RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 ANTXR1Q9H6X2 564 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 ELP3Q9H9T3 547 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 SERPINA10Q9UK55 444 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 PCDHB15Q9Y5E8 787 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 CACNA1FO60840 1977 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 LDHCP07864 332 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 SLURP2P0DP57 97 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 NFIAQ12857 509 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 TEX11Q8IYF3 940 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 CLMNQ96JQ2 1002 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 SAP30BPQ9UHR5 308 aaKnown RBP5.63□□□□□ -1.51
USP47-208ENST00000529813 CSADQ9Y600 493 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 SPEF2Q9C093 1822 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 USP5P45974 858 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 IREB2P48200 963 aaKnown RBP5.62□□□□□ -1.51
USP47-208ENST00000529813 RGS3P49796 1198 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 KIF23Q02241 960 aaPredicted RBP5.62□□□□□ -1.51
USP47-208ENST00000529813 CDC42EP5Q6NZY7 148 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 MAGEB6Q8N7X4 407 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 WRNIP1Q96S55 665 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 TLL2Q9Y6L7 1015 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 LBX1P52954 281 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 GSTO1P78417 241 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 MAP3K12Q12852 859 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 SPDYE2Q495Y8 402 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 APOBEC3HQ6NTF7 200 aaKnown RBP5.62□□□□□ -1.51
USP47-208ENST00000529813 SAMD1Q6SPF0 538 aaPredicted RBP5.62□□□□□ -1.51
USP47-208ENST00000529813 TGFBRAP1Q8WUH2 860 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 OTUD5Q96G74 571 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 GPATCH3Q96I76 525 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 CSRNP1Q96S65 589 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 LNPKQ9C0E8 428 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 PIH1D3Q9NQM4 214 aaKnown RBP5.62□□□□□ -1.51
USP47-208ENST00000529813 IRS2Q9Y4H2 1338 aa5.62□□□□□ -1.51
USP47-208ENST00000529813 CNTNAP1P78357 1384 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 SEMA3EO15041 775 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 RAB11FIP3O75154 756 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 BAG3O95817 575 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 CYP2E1P05181 493 aaPredicted RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 DYNLL1P63167 89 aaKnown RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 SLFNL1Q499Z3 407 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 SLC9C2Q5TAH2 1124 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 CRACR2BQ8N4Y2 399 aaPredicted RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 ZKSCAN4Q969J2 545 aaPredicted RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 PGAP2Q9UHJ9 254 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 NOP58Q9Y2X3 529 aaKnown RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 SCN9AQ15858 1988 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 RAD21O60216 631 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 NEFLP07196 543 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 MAP2K1Q02750 393 aaPredicted RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 NOGQ13253 232 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 ZFPM1Q8IX07 1006 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 CCDC102AQ96A19 550 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 MYH3P11055 1940 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 RASSF10A6NK89 507 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 TRIM6-TRIM34B2RNG4 842 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 FOXN1O15353 648 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 APPP05067 770 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 HHIPL2Q6UWX4 724 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 CCDC84Q86UT8 332 aaPredicted RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 OTUD7AQ8TE49 926 aaPredicted RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 SH3RF3Q8TEJ3 882 aaPredicted RBP5.61□□□□□ -1.51
USP47-208ENST00000529813 ZDHHC15Q96MV8 337 aa5.61□□□□□ -1.51
USP47-208ENST00000529813 WDR90Q96KV7 1748 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 FKBP1AP62942 108 aaKnown RBP5.6□□□□□ -1.51
USP47-208ENST00000529813 DCAF15Q66K64 600 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 RILPL2Q969X0 211 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 CHMP4CQ96CF2 233 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 RWDD1Q9H446 243 aaPredicted RBP5.6□□□□□ -1.51
USP47-208ENST00000529813 GPR108Q9NPR9 543 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 ISY1Q9ULR0 285 aaKnown RBP5.6□□□□□ -1.51
USP47-208ENST00000529813 MROH7-TTC4A0A0A0MT08 1334 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 PITPNM2Q9BZ72 1349 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 TBC1D8O95759 1140 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 POLR3DP05423 398 aaPredicted RBP5.6□□□□□ -1.51
USP47-208ENST00000529813 ARID4AP29374 1257 aaPredicted RBP5.6□□□□□ -1.51
USP47-208ENST00000529813 INPP5BP32019 993 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 NSUN4Q96CB9 384 aaKnown RBP5.6□□□□□ -1.51
USP47-208ENST00000529813 PAG1Q9NWQ8 432 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 PALD1Q9ULE6 856 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 SUGT1Q9Y2Z0 365 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 LTBP1Q14766 1721 aa5.6□□□□□ -1.51
USP47-208ENST00000529813 DICER1Q9UPY3 1922 aaKnown RBP5.59□□□□□ -1.51
USP47-208ENST00000529813 MYCP01106 439 aaPredicted RBP5.59□□□□□ -1.51
USP47-208ENST00000529813 CHGBP05060 677 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 MAP3K9P80192 1104 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 HDLBPQ00341 1268 aaKnown RBP5.59□□□□□ -1.51
USP47-208ENST00000529813 ATP2B2Q01814 1243 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 COL13A1Q5TAT6 717 aaPredicted RBP5.59□□□□□ -1.51
USP47-208ENST00000529813 ANKRD13AQ8IZ07 590 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 TNS4Q8IZW8 715 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 FSD1Q9BTV5 496 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.59□□□□□ -1.51
USP47-208ENST00000529813 PICK1Q9NRD5 415 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 RNF216Q9NWF9 866 aaPredicted RBP5.59□□□□□ -1.51
USP47-208ENST00000529813 ZNF609O15014 1411 aa5.59□□□□□ -1.51
USP47-208ENST00000529813 COL1A1P02452 1464 aaPredicted RBP5.59□□□□□ -1.51
USP47-208ENST00000529813 MAGEB6P1A0A0J9YX57 407 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms