RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 HDLBPQ00341 1268 aaKnown RBP22.82■■□□□ 1.24
SMPD1-205ENST00000531303 SH3RF3Q8TEJ3 882 aaPredicted RBP22.82■■□□□ 1.24
SMPD1-205ENST00000531303 CNOT7Q9UIV1 285 aaKnown RBP22.82■■□□□ 1.24
SMPD1-205ENST00000531303 SLC4A4Q9Y6R1 1079 aa22.82■■□□□ 1.24
SMPD1-205ENST00000531303 EIF5BO60841 1220 aaKnown RBP22.81■■□□□ 1.24
SMPD1-205ENST00000531303 RBM26Q5T8P6 1007 aaKnown RBP22.81■■□□□ 1.24
SMPD1-205ENST00000531303 MICALL2Q8IY33 904 aa22.81■■□□□ 1.24
SMPD1-205ENST00000531303 ZDHHC15Q96MV8 337 aa22.81■■□□□ 1.24
SMPD1-205ENST00000531303 MRIQ9BWK5 157 aa22.81■■□□□ 1.24
SMPD1-205ENST00000531303 UPF2Q9HAU5 1272 aaKnown RBP22.81■■□□□ 1.24
SMPD1-205ENST00000531303 HSPD1P10809 573 aaKnown RBP22.8■■□□□ 1.24
SMPD1-205ENST00000531303 PPP4CP60510 307 aa22.8■■□□□ 1.24
SMPD1-205ENST00000531303 DLGAP5Q15398 846 aa22.8■■□□□ 1.24
SMPD1-205ENST00000531303 APOBEC3HQ6NTF7 200 aaKnown RBP22.8■■□□□ 1.24
SMPD1-205ENST00000531303 SDR42E1Q8WUS8 393 aa22.8■■□□□ 1.24
SMPD1-205ENST00000531303 DPF2Q92785 391 aa22.8■■□□□ 1.24
SMPD1-205ENST00000531303 USP26Q9BXU7 913 aa22.8■■□□□ 1.24
SMPD1-205ENST00000531303 USP40Q9NVE5 1235 aa22.8■■□□□ 1.24
SMPD1-205ENST00000531303 DPY19L2Q6NUT2 758 aa22.79■■□□□ 1.24
SMPD1-205ENST00000531303 CRNKL1Q9BZJ0 848 aaKnown RBP22.79■■□□□ 1.24
SMPD1-205ENST00000531303 CDC42EP5Q6NZY7 148 aa22.79■■□□□ 1.24
SMPD1-205ENST00000531303 TEX11Q8IYF3 940 aa22.79■■□□□ 1.24
SMPD1-205ENST00000531303 PRMT6Q96LA8 375 aaPredicted RBP22.79■■□□□ 1.24
SMPD1-205ENST00000531303 PATL2C9JE40 543 aaKnown RBP22.78■■□□□ 1.24
SMPD1-205ENST00000531303 PLCG2P16885 1265 aa22.78■■□□□ 1.24
SMPD1-205ENST00000531303 GNAT2P19087 354 aa22.78■■□□□ 1.24
SMPD1-205ENST00000531303 RHBDL3P58872 404 aa22.78■■□□□ 1.24
SMPD1-205ENST00000531303 SAMD7Q7Z3H4 446 aa22.78■■□□□ 1.24
SMPD1-205ENST00000531303 MYOZ2Q9NPC6 264 aa22.78■■□□□ 1.24
SMPD1-205ENST00000531303 RBM8AQ9Y5S9 174 aaKnown RBP22.78■■□□□ 1.24
SMPD1-205ENST00000531303 GSG1L2A8MUP6 293 aa22.77■■□□□ 1.24
SMPD1-205ENST00000531303 H7C1D1 291 aa22.77■■□□□ 1.24
SMPD1-205ENST00000531303 FOXP2O15409 715 aa22.77■■□□□ 1.24
SMPD1-205ENST00000531303 USP5P45974 858 aa22.77■■□□□ 1.24
SMPD1-205ENST00000531303 ZNF280AP59817 542 aaPredicted RBP22.77■■□□□ 1.24
SMPD1-205ENST00000531303 TBC1D10BQ4KMP7 808 aaPredicted RBP22.77■■□□□ 1.24
SMPD1-205ENST00000531303 TGFBRAP1Q8WUH2 860 aa22.77■■□□□ 1.24
SMPD1-205ENST00000531303 MAP4K1Q92918 833 aa22.77■■□□□ 1.24
SMPD1-205ENST00000531303 DSCC1Q9BVC3 393 aa22.77■■□□□ 1.24
SMPD1-205ENST00000531303 TDRD3Q9H7E2 651 aaKnown RBP22.77■■□□□ 1.24
SMPD1-205ENST00000531303 GPRC5DQ9NZD1 345 aa22.77■■□□□ 1.24
SMPD1-205ENST00000531303 CDK5RAP2Q96SN8 1893 aa22.77■■□□□ 1.23
SMPD1-205ENST00000531303 BAZ2AQ9UIF9 1905 aaKnown RBP22.76■■□□□ 1.23
SMPD1-205ENST00000531303 EPS15P42566 896 aa22.76■■□□□ 1.23
SMPD1-205ENST00000531303 ECM29Q5VYK3 1845 aa22.76■■□□□ 1.23
SMPD1-205ENST00000531303 SPDYE2BA6NHP3 402 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 EGFRP00533 1210 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 SPDYE6P0CI01 402 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 LMOD1P29536 600 aaPredicted RBP22.75■■□□□ 1.23
SMPD1-205ENST00000531303 TDO2P48775 406 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 CACNB3P54284 484 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 MAPKAPK5Q8IW41 473 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 IFNL3Q8IZI9 196 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 C22orf23Q9BZE7 217 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 NACAP1Q9BZK3 213 aa22.75■■□□□ 1.23
SMPD1-205ENST00000531303 EPB41L4AQ9HCS5 686 aaPredicted RBP22.75■■□□□ 1.23
SMPD1-205ENST00000531303 U3KPZ7 1027 aaPredicted RBP22.75■■□□□ 1.23
SMPD1-205ENST00000531303 ZC3H4Q9UPT8 1303 aaKnown RBP22.75■■□□□ 1.23
SMPD1-205ENST00000531303 CLRN2A0PK11 232 aa22.74■■□□□ 1.23
SMPD1-205ENST00000531303 FGAP02671 866 aa22.74■■□□□ 1.23
SMPD1-205ENST00000531303 PICALMQ13492 652 aa22.74■■□□□ 1.23
SMPD1-205ENST00000531303 CERS3Q8IU89 383 aa22.74■■□□□ 1.23
SMPD1-205ENST00000531303 NAPBQ9H115 298 aa22.74■■□□□ 1.23
SMPD1-205ENST00000531303 GLTPD2A6NH11 291 aa22.73■■□□□ 1.23
SMPD1-205ENST00000531303 KIF4BQ2VIQ3 1234 aa22.73■■□□□ 1.23
SMPD1-205ENST00000531303 NBPF9Q3BBW0 867 aa22.73■■□□□ 1.23
SMPD1-205ENST00000531303 MCCP23508 829 aa22.73■■□□□ 1.23
SMPD1-205ENST00000531303 SLC4A8Q2Y0W8 1093 aa22.73■■□□□ 1.23
SMPD1-205ENST00000531303 MTMR14Q8NCE2 650 aa22.73■■□□□ 1.23
SMPD1-205ENST00000531303 DDRGK1Q96HY6 314 aa22.73■■□□□ 1.23
SMPD1-205ENST00000531303 DCP1AQ9NPI6 582 aaPredicted RBP22.73■■□□□ 1.23
SMPD1-205ENST00000531303 SAP30BPQ9UHR5 308 aaKnown RBP22.73■■□□□ 1.23
SMPD1-205ENST00000531303 WNT10BO00744 389 aa22.72■■□□□ 1.23
SMPD1-205ENST00000531303 WDHD1O75717 1129 aaPredicted RBP22.72■■□□□ 1.23
SMPD1-205ENST00000531303 MMP14P50281 582 aa22.72■■□□□ 1.23
SMPD1-205ENST00000531303 HAND2P61296 217 aa22.72■■□□□ 1.23
SMPD1-205ENST00000531303 NFIAQ12857 509 aa22.72■■□□□ 1.23
SMPD1-205ENST00000531303 ATP8A2Q9NTI2 1148 aa22.72■■□□□ 1.23
SMPD1-205ENST00000531303 ZNF70Q9UC06 446 aaPredicted RBP22.72■■□□□ 1.23
SMPD1-205ENST00000531303 CTNNA3Q9UI47 895 aa22.72■■□□□ 1.23
SMPD1-205ENST00000531303 MYO1BO43795 1136 aa22.71■■□□□ 1.23
SMPD1-205ENST00000531303 NECTIN1Q15223 517 aa22.71■■□□□ 1.23
SMPD1-205ENST00000531303 TRPM4Q8TD43 1214 aa22.71■■□□□ 1.23
SMPD1-205ENST00000531303 ZBED3Q96IU2 234 aaPredicted RBP22.71■■□□□ 1.23
SMPD1-205ENST00000531303 VEZTQ9HBM0 779 aa22.71■■□□□ 1.23
SMPD1-205ENST00000531303 DDX4Q9NQI0 724 aaKnown RBP22.71■■□□□ 1.23
SMPD1-205ENST00000531303 MCM9Q9NXL9 1143 aa22.71■■□□□ 1.23
SMPD1-205ENST00000531303 TMOD2Q9NZR1 351 aa22.71■■□□□ 1.23
SMPD1-205ENST00000531303 PALD1Q9ULE6 856 aa22.71■■□□□ 1.23
SMPD1-205ENST00000531303 RPAP1Q9BWH6 1393 aaPredicted RBP22.71■■□□□ 1.23
SMPD1-205ENST00000531303 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
SMPD1-205ENST00000531303 MYH1P12882 1939 aa22.7■■□□□ 1.22
SMPD1-205ENST00000531303 FOCADQ5VW36 1801 aa22.7■■□□□ 1.22
SMPD1-205ENST00000531303 FLT1P17948 1338 aa22.7■■□□□ 1.22
SMPD1-205ENST00000531303 CYP2D7A0A087X1C5 515 aa22.7■■□□□ 1.22
SMPD1-205ENST00000531303 MINDY4BA8MYZ0 360 aa22.7■■□□□ 1.22
SMPD1-205ENST00000531303 HSPA4P34932 840 aa22.7■■□□□ 1.22
SMPD1-205ENST00000531303 TCP10Q12799 353 aa22.7■■□□□ 1.22
SMPD1-205ENST00000531303 ALX1Q15699 326 aa22.7■■□□□ 1.22
SMPD1-205ENST00000531303 CREB3L3Q68CJ9 461 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms