RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 CT47A1Q5JQC4 288 aaPredicted RBP3.36□□□□□ -1.87
FDFT1-216ENST00000529521 L1TD1Q5T7N2 865 aaKnown RBP3.36□□□□□ -1.87
FDFT1-216ENST00000529521 EP400NLQ6ZTU2 488 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 KRT77Q7Z794 578 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 CATIPQ7Z7H3 387 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 SLC51AQ86UW1 340 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 TTC30AQ86WT1 665 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 LMNTD2Q8IXW0 634 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 NUDT8Q8WV74 236 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 C7orf43Q8WVR3 580 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 RUNDC1Q96C34 613 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 SLC4A9Q96Q91 983 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 KRTAP4-5Q9BYR2 181 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 TANGO6Q9C0B7 1094 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 ALDH8A1Q9H2A2 487 aaPredicted RBP3.36□□□□□ -1.87
FDFT1-216ENST00000529521 ZHX3Q9H4I2 956 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 IFT57Q9NWB7 429 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 CGNQ9P2M7 1197 aaKnown RBP3.36□□□□□ -1.87
FDFT1-216ENST00000529521 SUN2Q9UH99 717 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 SERTAD1Q9UHV2 236 aa3.36□□□□□ -1.87
FDFT1-216ENST00000529521 CFAP65Q6ZU64 1925 aaKnown RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 USP17L3A6NCW0 530 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 USP17L4A6NCW7 530 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 RECKO95980 971 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 LDHAP00338 332 aaKnown RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 S100BP04271 92 aaPredicted RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 HSP90AB1P08238 724 aaKnown RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 VIL1P09327 827 aaKnown RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 CCDC172P0C7W6 258 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 U2AF1L5P0DN76 240 aaPredicted RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 SKILP12757 684 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 RASA1P20936 1047 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 CLK1P49759 484 aaKnown RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 U2AF1Q01081 240 aaKnown RBP eCLIP3.35□□□□□ -1.875e-31■□□□□ 8.6
FDFT1-216ENST00000529521 KIAA2012Q0VF49 1180 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 COL19A1Q14993 1142 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 E2F5Q15329 346 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 IQCEQ6IPM2 695 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 LARP1Q6PKG0 1096 aaKnown RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 USP17L2Q6R6M4 530 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 CCDC73Q6ZRK6 1079 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 USP17L1Q7RTZ2 530 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 UBE2Q1Q7Z7E8 422 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 SKAP1Q86WV1 359 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 PLEKHM2Q8IWE5 1019 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 ZDHHC1Q8WTX9 485 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 GOLGA1Q92805 767 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 CHMP4CQ96CF2 233 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 DDX56Q9NY93 547 aaKnown RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 UTP6Q9NYH9 597 aaKnown RBP3.35□□□□□ -1.87
FDFT1-216ENST00000529521 CHIC2Q9UKJ5 165 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 ACAD8Q9UKU7 415 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 NOD1Q9Y239 953 aa3.35□□□□□ -1.87
FDFT1-216ENST00000529521 TMEM238LA0A1B0GVL6 79 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 PABPN1LA6NDY0 278 aaKnown RBP3.34□□□□□ -1.87
FDFT1-216ENST00000529521 ERICH4A6NGS2 130 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 TMEM88BA6NKF7 163 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 TRIM64CA6NLI5 447 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 EML1O00423 815 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 KIF5CO60282 957 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 IPO7O95373 1038 aaKnown RBP3.34□□□□□ -1.87
FDFT1-216ENST00000529521 ZNF853P0CG23 659 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 RBP3P10745 1247 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 RRM1P23921 792 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 USP5P45974 858 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 ATP1A2P50993 1020 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 WASHC5Q12768 1159 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 SAFB2Q14151 953 aaKnown RBP eCLIP3.34□□□□□ -1.87
FDFT1-216ENST00000529521 ZNF394Q53GI3 561 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 KANK4Q5T7N3 995 aaPredicted RBP3.34□□□□□ -1.87
FDFT1-216ENST00000529521 RNF187Q5TA31 235 aaPredicted RBP3.34□□□□□ -1.87
FDFT1-216ENST00000529521 DUSP27Q5VZP5 1158 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 MSL1Q68DK7 614 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 FILIP1Q7Z7B0 1213 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 FBXO11Q86XK2 927 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 TRIM50Q86XT4 487 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 RELL1Q8IUW5 271 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 IQCF2Q8IXL9 164 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 CHPFQ8IZ52 775 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 SAMD3Q8N6K7 520 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 CCDC89Q8N998 374 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 FRS2Q8WU20 508 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 JDP2Q8WYK2 163 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 POLR3CQ9BUI4 534 aaPredicted RBP3.34□□□□□ -1.87
FDFT1-216ENST00000529521 GTPBP4Q9BZE4 634 aaKnown RBP3.34□□□□□ -1.87
FDFT1-216ENST00000529521 TSPYL1Q9H0U9 437 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 EFCC1Q9HA90 598 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 SLC6A14Q9UN76 642 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 ZNF652Q9Y2D9 606 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 SLC45A1Q9Y2W3 748 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 IL16Q14005 1332 aa3.34□□□□□ -1.87
FDFT1-216ENST00000529521 EIF4G1Q04637 1599 aaKnown RBP3.34□□□□□ -1.88
FDFT1-216ENST00000529521 DYTNA2CJ06 578 aa3.33□□□□□ -1.88
FDFT1-216ENST00000529521 IFRD1O00458 451 aaPredicted RBP3.33□□□□□ -1.88
FDFT1-216ENST00000529521 TPPPO94811 219 aa3.33□□□□□ -1.88
FDFT1-216ENST00000529521 TGFB1P01137 390 aa3.33□□□□□ -1.88
FDFT1-216ENST00000529521 ZNF132P52740 706 aa3.33□□□□□ -1.88
FDFT1-216ENST00000529521 KCNQ4P56696 695 aa3.33□□□□□ -1.88
FDFT1-216ENST00000529521 TAGLNQ01995 201 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms