RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 ZFYVE27Q5T4F4 411 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 CREB3L3Q68CJ9 461 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 CNNM3Q8NE01 707 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 FMNL2Q96PY5 1086 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 BIN2Q9UBW5 565 aaPredicted RBP8.54□□□□□ -1.04
SOX6-208ENST00000527619 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 CTDP1Q9Y5B0 961 aaPredicted RBP8.54□□□□□ -1.04
SOX6-208ENST00000527619 ATP7BP35670 1465 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 XRN1Q8IZH2 1706 aaKnown RBP8.54□□□□□ -1.04
SOX6-208ENST00000527619 H3BQV1 296 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 N4BP1O75113 896 aaKnown RBP8.54□□□□□ -1.04
SOX6-208ENST00000527619 ERLIN2O94905 339 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 SKIV2LQ15477 1246 aaKnown RBP8.54□□□□□ -1.04
SOX6-208ENST00000527619 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 ERC1Q8IUD2 1116 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 GIMAP7Q8NHV1 300 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 WDR24Q96S15 920 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 BICC1Q9H694 974 aaKnown RBP8.54□□□□□ -1.04
SOX6-208ENST00000527619 BLOC1S6Q9UL45 172 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 PPP2R2CQ9Y2T4 447 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.54□□□□□ -1.04
SOX6-208ENST00000527619 N4BP2Q86UW6 1770 aaPredicted RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 CDKL5O76039 1030 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 CSB-PGBD3P0DP91 1061 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 RPS6KA3P51812 740 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 MNAT1P51948 309 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 CEBPZQ03701 1054 aaKnown RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 PDE4DQ08499 809 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 RBBP5Q15291 538 aaKnown RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 TBC1D25Q3MII6 688 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 MYLK4Q86YV6 388 aaPredicted RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 RHPN1Q8TCX5 695 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 BRF1Q92994 677 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 KIFC2Q96AC6 838 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 MMTAG2Q9BU76 263 aaKnown RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 RAB21Q9UL25 225 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 RBM8AQ9Y5S9 174 aaKnown RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 IVNS1ABPQ9Y6Y0 642 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 ARHGAP6O43182 974 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 RPS6KB1P23443 525 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 HSPA2P54652 639 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 FANCCQ00597 558 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 TBC1D8BQ0IIM8 1120 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 CCDC15Q0P6D6 951 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 FLIIQ13045 1269 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 BLOC1S2Q6QNY1 142 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 OGFOD1Q8N543 542 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 FSIP1Q8NA03 581 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 SSH3Q8TE77 659 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 DHX58Q96C10 678 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 ACBD3Q9H3P7 528 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 ANKZF1Q9H8Y5 726 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 SPATS2LQ9NUQ6 558 aaKnown RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 L1RE1Q9UN81 338 aa8.53□□□□□ -1.04
SOX6-208ENST00000527619 USP42Q9H9J4 1324 aaKnown RBP8.53□□□□□ -1.04
SOX6-208ENST00000527619 IPO5O00410 1097 aaKnown RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 CBFA2T2O43439 604 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 ADD1P35611 737 aaKnown RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 CHMP4BP1P59074 171 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 STK3Q13188 491 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 TOB2Q14106 344 aaPredicted RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 DPCR1Q3MIW9 517 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 SRGAP1Q7Z6B7 1085 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 NCAPG2Q86XI2 1143 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 MSANTD4Q8NCY6 345 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 CCDC102AQ96A19 550 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 CRACR2AQ9BSW2 395 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 PLEKHA4Q9H4M7 779 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 MINK1Q8N4C8 1332 aaPredicted RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 MAP3K5Q99683 1374 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 SLC27A2O14975 620 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 JAK2O60674 1132 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 SURF6O75683 361 aaKnown RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 GLRX3O76003 335 aaKnown RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 HNRNPH1P31943 449 aaKnown RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 MCM10Q7L590 875 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 FNBP4Q8N3X1 1017 aaPredicted RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 PHC3Q8NDX5 983 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 KAT2BQ92831 832 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 DDX11Q96FC9 970 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 SLX1AQ9BQ83 275 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 IQCGQ9H095 443 aaKnown RBP8.52□□□□□ -1.05
SOX6-208ENST00000527619 GBP3Q9H0R5 595 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 FAM204AQ9H8W3 233 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 CABP1Q9NZU7 370 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 KIAA1468Q9P260 1216 aa8.52□□□□□ -1.05
SOX6-208ENST00000527619 IMPDH2P12268 514 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 TUBB4BP68371 445 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 IDI1Q13907 227 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 NCAPHQ15003 741 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 SLC5A9Q2M3M2 681 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 ATL3Q6DD88 541 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 TEX11Q8IYF3 940 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 CEP112Q8N8E3 955 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 DRAXINQ8NBI3 349 aaPredicted RBP8.51□□□□□ -1.05
SOX6-208ENST00000527619 SDF4Q9BRK5 362 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 ABCB6Q9NP58 842 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms