZNF124Q15973 351 aa9.01□□□□□ -0.97
CASP4-210ENST00000531546 IFI16Q16666 785 aaKnown RBP9.01□□□□□ -0.97
CASP4-210ENST00000531546 ARHGAP27Q6ZUM4 889 aa9.01□□□□□ -0.97
CASP4-210ENST00000531546 KSR1Q8IVT5 923 aa9.01□□□□□ -0.97
CASP4-210ENST00000531546 SLC38A3Q99624 504 aa9.01□□□□□ -0.97
CASP4-210ENST00000531546 CRIM1Q9NZV1 1036 aa9.01□□□□□ -0.97
CASP4-210ENST00000531546 FAM181AQ8N9Y4 354 aa9□□□□□ -0.97
CASP4-210ENST00000531546 PI4K2BQ8TCG2 481 aa9□□□□□ -0.97
CASP4-210ENST00000531546 HRASLS5Q96KN8 279 aa9□□□□□ -0.97
CASP4-210ENST00000531546 FANCD2OSQ96PS1 177 aa9□□□□□ -0.97
CASP4-210ENST00000531546 NPHS2Q9NP85 383 aa9□□□□□ -0.97
CASP4-210ENST00000531546 BRPF3Q9ULD4 1205 aa9□□□□□ -0.97
CASP4-210ENST00000531546 PPP1R15AO75807 674 aaPredicted RBP8.99□□□□□ -0.97
CASP4-210ENST00000531546 FBLN7Q53RD9 439 aa8.99□□□□□ -0.97
CASP4-210ENST00000531546 RPS26P11Q5JNZ5 115 aaPredicted RBP8.99□□□□□ -0.97
CASP4-210ENST00000531546 SMYD4Q8IYR2 804 aaPredicted RBP8.99□□□□□ -0.97
CASP4-210ENST00000531546 ANO2Q9NQ90 1003 aa8.99□□□□□ -0.97
CASP4-210ENST00000531546 MBNL3Q9NUK0 354 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms