RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 GRAMD1CQ8IYS0 662 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 CACTINQ8WUQ7 758 aaKnown RBP14.15□□□□□ -0.14
SCN3B-206ENST00000530277 KRT23Q9C075 422 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 PUF60Q9UHX1 559 aaKnown RBP14.15□□□□□ -0.14
SCN3B-206ENST00000530277 NBPF26B4DH59 902 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 NBPF14Q5TI25 921 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 NBPF10Q6P3W6 841 aaKnown RBP14.15□□□□□ -0.14
SCN3B-206ENST00000530277 NBPF15Q8N660 670 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 SPATA5Q8NB90 893 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 PGBD1Q96JS3 809 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 SETDB2Q96T68 719 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 CENPHQ9H3R5 247 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 PFKFB1P16118 471 aa14.15□□□□□ -0.15
SCN3B-206ENST00000530277 NLRP3Q96P20 1036 aa14.15□□□□□ -0.15
SCN3B-206ENST00000530277 PFKFB2O60825 505 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 PUM3Q15397 648 aaKnown RBP14.14□□□□□ -0.15
SCN3B-206ENST00000530277 FAM98CQ17RN3 349 aaKnown RBP14.14□□□□□ -0.15
SCN3B-206ENST00000530277 CCDC178Q5BJE1 867 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 FKBP15Q5T1M5 1219 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 RIMBP2O15034 1052 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 ELF2Q15723 593 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 TCEAL9Q9UHQ7 104 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 PDE8AO60658 829 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 FANCCQ00597 558 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 STOX1Q6ZVD7 989 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 VPS16Q9H269 839 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 BLZF1Q9H2G9 400 aa14.14□□□□□ -0.15
SCN3B-206ENST00000530277 CFAP74Q9C0B2 1584 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 ZNF500O60304 480 aaPredicted RBP14.13□□□□□ -0.15
SCN3B-206ENST00000530277 GTF2F1P35269 517 aaKnown RBP eCLIP14.13□□□□□ -0.15
SCN3B-206ENST00000530277 ADKP55263 362 aaKnown RBP14.13□□□□□ -0.15
SCN3B-206ENST00000530277 MCM6Q14566 821 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 CCDC70Q6NSX1 233 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 PIK3AP1Q6ZUJ8 805 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 KRI1Q8N9T8 703 aaKnown RBP14.13□□□□□ -0.15
SCN3B-206ENST00000530277 DSCC1Q9BVC3 393 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 NRXN1Q9ULB1 1477 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 GNPATO15228 680 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 ZSCAN12O43309 604 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 CDC25AP30304 524 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 RFC4P35249 363 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 DDIT3P35638 169 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 CTSWP56202 376 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 ZMYM1Q5SVZ6 1142 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 DESI2Q9BSY9 194 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 NFE2L3Q9Y4A8 694 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 MAP2P11137 1827 aaKnown RBP14.13□□□□□ -0.15
SCN3B-206ENST00000530277 CCP110O43303 1012 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 PHACTR2O75167 634 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 TSPY3P0CV98 308 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 TSPY8P0CW00 308 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 PIGBQ92521 554 aa14.13□□□□□ -0.15
SCN3B-206ENST00000530277 RPGRQ92834 1020 aaKnown RBP14.13□□□□□ -0.15
SCN3B-206ENST00000530277 CCDC43Q96MW1 224 aaKnown RBP14.13□□□□□ -0.15
SCN3B-206ENST00000530277 LMTK2Q8IWU2 1503 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 MTIF2P46199 727 aaKnown RBP14.12□□□□□ -0.15
SCN3B-206ENST00000530277 NR5A1Q13285 461 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 MYRIPQ8NFW9 859 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 TRIM47Q96LD4 638 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 HINFPQ9BQA5 517 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 SEC63Q9UGP8 760 aaKnown RBP14.12□□□□□ -0.15
SCN3B-206ENST00000530277 KIF5CO60282 957 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 MYL5Q02045 173 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 PDE4BQ07343 736 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 SPTY2D1Q68D10 685 aaPredicted RBP14.12□□□□□ -0.15
SCN3B-206ENST00000530277 KAZALD1Q96I82 304 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 PATL2C9JE40 543 aaKnown RBP14.12□□□□□ -0.15
SCN3B-206ENST00000530277 USP17L12C9JPN9 530 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 USP17L21D6R901 530 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 BRAPQ7Z569 592 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 FBXO18Q8NFZ0 1043 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 KIAA1468Q9P260 1216 aa14.12□□□□□ -0.15
SCN3B-206ENST00000530277 CAVIN2O95810 425 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 MTX1Q13505 466 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 LLPHQ9BRT6 129 aaKnown RBP14.11□□□□□ -0.15
SCN3B-206ENST00000530277 CRNKL1Q9BZJ0 848 aaKnown RBP14.11□□□□□ -0.15
SCN3B-206ENST00000530277 CNNM2Q9H8M5 875 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 SMYD4Q8IYR2 804 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-206ENST00000530277 IFNL3Q8IZI9 196 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 SEPT11Q9NVA2 429 aaKnown RBP14.11□□□□□ -0.15
SCN3B-206ENST00000530277 SERTAD1Q9UHV2 236 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 DENND2AQ9ULE3 1009 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 CEP170BQ9Y4F5 1589 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-206ENST00000530277 ZC3H13Q5T200 1668 aaKnown RBP14.11□□□□□ -0.15
SCN3B-206ENST00000530277 ARID5AQ03989 594 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 CRACR2BQ8N4Y2 399 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-206ENST00000530277 ZBTB38Q8NAP3 1195 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-206ENST00000530277 LPIN2Q92539 896 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 RUFY1Q96T51 708 aa14.11□□□□□ -0.15
SCN3B-206ENST00000530277 NEMFO60524 1076 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 ATP1A3P13637 1013 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 STAT6P42226 847 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 TAF3Q5VWG9 929 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 FANCLQ9NW38 375 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 ZNF215Q9UL58 517 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-206ENST00000530277 PAXBP1Q9Y5B6 917 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 OVOS2A0A0J9YW53 1432 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 OVOS2Q6IE36 1432 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 PTPRUQ92729 1446 aa14.1□□□□□ -0.15
SCN3B-206ENST00000530277 COL3A1P02461 1466 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms