RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 HAND2P61296 217 aa24.3■■□□□ 1.48
SMCO4-203ENST00000526869 GTF2IP78347 998 aa24.3■■□□□ 1.48
SMCO4-203ENST00000526869 KIAA2012Q0VF49 1180 aa24.3■■□□□ 1.48
SMCO4-203ENST00000526869 NCOA7Q8NI08 942 aa24.3■■□□□ 1.48
SMCO4-203ENST00000526869 NOL10Q9BSC4 688 aaKnown RBP24.3■■□□□ 1.48
SMCO4-203ENST00000526869 AGXT2Q9BYV1 514 aa24.3■■□□□ 1.48
SMCO4-203ENST00000526869 NBPF3Q9H094 633 aa24.3■■□□□ 1.48
SMCO4-203ENST00000526869 ATP8A2Q9NTI2 1148 aa24.3■■□□□ 1.48
SMCO4-203ENST00000526869 BAG3O95817 575 aa24.29■■□□□ 1.48
SMCO4-203ENST00000526869 TOB2Q14106 344 aaPredicted RBP24.29■■□□□ 1.48
SMCO4-203ENST00000526869 VPS33BQ9H267 617 aa24.29■■□□□ 1.48
SMCO4-203ENST00000526869 ANAPC4Q9UJX5 808 aa24.29■■□□□ 1.48
SMCO4-203ENST00000526869 CD2APQ9Y5K6 639 aa24.29■■□□□ 1.48
SMCO4-203ENST00000526869 GAKO14976 1311 aa24.29■■□□□ 1.48
SMCO4-203ENST00000526869 BRCA1P38398 1863 aaKnown RBP24.28■■□□□ 1.48
SMCO4-203ENST00000526869 MYH2Q9UKX2 1941 aa24.28■■□□□ 1.48
SMCO4-203ENST00000526869 C21orf2O43822 256 aa24.28■■□□□ 1.48
SMCO4-203ENST00000526869 TRDNQ13061 729 aa24.28■■□□□ 1.48
SMCO4-203ENST00000526869 COL9A3Q14050 684 aaPredicted RBP24.28■■□□□ 1.48
SMCO4-203ENST00000526869 GRIK5Q16478 980 aa24.28■■□□□ 1.48
SMCO4-203ENST00000526869 DOK7Q18PE1 504 aa24.28■■□□□ 1.48
SMCO4-203ENST00000526869 NOL8Q76FK4 1167 aaKnown RBP24.28■■□□□ 1.48
SMCO4-203ENST00000526869 RALYLQ86SE5 291 aaKnown RBP24.28■■□□□ 1.48
SMCO4-203ENST00000526869 TBC1D10CQ8IV04 446 aa24.28■■□□□ 1.48
SMCO4-203ENST00000526869 MB21D2Q8IYB1 491 aaPredicted RBP24.28■■□□□ 1.48
SMCO4-203ENST00000526869 AATFQ9NY61 560 aaKnown RBP eCLIP24.28■■□□□ 1.48
SMCO4-203ENST00000526869 PIM2Q9P1W9 311 aa24.28■■□□□ 1.48
SMCO4-203ENST00000526869 ZNF646O15015 1829 aaPredicted RBP24.27■■□□□ 1.48
SMCO4-203ENST00000526869 MCM5P33992 734 aa24.27■■□□□ 1.48
SMCO4-203ENST00000526869 Q6ZUG5 572 aa24.27■■□□□ 1.48
SMCO4-203ENST00000526869 CNNM2Q9H8M5 875 aa24.27■■□□□ 1.48
SMCO4-203ENST00000526869 ZNF219Q9P2Y4 722 aaPredicted RBP24.27■■□□□ 1.48
SMCO4-203ENST00000526869 GPR75-ASB3A0A0A6YYF3 556 aa24.26■■□□□ 1.47
SMCO4-203ENST00000526869 PLCG2P16885 1265 aa24.26■■□□□ 1.47
SMCO4-203ENST00000526869 STRIP1Q5VSL9 837 aa24.26■■□□□ 1.47
SMCO4-203ENST00000526869 SDR42E1Q8WUS8 393 aa24.26■■□□□ 1.47
SMCO4-203ENST00000526869 STAG1Q8WVM7 1258 aa24.26■■□□□ 1.47
SMCO4-203ENST00000526869 RNF41Q9H4P4 317 aaPredicted RBP24.26■■□□□ 1.47
SMCO4-203ENST00000526869 LAMB1P07942 1786 aa24.26■■□□□ 1.47
SMCO4-203ENST00000526869 PCP11498 1178 aaKnown RBP24.25■■□□□ 1.47
SMCO4-203ENST00000526869 DIXDC1Q155Q3 683 aa24.25■■□□□ 1.47
SMCO4-203ENST00000526869 AKNAD1Q5T1N1 836 aa24.25■■□□□ 1.47
SMCO4-203ENST00000526869 TCEANC2Q96MN5 208 aa24.25■■□□□ 1.47
SMCO4-203ENST00000526869 FOXD4L1Q9NU39 408 aa24.25■■□□□ 1.47
SMCO4-203ENST00000526869 TPCN1Q9ULQ1 816 aa24.25■■□□□ 1.47
SMCO4-203ENST00000526869 ECE2O60344 883 aa24.24■■□□□ 1.47
SMCO4-203ENST00000526869 PPARAQ07869 468 aa24.24■■□□□ 1.47
SMCO4-203ENST00000526869 SBK1Q52WX2 424 aa24.24■■□□□ 1.47
SMCO4-203ENST00000526869 KRT23Q9C075 422 aa24.24■■□□□ 1.47
SMCO4-203ENST00000526869 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.24■■□□□ 1.47
SMCO4-203ENST00000526869 PTGER2P43116 358 aa24.23■■□□□ 1.47
SMCO4-203ENST00000526869 ME3Q16798 604 aa24.23■■□□□ 1.47
SMCO4-203ENST00000526869 DALRD3Q5D0E6 543 aaKnown RBP24.23■■□□□ 1.47
SMCO4-203ENST00000526869 CERS5Q8N5B7 392 aa24.23■■□□□ 1.47
SMCO4-203ENST00000526869 DBNDD1Q9H9R9 158 aa24.23■■□□□ 1.47
SMCO4-203ENST00000526869 DCP1AQ9NPI6 582 aaPredicted RBP24.23■■□□□ 1.47
SMCO4-203ENST00000526869 ARPP21Q9UBL0 812 aaPredicted RBP24.23■■□□□ 1.47
SMCO4-203ENST00000526869 PSME4Q14997 1843 aa24.23■■□□□ 1.47
SMCO4-203ENST00000526869 PPIP5K2O43314 1243 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 PRC1O43663 620 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 LARGE1O95461 756 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 EVCP57679 992 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 NUCB2P80303 420 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 FGD1P98174 961 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 AOC3Q16853 763 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 MFSD6Q6ZSS7 791 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 MRIQ9BWK5 157 aa24.22■■□□□ 1.47
SMCO4-203ENST00000526869 USP17L3A6NCW0 530 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 USP17L4A6NCW7 530 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 BTDP43251 543 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 NT5C2P49902 561 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 DACT2Q5SW24 774 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 USP17L1Q7RTZ2 530 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 BRF1Q92994 677 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 FBXW7Q969H0 707 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 CHMP4CQ96CF2 233 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 MTA3Q9BTC8 594 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 MKRN1Q9UHC7 482 aaKnown RBP24.21■■□□□ 1.47
SMCO4-203ENST00000526869 SCN9AQ15858 1988 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 NAV1Q8NEY1 1877 aa24.21■■□□□ 1.47
SMCO4-203ENST00000526869 BAZ2AQ9UIF9 1905 aaKnown RBP24.2■■□□□ 1.46
SMCO4-203ENST00000526869 NEDD4P46934 1319 aa24.2■■□□□ 1.46
SMCO4-203ENST00000526869 PSDA5PKW4 1024 aaPredicted RBP24.2■■□□□ 1.46
SMCO4-203ENST00000526869 FGRP09769 529 aa24.2■■□□□ 1.46
SMCO4-203ENST00000526869 ANTXR2P58335 489 aa24.2■■□□□ 1.46
SMCO4-203ENST00000526869 HDLBPQ00341 1268 aaKnown RBP24.2■■□□□ 1.46
SMCO4-203ENST00000526869 CTDSPL2Q05D32 466 aa24.2■■□□□ 1.46
SMCO4-203ENST00000526869 RAB3GAP1Q15042 981 aa24.2■■□□□ 1.46
SMCO4-203ENST00000526869 CTR9Q6PD62 1173 aa24.2■■□□□ 1.46
SMCO4-203ENST00000526869 HHIPL2Q6UWX4 724 aa24.2■■□□□ 1.46
SMCO4-203ENST00000526869 SH3RF3Q8TEJ3 882 aaPredicted RBP24.2■■□□□ 1.46
SMCO4-203ENST00000526869 TMEM87BQ96K49 555 aa24.2■■□□□ 1.46
SMCO4-203ENST00000526869 DDX60LQ5H9U9 1706 aaKnown RBP24.19■■□□□ 1.46
SMCO4-203ENST00000526869 ZNF274Q96GC6 653 aaPredicted RBP24.19■■□□□ 1.46
SMCO4-203ENST00000526869 LARP6Q9BRS8 491 aaKnown RBP24.19■■□□□ 1.46
SMCO4-203ENST00000526869 TTF2Q9UNY4 1162 aaKnown RBP24.19■■□□□ 1.46
SMCO4-203ENST00000526869 DAGLAQ9Y4D2 1042 aa24.19■■□□□ 1.46
SMCO4-203ENST00000526869 FER1L6Q2WGJ9 1857 aa24.18■■□□□ 1.46
SMCO4-203ENST00000526869 CDK5RAP2Q96SN8 1893 aa24.18■■□□□ 1.46
SMCO4-203ENST00000526869 SLC3A2P08195 630 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms