RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 LLGL2Q6P1M3 1020 aa9.7□□□□□ -0.86
PCF11-202ENST00000528336 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
PCF11-202ENST00000528336 CYP4F12Q9HCS2 524 aa9.7□□□□□ -0.86
PCF11-202ENST00000528336 MSTNO14793 375 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 ZNF862O60290 1169 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 AOC2O75106 756 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 LMNB1P20700 586 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 LIG3P49916 1009 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 ZNF252P-AS1Q0IIN9 211 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 SPOCK3Q9BQ16 436 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 CEP41Q9BYV8 373 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 CYP8B1Q9UNU6 501 aa9.69□□□□□ -0.86
PCF11-202ENST00000528336 RECKO95980 971 aa9.68□□□□□ -0.86
PCF11-202ENST00000528336 VAMP1P23763 118 aa9.68□□□□□ -0.86
PCF11-202ENST00000528336 DOC2BQ14184 412 aa9.68□□□□□ -0.86
PCF11-202ENST00000528336 ANKRD34AQ69YU3 496 aa9.68□□□□□ -0.86
PCF11-202ENST00000528336 SMG8Q8ND04 991 aaKnown RBP9.68□□□□□ -0.86
PCF11-202ENST00000528336 GPBAR1Q8TDU6 330 aa9.68□□□□□ -0.86
PCF11-202ENST00000528336 RLBP1P12271 317 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 Q6ZS46 218 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 RELL1Q8IUW5 271 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 TP53INP1Q96A56 240 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 WDR18Q9BV38 432 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 KRT82Q9NSB4 513 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 GGT7Q9UJ14 662 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 TLR6Q9Y2C9 796 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 PCDHB5Q9Y5E4 795 aa9.67□□□□□ -0.86
PCF11-202ENST00000528336 SLFN14P0C7P3 912 aa9.66□□□□□ -0.86
PCF11-202ENST00000528336 GBP2P32456 591 aaPredicted RBP9.66□□□□□ -0.86
PCF11-202ENST00000528336 ZNF76P36508 570 aa9.66□□□□□ -0.86
PCF11-202ENST00000528336 PREPP48147 710 aa9.66□□□□□ -0.86
PCF11-202ENST00000528336 SOX4Q06945 474 aaPredicted RBP9.66□□□□□ -0.86
PCF11-202ENST00000528336 AGMOQ6ZNB7 445 aa9.66□□□□□ -0.86
PCF11-202ENST00000528336 DZIP1LQ8IYY4 767 aaKnown RBP9.66□□□□□ -0.86
PCF11-202ENST00000528336 SUGCTQ9HAC7 445 aa9.66□□□□□ -0.86
PCF11-202ENST00000528336 COPRSQ9NQ92 184 aa9.66□□□□□ -0.86
PCF11-202ENST00000528336 TPSG1Q9NRR2 321 aa9.66□□□□□ -0.86
PCF11-202ENST00000528336 MINDY4BA8MYZ0 360 aa9.65□□□□□ -0.86
PCF11-202ENST00000528336 PROCP04070 461 aa9.65□□□□□ -0.86
PCF11-202ENST00000528336 PTPN11Q06124 597 aaPredicted RBP9.65□□□□□ -0.86
PCF11-202ENST00000528336 DYMQ7RTS9 669 aa9.65□□□□□ -0.86
PCF11-202ENST00000528336 SSBP4Q9BWG4 385 aaPredicted RBP9.65□□□□□ -0.86
PCF11-202ENST00000528336 PPP1R9AQ9ULJ8 1098 aa9.65□□□□□ -0.86
PCF11-202ENST00000528336 AP4E1Q9UPM8 1137 aa9.65□□□□□ -0.86
PCF11-202ENST00000528336 GAS2O43903 313 aaKnown RBP9.64□□□□□ -0.87
PCF11-202ENST00000528336 TRIM37O94972 964 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 TIAF1O95411 115 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 ADH5P11766 374 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 TFE3P19532 575 aaPredicted RBP9.64□□□□□ -0.87
PCF11-202ENST00000528336 RPS26P62854 115 aaKnown RBP9.64□□□□□ -0.87
PCF11-202ENST00000528336 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
PCF11-202ENST00000528336 SEPT6Q14141 434 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 KIF4BQ2VIQ3 1234 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 HS2ST1Q7LGA3 356 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 PHC3Q8NDX5 983 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 JARID2Q92833 1246 aaPredicted RBP9.64□□□□□ -0.87
PCF11-202ENST00000528336 UTP4Q969X6 686 aaKnown RBP9.64□□□□□ -0.87
PCF11-202ENST00000528336 FAM46AQ96IP4 442 aaKnown RBP9.64□□□□□ -0.87
PCF11-202ENST00000528336 RSRP1Q9BUV0 290 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 KBTBD4Q9NVX7 518 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 PCDHA4Q9UN74 947 aa9.64□□□□□ -0.87
PCF11-202ENST00000528336 SCAMP3O14828 347 aaKnown RBP9.63□□□□□ -0.87
PCF11-202ENST00000528336 USP11P51784 963 aa9.63□□□□□ -0.87
PCF11-202ENST00000528336 C2CD4AQ8NCU7 369 aaPredicted RBP9.63□□□□□ -0.87
PCF11-202ENST00000528336 TMEM74Q96NL1 305 aa9.63□□□□□ -0.87
PCF11-202ENST00000528336 CSADQ9Y600 493 aa9.63□□□□□ -0.87
PCF11-202ENST00000528336 FANCCQ00597 558 aa9.62□□□□□ -0.87
PCF11-202ENST00000528336 C9orf131Q5VYM1 1079 aa9.62□□□□□ -0.87
PCF11-202ENST00000528336 ERMP1Q7Z2K6 904 aa9.62□□□□□ -0.87
PCF11-202ENST00000528336 RNF34Q969K3 372 aa9.62□□□□□ -0.87
PCF11-202ENST00000528336 MIR1-1HGQ9H1L0 117 aa9.62□□□□□ -0.87
PCF11-202ENST00000528336 E9PSI1 815 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 IGHA1P01876 353 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 PF4P02776 101 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 BMP3P12645 472 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 ID3Q02535 119 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 PWP1Q13610 501 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 ARMC10Q8N2F6 343 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 CACNA2D2Q9NY47 1150 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 ACTL7BQ9Y614 415 aa9.61□□□□□ -0.87
PCF11-202ENST00000528336 DCDC2CA8MYV0 355 aa9.6□□□□□ -0.87
PCF11-202ENST00000528336 TMPRSS2O15393 492 aa9.6□□□□□ -0.87
PCF11-202ENST00000528336 ASPAP45381 313 aa9.6□□□□□ -0.87
PCF11-202ENST00000528336 CAMK2GQ13555 558 aaPredicted RBP9.6□□□□□ -0.87
PCF11-202ENST00000528336 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.6□□□□□ -0.87
PCF11-202ENST00000528336 MYRFLQ96LU7 910 aa9.6□□□□□ -0.87
PCF11-202ENST00000528336 KCNF1Q9H3M0 494 aa9.6□□□□□ -0.87
PCF11-202ENST00000528336 METTL5Q9NRN9 209 aaKnown RBP9.6□□□□□ -0.87
PCF11-202ENST00000528336 CRIM1Q9NZV1 1036 aa9.6□□□□□ -0.87
PCF11-202ENST00000528336 PCDHGC5Q9Y5F6 944 aa9.6□□□□□ -0.87
PCF11-202ENST00000528336 DHX15O43143 795 aaKnown RBP9.59□□□□□ -0.87
PCF11-202ENST00000528336 RXRBP28702 533 aa9.59□□□□□ -0.87
PCF11-202ENST00000528336 UVSSAQ2YD98 709 aa9.59□□□□□ -0.87
PCF11-202ENST00000528336 SGO2Q562F6 1265 aa9.59□□□□□ -0.87
PCF11-202ENST00000528336 ZC3H12AQ5D1E8 599 aaKnown RBP9.59□□□□□ -0.87
PCF11-202ENST00000528336 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
PCF11-202ENST00000528336 CDPF1Q6NVV7 123 aa9.59□□□□□ -0.87
PCF11-202ENST00000528336 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms