RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 TRIM73Q86UV7 250 aa6.71□□□□□ -1.34
CD44-225ENST00000527326 PLA2G4DQ86XP0 818 aa6.71□□□□□ -1.34
CD44-225ENST00000527326 FBXO41Q8TF61 875 aa6.71□□□□□ -1.34
CD44-225ENST00000527326 INTS4Q96HW7 963 aaKnown RBP6.71□□□□□ -1.34
CD44-225ENST00000527326 TMX3Q96JJ7 454 aa6.71□□□□□ -1.34
CD44-225ENST00000527326 AGBL1Q96MI9 1066 aa6.71□□□□□ -1.34
CD44-225ENST00000527326 CRACR2AQ9BSW2 395 aa6.71□□□□□ -1.34
CD44-225ENST00000527326 MMTAG2Q9BU76 263 aaKnown RBP6.71□□□□□ -1.34
CD44-225ENST00000527326 ARFGAP3Q9NP61 516 aa6.71□□□□□ -1.34
CD44-225ENST00000527326 MYO6Q9UM54 1294 aa6.71□□□□□ -1.34
CD44-225ENST00000527326 WDR33Q9C0J8 1336 aaKnown RBP6.71□□□□□ -1.34
CD44-225ENST00000527326 KDRP35968 1356 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 AK9Q5TCS8 1911 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 ASXL2Q76L83 1435 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 SPINT1O43278 529 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 AP5Z1O43299 807 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 PECAM1P16284 738 aaPredicted RBP6.7□□□□□ -1.34
CD44-225ENST00000527326 RELBQ01201 579 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 CDC37Q16543 378 aaPredicted RBP6.7□□□□□ -1.34
CD44-225ENST00000527326 CCDC27Q2M243 656 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 AMOTQ4VCS5 1084 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 KCNV1Q6PIU1 500 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 CPLX2Q6PUV4 134 aaKnown RBP6.7□□□□□ -1.34
CD44-225ENST00000527326 TBC1D9Q6ZT07 1266 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 DZIP3Q86Y13 1208 aaKnown RBP6.7□□□□□ -1.34
CD44-225ENST00000527326 CCAR2Q8N163 923 aaKnown RBP6.7□□□□□ -1.34
CD44-225ENST00000527326 GPR161Q8N6U8 529 aaKnown RBP6.7□□□□□ -1.34
CD44-225ENST00000527326 PRPF38AQ8NAV1 312 aaKnown RBP6.7□□□□□ -1.34
CD44-225ENST00000527326 RETREG2Q8NC44 543 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 MICAL1Q8TDZ2 1067 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 BATF3Q9NR55 127 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 ODF2LQ9ULJ1 636 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 DDX19BQ9UMR2 479 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 NUB1Q9Y5A7 615 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 TTC41PQ6P2S7 1318 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 PHLPP2Q6ZVD8 1323 aa6.7□□□□□ -1.34
CD44-225ENST00000527326 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 POM121CA8CG34 1229 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 EPB41L2O43491 1005 aaKnown RBP6.69□□□□□ -1.34
CD44-225ENST00000527326 TADA3O75528 432 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 GCKP35557 465 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 CCNHP51946 323 aaPredicted RBP6.69□□□□□ -1.34
CD44-225ENST00000527326 PTSQ03393 145 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 LRMPQ12912 555 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 PSMD2Q13200 908 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 SNW1Q13573 536 aaKnown RBP6.69□□□□□ -1.34
CD44-225ENST00000527326 PDIA5Q14554 519 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 BRD3Q15059 726 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 ZKSCAN2Q63HK3 967 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 LRRC31Q6UY01 552 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 USP48Q86UV5 1035 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 CHD1LQ86WJ1 897 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 IQCA1Q86XH1 822 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 SPATS2Q86XZ4 545 aaKnown RBP6.69□□□□□ -1.34
CD44-225ENST00000527326 CCDC50Q8IVM0 306 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 LRRC8AQ8IWT6 810 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 AMOTL1Q8IY63 956 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 CEP112Q8N8E3 955 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 TDRD7Q8NHU6 1098 aaKnown RBP6.69□□□□□ -1.34
CD44-225ENST00000527326 FAM71BQ8TC56 605 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 KAT2BQ92831 832 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 KCNB2Q92953 911 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 JPH2Q9BR39 696 aaPredicted RBP6.69□□□□□ -1.34
CD44-225ENST00000527326 USP26Q9BXU7 913 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 TMPRSS4Q9NRS4 437 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 RRP7BPQ9NSQ0 103 aa6.69□□□□□ -1.34
CD44-225ENST00000527326 RPAP1Q9BWH6 1393 aaPredicted RBP6.69□□□□□ -1.34
CD44-225ENST00000527326 ZCCHC11Q5TAX3 1644 aaKnown RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 MAP2K7O14733 419 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 ERC2O15083 957 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 SASH3O75995 380 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 PPP2R1AP30153 589 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 INPP5BP32019 993 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 ABL2P42684 1182 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 GSDMDP57764 484 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 TUBB4BP68371 445 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 CUL4AQ13619 759 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 LRRFIP1Q32MZ4 808 aaKnown RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 TBC1D25Q3MII6 688 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 HDGFL1Q5TGJ6 251 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 SARM1Q6SZW1 724 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 NFXL1Q6ZNB6 911 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 NCAPG2Q86XI2 1143 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 DZIP1LQ8IYY4 767 aaKnown RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 ZGPATQ8N5A5 531 aaKnown RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 MAGEC3Q8TD91 643 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 CACTINQ8WUQ7 758 aaKnown RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 HNRNPLLQ8WVV9 542 aaKnown RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 PIK3R5Q8WYR1 880 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 ZKSCAN4Q969J2 545 aaPredicted RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 GCC1Q96CN9 775 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 INSM2Q96T92 566 aaPredicted RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 STK31Q9BXU1 1019 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 FUT8Q9BYC5 575 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 TRIM5Q9C035 493 aa6.68□□□□□ -1.34
CD44-225ENST00000527326 RANBP17Q9H2T7 1088 aaKnown RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 ZNF395Q9H8N7 513 aaPredicted RBP6.68□□□□□ -1.34
CD44-225ENST00000527326 ZCCHC17Q9NP64 241 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms