RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 CCDC117Q8IWD4 279 aaPredicted RBP16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 GPAA1O43292 621 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 GJC1P36383 396 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 TTC16Q8NEE8 873 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 ATP6V0A2Q9Y487 856 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 AOX1Q06278 1338 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 BAG6P46379 1132 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 GSTA5Q7RTV2 222 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 ARHGEF12Q9NZN5 1544 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 ELP1O95163 1332 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 TUBB4BP68371 445 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 KBTBD3Q8NAB2 608 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 STK24Q9Y6E0 443 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 TCOF1Q13428 1488 aaKnown RBP16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 USP21Q9UK80 565 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 CTAGE9A4FU28 777 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 TRAF5O00463 557 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 SLC1A4P43007 532 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 ZNF174Q15697 407 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 KIAA1524Q8TCG1 905 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 LLPHQ9BRT6 129 aaKnown RBP16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 USP26Q9BXU7 913 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 LGR6Q9HBX8 967 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 GCKRQ14397 625 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 ARFGAP3Q9NP61 516 aa16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
NCAPD3-203ENST00000525964 BIRC3Q13489 604 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 OTUD6BQ8N6M0 293 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 STMN4Q9H169 189 aaPredicted RBP16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 ERVV-2B6SEH9 535 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 SLC8A3P57103 927 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 IFT74Q96LB3 600 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 EPB41P11171 864 aaKnown RBP16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 AKNAD1Q5T1N1 836 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 PLIN2Q99541 437 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 CNGA4Q8IV77 575 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 CCDC50Q8IVM0 306 aa16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 ZNF496Q96IT1 587 aaPredicted RBP16.29■□□□□ 0.2
NCAPD3-203ENST00000525964 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 ARL1P40616 181 aaPredicted RBP16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 FLAD1Q8NFF5 587 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 LZTS2Q9BRK4 669 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 PKD2L1Q9P0L9 805 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 V9GY48 417 aaPredicted RBP16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 ZNF408Q9H9D4 720 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 PLEKHG3A1L390 1219 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 ZBED4O75132 1171 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 MYL5Q02045 173 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 STX10O60499 249 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 CBX1P83916 185 aa16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 DCAF17Q5H9S7 520 aaPredicted RBP16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
NCAPD3-203ENST00000525964 NOP56O00567 594 aaKnown RBP16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 FAM160A1Q05DH4 1040 aa16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 PRDM1O75626 825 aa16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 CNNM4Q6P4Q7 775 aa16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.27■□□□□ 0.23e-7■□□□□ 9.3
NCAPD3-203ENST00000525964 AATFQ9NY61 560 aaKnown RBP eCLIP16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 EXOC7Q9UPT5 735 aa16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 APBA3O96018 575 aa16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 RPS8P62241 208 aaKnown RBP16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 DLGAP5Q15398 846 aa16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 TXNDC16Q9P2K2 825 aa16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 MTUS1Q9ULD2 1270 aa16.27■□□□□ 0.2
NCAPD3-203ENST00000525964 ARHGEF35A5YM69 484 aa16.27■□□□□ 0.19
NCAPD3-203ENST00000525964 TAF5LO75529 589 aa16.27■□□□□ 0.19
NCAPD3-203ENST00000525964 VWA3BQ502W6 1294 aa16.27■□□□□ 0.19
NCAPD3-203ENST00000525964 KRT25Q7Z3Z0 450 aa16.27■□□□□ 0.19
NCAPD3-203ENST00000525964 KLHDC4Q8TBB5 520 aa16.27■□□□□ 0.19
NCAPD3-203ENST00000525964 KIFAP3Q92845 792 aa16.27■□□□□ 0.19
NCAPD3-203ENST00000525964 CEP63Q96MT8 703 aa16.27■□□□□ 0.19
NCAPD3-203ENST00000525964 TMEM110-MUSTN1A8MSY1 372 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 SLC27A2O14975 620 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 RAPGEF1Q13905 1077 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 C8orf34Q49A92 452 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 NSRP1Q9H0G5 558 aaKnown RBP16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 CCDC169A6NNP5 214 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 NDC80O14777 642 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 NOLC1Q14978 699 aaKnown RBP eCLIP16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 PDE4DQ08499 809 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 NONOQ15233 471 aaKnown RBP eCLIP16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 DIS3L2Q8IYB7 885 aaKnown RBP16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 SPATA5Q8NB90 893 aa16.26■□□□□ 0.19
NCAPD3-203ENST00000525964 FBF1Q8TES7 1133 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms