RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 SUZ12Q15022 739 aaKnown RBP10.11□□□□□ -0.79
CTNND1-211ENST00000525821 FOXD4L6Q3SYB3 417 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-211ENST00000525821 FOXD4L3Q6VB84 417 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-211ENST00000525821 SLC7A3Q8WY07 619 aa10.11□□□□□ -0.79
CTNND1-211ENST00000525821 KCNK4Q9NYG8 393 aa10.11□□□□□ -0.79
CTNND1-211ENST00000525821 KDM5CP41229 1560 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 CNTLNQ9NXG0 1405 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 A0A096LPE4 126 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 A0A1W2PPZ6 126 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 SOX1O00570 391 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-211ENST00000525821 GADD45BO75293 160 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-211ENST00000525821 GRIA4P48058 902 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 IKBKEQ14164 716 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 SND1Q7KZF4 910 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNND1-211ENST00000525821 EPS8L3Q8TE67 593 aaKnown RBP10.1□□□□□ -0.79
CTNND1-211ENST00000525821 AKTIPQ9H8T0 292 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 TPSG1Q9NRR2 321 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 ABCA6Q8N139 1617 aa10.1□□□□□ -0.79
CTNND1-211ENST00000525821 F8W735 103 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-211ENST00000525821 FURINP09958 794 aa10.09□□□□□ -0.79
CTNND1-211ENST00000525821 C19orf57Q0VDD7 668 aa10.09□□□□□ -0.79
CTNND1-211ENST00000525821 SPRED3Q2MJR0 410 aa10.09□□□□□ -0.79
CTNND1-211ENST00000525821 MLH3Q9UHC1 1453 aa10.09□□□□□ -0.79
CTNND1-211ENST00000525821 SETD1BQ9UPS6 1966 aaKnown RBP10.08□□□□□ -0.8
CTNND1-211ENST00000525821 NPATQ14207 1427 aa10.08□□□□□ -0.8
CTNND1-211ENST00000525821 AGLP35573 1532 aa10.08□□□□□ -0.8
CTNND1-211ENST00000525821 PNMA6FA0A0J9YX94 578 aa10.08□□□□□ -0.8
CTNND1-211ENST00000525821 DDX3YO15523 660 aaKnown RBP10.08□□□□□ -0.8
CTNND1-211ENST00000525821 ALX3O95076 343 aa10.08□□□□□ -0.8
CTNND1-211ENST00000525821 ESRRAP11474 423 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-211ENST00000525821 ENOX2Q16206 610 aaKnown RBP10.08□□□□□ -0.8
CTNND1-211ENST00000525821 HGSNATQ68CP4 663 aa10.08□□□□□ -0.8
CTNND1-211ENST00000525821 RGS17Q9UGC6 210 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-211ENST00000525821 TCOF1Q13428 1488 aaKnown RBP10.08□□□□□ -0.8
CTNND1-211ENST00000525821 KIF14Q15058 1648 aa10.07□□□□□ -0.8
CTNND1-211ENST00000525821 REREQ9P2R6 1566 aa10.07□□□□□ -0.8
CTNND1-211ENST00000525821 ADAM11O75078 769 aa10.07□□□□□ -0.8
CTNND1-211ENST00000525821 WISP1O95388 367 aa10.07□□□□□ -0.8
CTNND1-211ENST00000525821 DUOXA2Q1HG44 320 aa10.07□□□□□ -0.8
CTNND1-211ENST00000525821 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.07□□□□□ -0.8
CTNND1-211ENST00000525821 FOXD4L4Q8WXT5 416 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-211ENST00000525821 SSBP4Q9BWG4 385 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-211ENST00000525821 NLRP2Q9NX02 1062 aa10.07□□□□□ -0.8
CTNND1-211ENST00000525821 CDK11AQ9UQ88 783 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-211ENST00000525821 PLA2R1Q13018 1463 aa10.06□□□□□ -0.8
CTNND1-211ENST00000525821 MAPK8P45983 427 aa10.06□□□□□ -0.8
CTNND1-211ENST00000525821 FMR1Q06787 632 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTNND1-211ENST00000525821 ACAD11Q709F0 780 aa10.06□□□□□ -0.8
CTNND1-211ENST00000525821 CLEC4MQ9H2X3 399 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-211ENST00000525821 SOX17Q9H6I2 414 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-211ENST00000525821 TRAK1Q9UPV9 953 aa10.06□□□□□ -0.8
CTNND1-211ENST00000525821 NLRP12P59046 1061 aa10.05□□□□□ -0.8
CTNND1-211ENST00000525821 PCDH1Q08174 1060 aa10.05□□□□□ -0.8
CTNND1-211ENST00000525821 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
CTNND1-211ENST00000525821 GGT6Q6P531 493 aa10.05□□□□□ -0.8
CTNND1-211ENST00000525821 AGGF1Q8N302 714 aaeCLIP10.05□□□□□ -0.8
CTNND1-211ENST00000525821 MEGF10Q96KG7 1140 aa10.05□□□□□ -0.8
CTNND1-211ENST00000525821 TROQ12816 1431 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-211ENST00000525821 PTPRKQ15262 1439 aa10.05□□□□□ -0.8
CTNND1-211ENST00000525821 TMEM238LA0A1B0GVL6 79 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 ITPKAP23677 461 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 PTPN12Q05209 780 aaKnown RBP10.04□□□□□ -0.8
CTNND1-211ENST00000525821 GRM2Q14416 872 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 RSPO4Q2I0M5 234 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-211ENST00000525821 ZNF423Q2M1K9 1284 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 UBASH3BQ8TF42 649 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
CTNND1-211ENST00000525821 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-211ENST00000525821 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-211ENST00000525821 ADAM23O75077 832 aa10.03□□□□□ -0.8
CTNND1-211ENST00000525821 NKAPLQ5M9Q1 402 aa10.03□□□□□ -0.8
CTNND1-211ENST00000525821 Q6ZS46 218 aa10.03□□□□□ -0.8
CTNND1-211ENST00000525821 DZIP1LQ8IYY4 767 aaKnown RBP10.03□□□□□ -0.8
CTNND1-211ENST00000525821 GLIS3Q8NEA6 775 aa10.03□□□□□ -0.8
CTNND1-211ENST00000525821 MYO5CQ9NQX4 1742 aa10.03□□□□□ -0.8
CTNND1-211ENST00000525821 PPP4R2Q9NY27 417 aa10.03□□□□□ -0.8
CTNND1-211ENST00000525821 SHANK2Q9UPX8 1470 aa10.03□□□□□ -0.8
CTNND1-211ENST00000525821 CEP170BQ9Y4F5 1589 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-211ENST00000525821 GLB1P16278 677 aa10.02□□□□□ -0.81
CTNND1-211ENST00000525821 HNRNPMP52272 730 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTNND1-211ENST00000525821 GSTM4Q03013 218 aa10.02□□□□□ -0.81
CTNND1-211ENST00000525821 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTNND1-211ENST00000525821 FBF1Q8TES7 1133 aa10.02□□□□□ -0.81
CTNND1-211ENST00000525821 ZNF576Q9H609 170 aa10.02□□□□□ -0.81
CTNND1-211ENST00000525821 SPAG9O60271 1321 aaKnown RBP10.02□□□□□ -0.81
CTNND1-211ENST00000525821 CLIP1P30622 1438 aa10.01□□□□□ -0.81
CTNND1-211ENST00000525821 MYO3AQ8NEV4 1616 aa10.01□□□□□ -0.81
CTNND1-211ENST00000525821 ALKQ9UM73 1620 aa10.01□□□□□ -0.81
CTNND1-211ENST00000525821 ALG1LQ6GMV1 187 aa10.01□□□□□ -0.81
CTNND1-211ENST00000525821 BCO2Q9BYV7 579 aa10.01□□□□□ -0.81
CTNND1-211ENST00000525821 ABCC1P33527 1531 aa10.01□□□□□ -0.81
CTNND1-211ENST00000525821 H2AFB1P0C5Y9 115 aa10□□□□□ -0.81
CTNND1-211ENST00000525821 H2AFB2P0C5Z0 115 aa10□□□□□ -0.81
CTNND1-211ENST00000525821 RUSC1Q9BVN2 902 aa10□□□□□ -0.81
CTNND1-211ENST00000525821 CEP41Q9BYV8 373 aa10□□□□□ -0.81
CTNND1-211ENST00000525821 SEMA6BQ9H3T3 888 aa10□□□□□ -0.81
CTNND1-211ENST00000525821 WWC3Q9ULE0 1092 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms