RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 ZBED9Q6R2W3 1325 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
ATPAF1-208ENST00000526821 RGPD8O14715 1765 aaPredicted RBP8.18□□□□□ -1.1
ATPAF1-208ENST00000526821 ALBP02768 609 aa8.18□□□□□ -1.1
ATPAF1-208ENST00000526821 SPATA31C1P0DKV0 1188 aa8.18□□□□□ -1.1
ATPAF1-208ENST00000526821 COL8A1P27658 744 aa8.18□□□□□ -1.1
ATPAF1-208ENST00000526821 TMEM94Q12767 1356 aa8.18□□□□□ -1.1
ATPAF1-208ENST00000526821 AATKQ6ZMQ8 1374 aa8.18□□□□□ -1.1
ATPAF1-208ENST00000526821 PNPLA6Q8IY17 1366 aa8.18□□□□□ -1.1
ATPAF1-208ENST00000526821 DCCP43146 1447 aa8.18□□□□□ -1.1
ATPAF1-208ENST00000526821 XYLBO75191 536 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 APBA3O96018 575 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 MTHFSP49914 203 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 TRIM28Q13263 835 aaKnown RBP8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 NME9Q86XW9 330 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 C19orf44Q9H6X5 657 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 JPH1Q9HDC5 661 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 MTMR7Q9Y216 660 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 FNDC3AQ9Y2H6 1198 aaKnown RBP8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 TTC21AQ8NDW8 1320 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 OVOS2A0A0J9YW53 1432 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 OVOS2Q6IE36 1432 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 SMG6Q86US8 1419 aaKnown RBP8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 COL3A1P02461 1466 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 SHPRHQ149N8 1683 aa8.17□□□□□ -1.1
ATPAF1-208ENST00000526821 KRBA1A5PL33 1030 aa8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 RGS9O75916 674 aaPredicted RBP8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 SASH3O75995 380 aa8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 TNNT2P45379 298 aaPredicted RBP8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 NAA30Q147X3 362 aaPredicted RBP8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 DHX32Q7L7V1 743 aaKnown RBP8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 FAM35AQ86V20 835 aa8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 PMFBP1Q8TBY8 1022 aa8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 TRIM11Q96F44 468 aa8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 NACC1Q96RE7 527 aa8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 STARD13Q9Y3M8 1113 aa8.16□□□□□ -1.1
ATPAF1-208ENST00000526821 USP54Q70EL1 1684 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 LRRC7Q96NW7 1537 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 C1orf167Q5SNV9 1468 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 MST1RQ04912 1400 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 OPLAHO14841 1288 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 EGFRP00533 1210 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 PSAPP07602 524 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 TRAPPC3LQ5T215 181 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 PSAPL1Q6NUJ1 521 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 NGDNQ8NEJ9 315 aaKnown RBP8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 SPOCK3Q9BQ16 436 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 SAP130Q9H0E3 1048 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 STIM2Q9P246 746 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 POLKQ9UBT6 870 aa8.15□□□□□ -1.1
ATPAF1-208ENST00000526821 TARSP26639 723 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 RAC1P63000 192 aa8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 WDR43Q15061 677 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 NUDT8Q8WV74 236 aa8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 COG3Q96JB2 828 aa8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 CFAP53Q96M91 514 aa8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 XIRP1Q702N8 1843 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 PIK3C2AO00443 1686 aa8.14□□□□□ -1.11
ATPAF1-208ENST00000526821 ZNF335Q9H4Z2 1342 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 CPB1P15086 417 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 NRLP54845 237 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 GPLD1P80108 840 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 PLAURQ03405 335 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 ELMSAN1Q6PJG2 1045 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 C20orf204Q6ZNR8 217 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 ETFBKMTQ8IXQ9 262 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 TTC16Q8NEE8 873 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 TRPM4Q8TD43 1214 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 FRRS1LQ9P0K9 344 aa8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 CDK12Q9NYV4 1490 aaPredicted RBP8.13□□□□□ -1.11
ATPAF1-208ENST00000526821 MARF1Q9Y4F3 1742 aaKnown RBP8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 KIF1AQ12756 1690 aa8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 RPLP1P05386 114 aaKnown RBP8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 PCSK2P16519 638 aa8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 FBLN1P23142 703 aa8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 GRNP28799 593 aaKnown RBP8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 ZAP70P43403 619 aa8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 C8orf86Q6ZUL3 223 aa8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 TLR7Q9NYK1 1049 aaKnown RBP8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 ZFATQ9P243 1243 aa8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 USP20Q9Y2K6 914 aa8.12□□□□□ -1.11
ATPAF1-208ENST00000526821 MSH6P52701 1360 aa8.11□□□□□ -1.11
ATPAF1-208ENST00000526821 C1QTNF9BB2RNN3 333 aa8.11□□□□□ -1.11
ATPAF1-208ENST00000526821 UBAP1LF5GYI3 381 aa8.11□□□□□ -1.11
ATPAF1-208ENST00000526821 GHRHP01286 108 aa8.11□□□□□ -1.11
ATPAF1-208ENST00000526821 NID1P14543 1247 aa8.11□□□□□ -1.11
ATPAF1-208ENST00000526821 ATF3P18847 181 aa8.11□□□□□ -1.11
ATPAF1-208ENST00000526821 B4GALNT3Q6L9W6 998 aa8.11□□□□□ -1.11
ATPAF1-208ENST00000526821 MAP2P11137 1827 aaKnown RBP8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 ZNF521Q96K83 1311 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 TRPM3Q9HCF6 1732 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 TNFRSF10BO14763 440 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 EIF2AK2P19525 551 aaKnown RBP8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 SOX18P35713 384 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms