RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 PDE3AQ14432 1141 aa23.62■■□□□ 1.37
PKP3-204ENST00000526971 DDX19BQ9UMR2 479 aa23.62■■□□□ 1.37
PKP3-204ENST00000526971 BCAMP50895 628 aa23.61■■□□□ 1.37
PKP3-204ENST00000526971 ATP2B3Q16720 1220 aa23.61■■□□□ 1.37
PKP3-204ENST00000526971 SSH3Q8TE77 659 aa23.61■■□□□ 1.37
PKP3-204ENST00000526971 ERO1AQ96HE7 468 aa23.61■■□□□ 1.37
PKP3-204ENST00000526971 PCDH10Q9P2E7 1040 aa23.61■■□□□ 1.37
PKP3-204ENST00000526971 PTPN22Q9Y2R2 807 aa23.61■■□□□ 1.37
PKP3-204ENST00000526971 VGLL4Q14135 290 aa23.6■■□□□ 1.37
PKP3-204ENST00000526971 C20orf194Q5TEA3 1177 aa23.6■■□□□ 1.37
PKP3-204ENST00000526971 BRI3BPQ8WY22 251 aa23.6■■□□□ 1.37
PKP3-204ENST00000526971 CACNB3P54284 484 aa23.59■■□□□ 1.37
PKP3-204ENST00000526971 CHAF1AQ13111 956 aaPredicted RBP23.59■■□□□ 1.37
PKP3-204ENST00000526971 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.37
PKP3-204ENST00000526971 OTUD7BQ6GQQ9 843 aa23.59■■□□□ 1.37
PKP3-204ENST00000526971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.59■■□□□ 1.37
PKP3-204ENST00000526971 TFCP2Q12800 502 aa23.58■■□□□ 1.37
PKP3-204ENST00000526971 CEP85Q6P2H3 762 aa23.58■■□□□ 1.37
PKP3-204ENST00000526971 ZBTB40Q9NUA8 1239 aa23.58■■□□□ 1.37
PKP3-204ENST00000526971 SP3Q02447 781 aa23.57■■□□□ 1.36
PKP3-204ENST00000526971 ARMC5Q96C12 935 aa23.57■■□□□ 1.36
PKP3-204ENST00000526971 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
PKP3-204ENST00000526971 EFCC1Q9HA90 598 aa23.57■■□□□ 1.36
PKP3-204ENST00000526971 AKAP2Q9Y2D5 859 aa23.57■■□□□ 1.36
PKP3-204ENST00000526971 FRAT2O75474 233 aaPredicted RBP23.56■■□□□ 1.36
PKP3-204ENST00000526971 FAM43AQ8N2R8 423 aa23.56■■□□□ 1.36
PKP3-204ENST00000526971 CCL15-CCL14A0A0B4J2E2 113 aa23.55■■□□□ 1.36
PKP3-204ENST00000526971 MAP3K9P80192 1104 aa23.55■■□□□ 1.36
PKP3-204ENST00000526971 CCL15Q16663 113 aa23.55■■□□□ 1.36
PKP3-204ENST00000526971 OTUD5Q96G74 571 aa23.55■■□□□ 1.36
PKP3-204ENST00000526971 SURF6O75683 361 aaKnown RBP23.54■■□□□ 1.36
PKP3-204ENST00000526971 TNNI2P48788 182 aa23.54■■□□□ 1.36
PKP3-204ENST00000526971 TIMM10P62072 90 aa23.54■■□□□ 1.36
PKP3-204ENST00000526971 NOP58Q9Y2X3 529 aaKnown RBP23.54■■□□□ 1.36
PKP3-204ENST00000526971 SNCAIPQ9Y6H5 919 aa23.54■■□□□ 1.36
PKP3-204ENST00000526971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.54■■□□□ 1.36
PKP3-204ENST00000526971 A0A1B0GUL7 405 aa23.53■■□□□ 1.36
PKP3-204ENST00000526971 ADORA1P30542 326 aa23.53■■□□□ 1.36
PKP3-204ENST00000526971 HDLBPQ00341 1268 aaKnown RBP23.53■■□□□ 1.36
PKP3-204ENST00000526971 TAF1CQ15572 869 aaPredicted RBP23.53■■□□□ 1.36
PKP3-204ENST00000526971 TEKT1Q969V4 418 aa23.53■■□□□ 1.36
PKP3-204ENST00000526971 GNL3LQ9NVN8 582 aaKnown RBP23.53■■□□□ 1.36
PKP3-204ENST00000526971 SPDYE5A6NIY4 337 aa23.52■■□□□ 1.36
PKP3-204ENST00000526971 EN2P19622 333 aaPredicted RBP23.52■■□□□ 1.36
PKP3-204ENST00000526971 GTF2A2P52657 109 aa23.52■■□□□ 1.36
PKP3-204ENST00000526971 OS9Q13438 667 aaPredicted RBP23.52■■□□□ 1.36
PKP3-204ENST00000526971 RPAP2Q8IXW5 612 aaPredicted RBP23.52■■□□□ 1.36
PKP3-204ENST00000526971 TBC1D22AQ8WUA7 517 aa23.52■■□□□ 1.36
PKP3-204ENST00000526971 CSADQ9Y600 493 aa23.52■■□□□ 1.36
PKP3-204ENST00000526971 AK9Q5TCS8 1911 aa23.51■■□□□ 1.35
PKP3-204ENST00000526971 APOBEC3HQ6NTF7 200 aaKnown RBP23.51■■□□□ 1.35
PKP3-204ENST00000526971 ZDHHC15Q96MV8 337 aa23.51■■□□□ 1.35
PKP3-204ENST00000526971 PTCH2Q9Y6C5 1203 aa23.51■■□□□ 1.35
PKP3-204ENST00000526971 ZBTB22O15209 634 aa23.5■■□□□ 1.35
PKP3-204ENST00000526971 PHKA1P46020 1223 aa23.5■■□□□ 1.35
PKP3-204ENST00000526971 RRP1P56182 461 aaKnown RBP23.5■■□□□ 1.35
PKP3-204ENST00000526971 CCDC102BQ68D86 513 aa23.5■■□□□ 1.35
PKP3-204ENST00000526971 XAGE2Q96GT9 111 aa23.5■■□□□ 1.35
PKP3-204ENST00000526971 ZNF333Q96JL9 665 aa23.5■■□□□ 1.35
PKP3-204ENST00000526971 NEUROD6Q96NK8 337 aa23.5■■□□□ 1.35
PKP3-204ENST00000526971 WRNIP1Q96S55 665 aa23.5■■□□□ 1.35
PKP3-204ENST00000526971 ZFYVE28Q9HCC9 887 aa23.5■■□□□ 1.35
PKP3-204ENST00000526971 SEMA3EO15041 775 aa23.49■■□□□ 1.35
PKP3-204ENST00000526971 WDR66Q8TBY9 1149 aa23.49■■□□□ 1.35
PKP3-204ENST00000526971 ZKSCAN4Q969J2 545 aaPredicted RBP23.49■■□□□ 1.35
PKP3-204ENST00000526971 GPR108Q9NPR9 543 aa23.49■■□□□ 1.35
PKP3-204ENST00000526971 RPAP1Q9BWH6 1393 aaPredicted RBP23.49■■□□□ 1.35
PKP3-204ENST00000526971 FAM83AQ86UY5 434 aa23.48■■□□□ 1.35
PKP3-204ENST00000526971 SIRT2Q8IXJ6 389 aa23.48■■□□□ 1.35
PKP3-204ENST00000526971 ARHGAP39Q9C0H5 1083 aa23.48■■□□□ 1.35
PKP3-204ENST00000526971 CEP290O15078 2479 aa23.48■■□□□ 1.35
PKP3-204ENST00000526971 BTBD19C9JJ37 291 aa23.47■■□□□ 1.35
PKP3-204ENST00000526971 IRF6O14896 467 aa23.47■■□□□ 1.35
PKP3-204ENST00000526971 HMMRO75330 724 aa23.47■■□□□ 1.35
PKP3-204ENST00000526971 ERO1BQ86YB8 467 aa23.47■■□□□ 1.35
PKP3-204ENST00000526971 MRIQ9BWK5 157 aa23.47■■□□□ 1.35
PKP3-204ENST00000526971 DENND2AQ9ULE3 1009 aa23.47■■□□□ 1.35
PKP3-204ENST00000526971 SUGT1Q9Y2Z0 365 aa23.47■■□□□ 1.35
PKP3-204ENST00000526971 TNNI3KQ59H18 835 aa23.46■■□□□ 1.35
PKP3-204ENST00000526971 FKBP1CQ5VVH2 108 aa23.46■■□□□ 1.35
PKP3-204ENST00000526971 TMOD2Q9NZR1 351 aa23.46■■□□□ 1.35
PKP3-204ENST00000526971 FPGT-TNNI3KV9GXZ4 949 aa23.46■■□□□ 1.35
PKP3-204ENST00000526971 MAST3O60307 1309 aa23.45■■□□□ 1.34
PKP3-204ENST00000526971 GORABQ5T7V8 394 aa23.45■■□□□ 1.34
PKP3-204ENST00000526971 HHIPL2Q6UWX4 724 aa23.45■■□□□ 1.34
PKP3-204ENST00000526971 EXOC6BQ9Y2D4 811 aa23.45■■□□□ 1.34
PKP3-204ENST00000526971 DOCK2Q92608 1830 aa23.45■■□□□ 1.34
PKP3-204ENST00000526971 TLR2O60603 784 aa23.44■■□□□ 1.34
PKP3-204ENST00000526971 CETPP11597 493 aa23.44■■□□□ 1.34
PKP3-204ENST00000526971 INPP5BP32019 993 aa23.44■■□□□ 1.34
PKP3-204ENST00000526971 PPIL2Q13356 520 aa23.44■■□□□ 1.34
PKP3-204ENST00000526971 SLC9C1Q4G0N8 1177 aa23.44■■□□□ 1.34
PKP3-204ENST00000526971 HSP90AB4PQ58FF6 505 aa23.44■■□□□ 1.34
PKP3-204ENST00000526971 HABP4Q5JVS0 413 aaKnown RBP23.44■■□□□ 1.34
PKP3-204ENST00000526971 MIGA2Q7L4E1 593 aa23.44■■□□□ 1.34
PKP3-204ENST00000526971 ERC1Q8IUD2 1116 aa23.44■■□□□ 1.34
PKP3-204ENST00000526971 MYH2Q9UKX2 1941 aa23.43■■□□□ 1.34
PKP3-204ENST00000526971 SALL1Q9NSC2 1324 aa23.43■■□□□ 1.34
PKP3-204ENST00000526971 RASGRF1Q13972 1273 aa23.43■■□□□ 1.34
PKP3-204ENST00000526971 GCC1Q96CN9 775 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms