RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
LTBP3-204ENST00000525443 KIFC2Q96AC6 838 aa16.93■□□□□ 0.3
LTBP3-204ENST00000525443 KAT14Q9H8E8 782 aa16.93■□□□□ 0.3
LTBP3-204ENST00000525443 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
LTBP3-204ENST00000525443 ARMC2Q8NEN0 867 aa16.92■□□□□ 0.3
LTBP3-204ENST00000525443 PARD3BQ8TEW8 1205 aa16.92■□□□□ 0.3
LTBP3-204ENST00000525443 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
LTBP3-204ENST00000525443 ZSCAN12O43309 604 aa16.92■□□□□ 0.3
LTBP3-204ENST00000525443 SYF2O95926 243 aaKnown RBP16.92■□□□□ 0.3
LTBP3-204ENST00000525443 SNX1Q13596 522 aa16.92■□□□□ 0.3
LTBP3-204ENST00000525443 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
LTBP3-204ENST00000525443 BCAS4Q8TDM0 211 aa16.92■□□□□ 0.3
LTBP3-204ENST00000525443 BAG1Q99933 345 aaPredicted RBP16.92■□□□□ 0.3
LTBP3-204ENST00000525443 NUCKS1Q9H1E3 243 aaKnown RBP16.92■□□□□ 0.3
LTBP3-204ENST00000525443 BABAM1Q9NWV8 329 aa16.92■□□□□ 0.3
LTBP3-204ENST00000525443 RAB21Q9UL25 225 aa16.92■□□□□ 0.3
LTBP3-204ENST00000525443 HMMRO75330 724 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 TFRCP02786 760 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 ADCK5Q3MIX3 580 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 JAKMIP1Q96N16 626 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 SH3GL3Q99963 347 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 SPATS2LQ9NUQ6 558 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 IPO7O95373 1038 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 GNAI2P04899 355 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 NAA25Q14CX7 972 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 KARSQ15046 597 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 SRGAP1Q7Z6B7 1085 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 MSL3Q8N5Y2 521 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 MARF1Q9Y4F3 1742 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 PRPF6O94906 941 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 CLSTN1O94985 981 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 MRPL12P52815 198 aaKnown RBP16.91■□□□□ 0.3
LTBP3-204ENST00000525443 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 ADCY9O60503 1353 aa16.91■□□□□ 0.3
LTBP3-204ENST00000525443 RNMTO43148 476 aaKnown RBP16.9■□□□□ 0.3
LTBP3-204ENST00000525443 CUTAO60888 179 aa16.9■□□□□ 0.3
LTBP3-204ENST00000525443 IRAK1P51617 712 aa16.9■□□□□ 0.3
LTBP3-204ENST00000525443 PSMD2Q13200 908 aa16.9■□□□□ 0.3
LTBP3-204ENST00000525443 CCAR1Q8IX12 1150 aaKnown RBP16.9■□□□□ 0.3
LTBP3-204ENST00000525443 GOLPH3LQ9H4A5 285 aa16.9■□□□□ 0.3
LTBP3-204ENST00000525443 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-204ENST00000525443 LTN1O94822 1766 aa16.9■□□□□ 0.3
LTBP3-204ENST00000525443 CHPF2Q9P2E5 772 aa16.9■□□□□ 0.3
LTBP3-204ENST00000525443 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
LTBP3-204ENST00000525443 CTAGE5O15320 804 aa16.89■□□□□ 0.3
LTBP3-204ENST00000525443 ZBTB10Q96DT7 871 aa16.89■□□□□ 0.3
LTBP3-204ENST00000525443 NAT10Q9H0A0 1025 aaKnown RBP16.89■□□□□ 0.3
LTBP3-204ENST00000525443 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
LTBP3-204ENST00000525443 A0A1B0GUA9 196 aa16.89■□□□□ 0.29
LTBP3-204ENST00000525443 MICAL1Q8TDZ2 1067 aa16.89■□□□□ 0.29
LTBP3-204ENST00000525443 SH2B1Q9NRF2 756 aaPredicted RBP16.89■□□□□ 0.29
LTBP3-204ENST00000525443 CEMIPQ8WUJ3 1361 aa16.89■□□□□ 0.29
LTBP3-204ENST00000525443 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
LTBP3-204ENST00000525443 MSANTD4Q8NCY6 345 aa16.89■□□□□ 0.29
LTBP3-204ENST00000525443 TPCN1Q9ULQ1 816 aa16.89■□□□□ 0.29
LTBP3-204ENST00000525443 DPCR1Q3MIW9 517 aa16.88■□□□□ 0.29
LTBP3-204ENST00000525443 WLSQ5T9L3 541 aa16.88■□□□□ 0.29
LTBP3-204ENST00000525443 ZSCAN31Q96LW9 406 aaPredicted RBP16.88■□□□□ 0.29
LTBP3-204ENST00000525443 DDX20Q9UHI6 824 aaKnown RBP16.88■□□□□ 0.29
LTBP3-204ENST00000525443 CEP112Q8N8E3 955 aa16.88■□□□□ 0.29
LTBP3-204ENST00000525443 XAGE2Q96GT9 111 aa16.88■□□□□ 0.29
LTBP3-204ENST00000525443 LSG1Q9H089 658 aaKnown RBP16.88■□□□□ 0.29
LTBP3-204ENST00000525443 KLC4Q9NSK0 619 aa16.88■□□□□ 0.29
LTBP3-204ENST00000525443 KINO60870 393 aaKnown RBP16.87■□□□□ 0.29
LTBP3-204ENST00000525443 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.87■□□□□ 0.29
LTBP3-204ENST00000525443 SHTN1A0MZ66 631 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 RPSAP08865 295 aaKnown RBP16.87■□□□□ 0.29
LTBP3-204ENST00000525443 ATP1A3P13637 1013 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 CEP85LQ5SZL2 805 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 TOGARAM2Q6ZUX3 1019 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 FTOQ9C0B1 505 aaKnown RBP eCLIP16.87■□□□□ 0.29
LTBP3-204ENST00000525443 MST1RQ04912 1400 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 ZNF202O95125 648 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 PDCP20941 246 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 GDAP1L1Q96MZ0 367 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 DESI2Q9BSY9 194 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 LRRCC1Q9C099 1032 aa16.87■□□□□ 0.29
LTBP3-204ENST00000525443 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 BIN1O00499 593 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 SHOX2O60902 331 aaPredicted RBP16.86■□□□□ 0.29
LTBP3-204ENST00000525443 RWDD2BP57060 319 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 CCT2P78371 535 aaKnown RBP16.86■□□□□ 0.29
LTBP3-204ENST00000525443 AMOTL1Q8IY63 956 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 PIK3R5Q8WYR1 880 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 FAM210AQ96ND0 272 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 ENO4A6NNW6 628 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 TATP17735 454 aaPredicted RBP16.86■□□□□ 0.29
LTBP3-204ENST00000525443 DPF2Q92785 391 aa16.86■□□□□ 0.29
LTBP3-204ENST00000525443 KIAA0754O94854 1291 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 UBTFL1P0CB47 393 aaPredicted RBP16.85■□□□□ 0.29
LTBP3-204ENST00000525443 FANCCQ00597 558 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 COL9A3Q14050 684 aaPredicted RBP16.85■□□□□ 0.29
LTBP3-204ENST00000525443 E2F5Q15329 346 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 CCDC73Q6ZRK6 1079 aa16.85■□□□□ 0.29
LTBP3-204ENST00000525443 TCEANC2Q96MN5 208 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms