RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
TRIM3-210ENST00000530724 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 ICE2Q659A1 982 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 KANK3Q6NY19 840 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 ZNF530Q6P9A1 599 aaPredicted RBP13.43□□□□□ -0.26
TRIM3-210ENST00000530724 ZNF662Q6ZS27 426 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 RASGRP2Q7LDG7 609 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
TRIM3-210ENST00000530724 CTCFLQ8NI51 663 aaPredicted RBP13.43□□□□□ -0.26
TRIM3-210ENST00000530724 DPF2Q92785 391 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
TRIM3-210ENST00000530724 BCL9LQ86UU0 1499 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 DTNBO60941 627 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 WDHD1O75717 1129 aaPredicted RBP13.42□□□□□ -0.26
TRIM3-210ENST00000530724 CLSTN1O94985 981 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 LTKP29376 864 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 NR1I3Q14994 352 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 CFAP100Q494V2 611 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 CCDC102BQ68D86 513 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 SHC4Q6S5L8 630 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 PPM1EQ8WY54 764 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 RSPH14Q9UHP6 348 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 AMOTL2Q9Y2J4 779 aa13.42□□□□□ -0.26
TRIM3-210ENST00000530724 MAST3O60307 1309 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 GUCY2CP25092 1073 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 TFCP2Q12800 502 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 MORC3Q14149 939 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 EPHA10Q5JZY3 1008 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 RPAINQ86UA6 219 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
TRIM3-210ENST00000530724 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
TRIM3-210ENST00000530724 DHX58Q96C10 678 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
TRIM3-210ENST00000530724 PAG1Q9NWQ8 432 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 TTF2Q9UNY4 1162 aaKnown RBP13.41□□□□□ -0.26
TRIM3-210ENST00000530724 ADGRG1Q9Y653 693 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 PXDNQ92626 1479 aa13.41□□□□□ -0.26
TRIM3-210ENST00000530724 ZMYM6O95789 1325 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 ATXN2Q99700 1313 aaKnown RBP13.4□□□□□ -0.26
TRIM3-210ENST00000530724 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
TRIM3-210ENST00000530724 NPHP1O15259 732 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 SHOX2O60902 331 aaPredicted RBP13.4□□□□□ -0.26
TRIM3-210ENST00000530724 PPFIA4O75335 1185 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 IL15P40933 162 aaPredicted RBP13.4□□□□□ -0.26
TRIM3-210ENST00000530724 APTXQ7Z2E3 356 aaKnown RBP13.4□□□□□ -0.26
TRIM3-210ENST00000530724 EFCAB13Q8IY85 973 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 RPGRIP1Q96KN7 1286 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 SLC26A8Q96RN1 970 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 DBNDD2Q9BQY9 259 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 FANCLQ9NW38 375 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRIM3-210ENST00000530724 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 LTN1O94822 1766 aa13.4□□□□□ -0.26
TRIM3-210ENST00000530724 ATRNO75882 1429 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 A0A087WWV3 80 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 A6NNZ2 444 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 KIF28PB7ZC32 967 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 AKR1B15C9JRZ8 316 aaPredicted RBP13.39□□□□□ -0.27
TRIM3-210ENST00000530724 KIF5CO60282 957 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 LMAN1P49257 510 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 RCAN1P53805 252 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
TRIM3-210ENST00000530724 TUBB8Q3ZCM7 444 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 EDC3Q96F86 508 aaKnown RBP13.39□□□□□ -0.27
TRIM3-210ENST00000530724 CTAGE1Q96RT6 745 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 SEC62Q99442 399 aaKnown RBP13.39□□□□□ -0.27
TRIM3-210ENST00000530724 MTA3Q9BTC8 594 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 NCOA5Q9HCD5 579 aaKnown RBP13.39□□□□□ -0.27
TRIM3-210ENST00000530724 ZCCHC17Q9NP64 241 aaKnown RBP13.39□□□□□ -0.27
TRIM3-210ENST00000530724 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
TRIM3-210ENST00000530724 VGLL3A8MV65 326 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 TMEM232C9JQI7 657 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 FOXP2O15409 715 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 ANXA1P04083 346 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 BMP6P22004 513 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
TRIM3-210ENST00000530724 PLCD1P51178 756 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
TRIM3-210ENST00000530724 CCT2P78371 535 aaKnown RBP13.38□□□□□ -0.27
TRIM3-210ENST00000530724 AMPD2Q01433 879 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 TRIM14Q14142 442 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 IMMTQ16891 758 aaKnown RBP13.38□□□□□ -0.27
TRIM3-210ENST00000530724 TAF7LQ5H9L4 462 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 CDKAL1Q5VV42 579 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 TOGARAM2Q6ZUX3 1019 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 FOXP4Q8IVH2 680 aaPredicted RBP13.38□□□□□ -0.27
TRIM3-210ENST00000530724 LCMT1Q9UIC8 334 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 TBC1D2BQ9UPU7 963 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 PCDHA5Q9Y5H7 936 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 C4AP0C0L4 1744 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
TRIM3-210ENST00000530724 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 H7C1W4 665 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 PTPREP23469 700 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 SEMA3FQ13275 785 aa13.37□□□□□ -0.27
TRIM3-210ENST00000530724 TTC31Q49AM3 519 aaPredicted RBP13.37□□□□□ -0.27
TRIM3-210ENST00000530724 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms