RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 USP17L20D6RJB6 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 H3BM21 787 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 GMPRP36959 345 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 SMTNP53814 917 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 MRPS5P82675 430 aaKnown RBP5.07□□□□□ -1.6
CSDE1-209ENST00000525132 PTSQ03393 145 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L24Q0WX57 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.07□□□□□ -1.68e-10■□□□□ 9.7
CSDE1-209ENST00000525132 PPARGC1BQ86YN6 1023 aaKnown RBP5.07□□□□□ -1.6
CSDE1-209ENST00000525132 TDHQ8IZJ6 230 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 C7orf43Q8WVR3 580 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 DNAAF2Q9NVR5 837 aaKnown RBP5.07□□□□□ -1.6
CSDE1-209ENST00000525132 SERPINA10Q9UK55 444 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 NCOR2Q9Y618 2525 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 ADAMTSL1Q8N6G6 1762 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 CDH23Q9H251 3354 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 C21orf2O43822 256 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 ATG7O95352 703 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 TBC1D8O95759 1140 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 LMOD1P29536 600 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-209ENST00000525132 ATP1A2P50993 1020 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 UBAP2LQ14157 1087 aaKnown RBP5.06□□□□□ -1.6
CSDE1-209ENST00000525132 CCDC102BQ68D86 513 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 NBPF10Q6P3W6 841 aaKnown RBP5.06□□□□□ -1.6
CSDE1-209ENST00000525132 LYSMD3Q7Z3D4 306 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 NPM2Q86SE8 214 aaKnown RBP5.06□□□□□ -1.6
CSDE1-209ENST00000525132 TPCN2Q8NHX9 752 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 ZDHHC1Q8WTX9 485 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 ARID3AQ99856 593 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 SEMA6BQ9H3T3 888 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 POLMQ9NP87 494 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-209ENST00000525132 SCHIP1Q9P0W5 487 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-209ENST00000525132 CEP152O94986 1710 aa5.06□□□□□ -1.6
CSDE1-209ENST00000525132 METP08581 1390 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 DNAH14Q0VDD8 3507 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 ACEP12821 1306 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 ABCA12Q86UK0 2595 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-209ENST00000525132 A6NJY4 79 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 MEN1O00255 615 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 CDK2AP1O14519 115 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 HIRAP54198 1017 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-209ENST00000525132 C4orf17Q53FE4 359 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 DGLUCYQ7Z3D6 616 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 ZSCAN1Q8NBB4 408 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.05□□□□□ -1.6
CSDE1-209ENST00000525132 NANOS1Q8WY41 292 aaKnown RBP5.05□□□□□ -1.6
CSDE1-209ENST00000525132 ANKS1AQ92625 1134 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 PBXIP1Q96AQ6 731 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 NXF1Q9UBU9 619 aaKnown RBP5.05□□□□□ -1.6
CSDE1-209ENST00000525132 ZFHX2Q9C0A1 2572 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-209ENST00000525132 CLTCL1P53675 1640 aa5.05□□□□□ -1.6
CSDE1-209ENST00000525132 EIF2AK4Q9P2K8 1649 aaKnown RBP5.05□□□□□ -1.6
CSDE1-209ENST00000525132 KIF13BQ9NQT8 1826 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 FIGNL2A6NMB9 653 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 FAM155AB1AL88 458 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-209ENST00000525132 MAN1A2O60476 641 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 PPFIA3O75145 1194 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 ATP4AP20648 1035 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 RASA1P20936 1047 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 EPHX2P34913 555 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 TLR1Q15399 786 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 SLC4A8Q2Y0W8 1093 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 PRR23BQ6ZRT6 265 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 ANKMY2Q8IV38 441 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 CCDC155Q8N6L0 562 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 RHBDD1Q8TEB9 315 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 ARMC5Q96C12 935 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 CSRNP1Q96S65 589 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 CUEDC1Q9NWM3 386 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-209ENST00000525132 CCDC88AQ3V6T2 1871 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 TRPM1Q7Z4N2 1603 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 TCF20Q9UGU0 1960 aaKnown RBP5.04□□□□□ -1.6
CSDE1-209ENST00000525132 SBNO1A3KN83 1393 aa5.04□□□□□ -1.6
CSDE1-209ENST00000525132 SFI1A8K8P3 1242 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 KCNMA1Q12791 1236 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 POU4F2Q12837 409 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 DPYDQ12882 1025 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 OCLNQ16625 522 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 STAG2Q8N3U4 1231 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 STK32AQ8WU08 396 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 ZNF594Q96JF6 807 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-209ENST00000525132 NLRP3Q96P20 1036 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 ZSCAN10Q96SZ4 725 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-209ENST00000525132 HTATIP2Q9BUP3 242 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 VRTNQ9H8Y1 702 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 THEGQ9P2T0 379 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 CDK11AQ9UQ88 783 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-209ENST00000525132 DYRK1BQ9Y463 629 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 CASKIN1Q8WXD9 1431 aa5.03□□□□□ -1.6
CSDE1-209ENST00000525132 NHSQ6T4R5 1651 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 ITPR3Q14573 2671 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 BTAF1O14981 1849 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 AKAP11Q9UKA4 1901 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 GPR25O00155 361 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 EML1O00423 815 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 BACH1O14867 736 aa5.02□□□□□ -1.61
CSDE1-209ENST00000525132 CELF2O95319 508 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms