RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 LRRN4CLQ8ND94 238 aa5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 BHLHE22Q8NFJ8 381 aaPredicted RBP5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 CCER1Q8TC90 406 aaPredicted RBP5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 SLC38A3Q99624 504 aa5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 TRIM56Q9BRZ2 755 aaKnown RBP5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 ZFYVE28Q9HCC9 887 aa5.76□□□□□ -1.49
CLNS1A-209ENST00000527299 CENPBP07199 599 aaPredicted RBP5.75□□□□□ -1.49
CLNS1A-209ENST00000527299 PRKCQQ04759 706 aa5.75□□□□□ -1.49
CLNS1A-209ENST00000527299 FAM84AQ96KN4 292 aa5.75□□□□□ -1.49
CLNS1A-209ENST00000527299 CORO1BQ9BR76 489 aa5.75□□□□□ -1.49
CLNS1A-209ENST00000527299 LGR6Q9HBX8 967 aa5.75□□□□□ -1.49
CLNS1A-209ENST00000527299 AOC2O75106 756 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 NPR3P17342 541 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 USP5P45974 858 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 GRIA4P48058 902 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 SPRED3Q2MJR0 410 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 FAM181AQ8N9Y4 354 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 PI4K2BQ8TCG2 481 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 TCF12Q99081 682 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 WDR18Q9BV38 432 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 PPP1R9AQ9ULJ8 1098 aa5.74□□□□□ -1.49
CLNS1A-209ENST00000527299 B3GALT4O96024 378 aa5.73□□□□□ -1.49
CLNS1A-209ENST00000527299 FAM87AP0C7U9 286 aa5.73□□□□□ -1.49
CLNS1A-209ENST00000527299 CD96P40200 585 aa5.73□□□□□ -1.49
CLNS1A-209ENST00000527299 GTF3C2Q8WUA4 911 aaPredicted RBP5.73□□□□□ -1.49
CLNS1A-209ENST00000527299 MKNK2Q9HBH9 465 aa5.73□□□□□ -1.49
CLNS1A-209ENST00000527299 U3KQE9 123 aa5.73□□□□□ -1.49
CLNS1A-209ENST00000527299 A0A1W2PP55 124 aa5.72□□□□□ -1.49
CLNS1A-209ENST00000527299 POLR3DP05423 398 aaPredicted RBP5.72□□□□□ -1.49
CLNS1A-209ENST00000527299 IFI16Q16666 785 aaKnown RBP5.72□□□□□ -1.49
CLNS1A-209ENST00000527299 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
CLNS1A-209ENST00000527299 DDX54Q8TDD1 881 aaKnown RBP5.72□□□□□ -1.49
CLNS1A-209ENST00000527299 LIN7BQ9HAP6 207 aa5.72□□□□□ -1.49
CLNS1A-209ENST00000527299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.72□□□□□ -1.49
CLNS1A-209ENST00000527299 TMPRSS2O15393 492 aa5.71□□□□□ -1.5
CLNS1A-209ENST00000527299 FZD6O60353 706 aa5.71□□□□□ -1.5
CLNS1A-209ENST00000527299 CDK5R2Q13319 367 aa5.71□□□□□ -1.5
CLNS1A-209ENST00000527299 AOC3Q16853 763 aa5.71□□□□□ -1.5
CLNS1A-209ENST00000527299 GALNT12Q8IXK2 581 aa5.71□□□□□ -1.5
CLNS1A-209ENST00000527299 GJD3Q8N144 294 aa5.71□□□□□ -1.5
CLNS1A-209ENST00000527299 FLAD1Q8NFF5 587 aa5.71□□□□□ -1.5
CLNS1A-209ENST00000527299 FAM53CQ9NYF3 392 aa5.71□□□□□ -1.5
CLNS1A-209ENST00000527299 LRRC10BA6NIK2 292 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 ZNF865P0CJ78 1059 aaPredicted RBP5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 CFPP27918 469 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 OXCT1P55809 520 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 MTMR3Q13615 1198 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 AAMPQ13685 434 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 PDE3AQ14432 1141 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 SLC23A3Q6PIS1 610 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 PBXIP1Q96AQ6 731 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 HRASLS5Q96KN8 279 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 ZNF576Q9H609 170 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 CRIM1Q9NZV1 1036 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 PLAGL2Q9UPG8 496 aa5.7□□□□□ -1.5
CLNS1A-209ENST00000527299 ZNF503-AS2A6NEH8 195 aa5.69□□□□□ -1.5
CLNS1A-209ENST00000527299 EIF5BO60841 1220 aaKnown RBP5.69□□□□□ -1.5
CLNS1A-209ENST00000527299 ZSWIM9Q86XI8 627 aa5.69□□□□□ -1.5
CLNS1A-209ENST00000527299 C1QL4Q86Z23 238 aa5.69□□□□□ -1.5
CLNS1A-209ENST00000527299 TOX2Q96NM4 488 aa5.69□□□□□ -1.5
CLNS1A-209ENST00000527299 FANCD2OSQ96PS1 177 aa5.69□□□□□ -1.5
CLNS1A-209ENST00000527299 TMEM265A0A087WTH1 108 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 LEFTY1O75610 366 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 FAM13AO94988 1023 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 CEACAM5P06731 702 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 LIG1P18858 919 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 ITPKAP23677 461 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 RAP1GAPP47736 663 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 AP3B2Q13367 1082 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 ANGEL2Q5VTE6 544 aaKnown RBP5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 KIAA0319Q5VV43 1072 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 SMYD4Q8IYR2 804 aaPredicted RBP5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 WDR89Q96FK6 387 aaPredicted RBP5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 ATXN3LQ9H3M9 355 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 PIDD1Q9HB75 910 aa5.68□□□□□ -1.5
CLNS1A-209ENST00000527299 TSPAN15O95858 294 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 MLANAQ16655 118 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 LILRA6Q6PI73 481 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 LCNL1Q6ZST4 164 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 SIAH1Q8IUQ4 282 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 DUSP23Q9BVJ7 150 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 TNKS2Q9H2K2 1166 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 DISC1Q9NRI5 854 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 CCDC87Q9NVE4 849 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 PCDHGC5Q9Y5F6 944 aa5.67□□□□□ -1.5
CLNS1A-209ENST00000527299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 SSFA2P28290 1259 aa5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 ID3Q02535 119 aa5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 PTPN12Q05209 780 aaKnown RBP5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 KCNMB1Q16558 191 aa5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 ZSCAN18Q8TBC5 510 aaPredicted RBP5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 PPP1R16BQ96T49 567 aa5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 CCDC86Q9H6F5 360 aaKnown RBP5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 PRDM7Q9NQW5 492 aa5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 SNX11Q9Y5W9 270 aa5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 NCANO14594 1321 aa5.66□□□□□ -1.5
CLNS1A-209ENST00000527299 ZNF862O60290 1169 aa5.65□□□□□ -1.5
CLNS1A-209ENST00000527299 SLFN14P0C7P3 912 aa5.65□□□□□ -1.5
CLNS1A-209ENST00000527299 KIF4BQ2VIQ3 1234 aa5.65□□□□□ -1.5
CLNS1A-209ENST00000527299 ARHGAP27Q6ZUM4 889 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms