RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 MCM10Q7L590 875 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 SYNE4Q8N205 404 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 PRDM10Q9NQV6 1147 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 ZNF652Q9Y2D9 606 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 SIPA1L3O60292 1781 aaPredicted RBP9.2□□□□□ -0.94
CASP4-205ENST00000525116 SNRPA1P09661 255 aaKnown RBP9.2□□□□□ -0.94
CASP4-205ENST00000525116 DEFB115Q30KQ5 88 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 CLEC4GQ6UXB4 293 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 RTKN2Q8IZC4 609 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 CNTROBQ8N137 903 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 NGEFQ8N5V2 710 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 CYLDQ9NQC7 956 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 ABT1Q9ULW3 272 aaKnown RBP9.2□□□□□ -0.94
CASP4-205ENST00000525116 MTMR7Q9Y216 660 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 GNEQ9Y223 722 aaKnown RBP9.2□□□□□ -0.94
CASP4-205ENST00000525116 GJA3Q9Y6H8 435 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 RNF123Q5XPI4 1314 aa9.2□□□□□ -0.94
CASP4-205ENST00000525116 COL3A1P02461 1466 aaPredicted RBP9.2□□□□□ -0.94
CASP4-205ENST00000525116 SFI1A8K8P3 1242 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 TCERG1O14776 1098 aaKnown RBP9.19□□□□□ -0.94
CASP4-205ENST00000525116 ARID4AP29374 1257 aaPredicted RBP9.19□□□□□ -0.94
CASP4-205ENST00000525116 IARSP41252 1262 aaKnown RBP9.19□□□□□ -0.94
CASP4-205ENST00000525116 GRM5P41594 1212 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 SCTRP47872 440 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 GRM1Q13255 1194 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 DCTN1Q14203 1278 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 HLFQ16534 295 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 NBPF10Q6P3W6 841 aaKnown RBP9.19□□□□□ -0.94
CASP4-205ENST00000525116 PNMA8AQ86V59 439 aaPredicted RBP9.19□□□□□ -0.94
CASP4-205ENST00000525116 NBPF15Q8N660 670 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 RTF1Q92541 710 aaKnown RBP9.19□□□□□ -0.94
CASP4-205ENST00000525116 MRGPRX2Q96LB1 330 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 HINFPQ9BQA5 517 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 CEMIPQ8WUJ3 1361 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 BCORQ6W2J9 1755 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 SCN4AP35499 1836 aa9.19□□□□□ -0.94
CASP4-205ENST00000525116 M0R2N6 131 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 SIAH2O43255 324 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 DKK1O94907 266 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 ALDH1B1P30837 517 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 SPRYD7Q5W111 196 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 CYP2U1Q7Z449 544 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 JDP2Q8WYK2 163 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 CFAP53Q96M91 514 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 ARFGEF2Q9Y6D5 1785 aa9.18□□□□□ -0.94
CASP4-205ENST00000525116 WDR33Q9C0J8 1336 aaKnown RBP9.17□□□□□ -0.94
CASP4-205ENST00000525116 KLRG2A4D1S0 409 aaPredicted RBP9.17□□□□□ -0.94
CASP4-205ENST00000525116 FZD9O00144 591 aa9.17□□□□□ -0.94
CASP4-205ENST00000525116 BACH1O14867 736 aa9.17□□□□□ -0.94
CASP4-205ENST00000525116 PRMT3O60678 531 aa9.17□□□□□ -0.94
CASP4-205ENST00000525116 U2AF1L5P0DN76 240 aaPredicted RBP9.17□□□□□ -0.94
CASP4-205ENST00000525116 HSPA8P11142 646 aaKnown RBP9.17□□□□□ -0.94
CASP4-205ENST00000525116 U2AF1Q01081 240 aaKnown RBP eCLIP9.17□□□□□ -0.94
CASP4-205ENST00000525116 FMR1Q06787 632 aaKnown RBP eCLIP9.17□□□□□ -0.94
CASP4-205ENST00000525116 PPP1R26Q5T8A7 1209 aaPredicted RBP9.17□□□□□ -0.94
CASP4-205ENST00000525116 ZNF697Q5TEC3 545 aa9.17□□□□□ -0.94
CASP4-205ENST00000525116 GPC2Q8N158 579 aa9.17□□□□□ -0.94
CASP4-205ENST00000525116 TMPRSS4Q9NRS4 437 aa9.17□□□□□ -0.94
CASP4-205ENST00000525116 RASSF10A6NK89 507 aa9.16□□□□□ -0.94
CASP4-205ENST00000525116 GPTP24298 496 aa9.16□□□□□ -0.94
CASP4-205ENST00000525116 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
CASP4-205ENST00000525116 EIF6P56537 245 aaKnown RBP9.16□□□□□ -0.94
CASP4-205ENST00000525116 MAP2K1Q02750 393 aaPredicted RBP9.16□□□□□ -0.94
CASP4-205ENST00000525116 SLC51AQ86UW1 340 aa9.16□□□□□ -0.94
CASP4-205ENST00000525116 RPGRQ92834 1020 aaKnown RBP9.16□□□□□ -0.94
CASP4-205ENST00000525116 EMID1Q96A84 441 aaPredicted RBP9.16□□□□□ -0.94
CASP4-205ENST00000525116 ABHD8Q96I13 439 aa9.16□□□□□ -0.94
CASP4-205ENST00000525116 DDX21Q9NR30 783 aaKnown RBP eCLIP9.16□□□□□ -0.94
CASP4-205ENST00000525116 PLA2G2EQ9NZK7 142 aa9.16□□□□□ -0.94
CASP4-205ENST00000525116 NUDCQ9Y266 331 aa9.16□□□□□ -0.94
CASP4-205ENST00000525116 WASF2Q9Y6W5 498 aa9.16□□□□□ -0.94
CASP4-205ENST00000525116 MYL6BP14649 208 aa9.15□□□□□ -0.94
CASP4-205ENST00000525116 EPS15P42566 896 aa9.15□□□□□ -0.94
CASP4-205ENST00000525116 TAF7Q15545 349 aaPredicted RBP9.15□□□□□ -0.94
CASP4-205ENST00000525116 PHLDB3Q6NSJ2 640 aa9.15□□□□□ -0.94
CASP4-205ENST00000525116 SND1Q7KZF4 910 aaKnown RBP eCLIP9.15□□□□□ -0.94
CASP4-205ENST00000525116 ZNF598Q86UK7 904 aaKnown RBP9.15□□□□□ -0.94
CASP4-205ENST00000525116 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
CASP4-205ENST00000525116 C1orf216Q8TAB5 229 aa9.15□□□□□ -0.94
CASP4-205ENST00000525116 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
CASP4-205ENST00000525116 RRP7AQ9Y3A4 280 aaKnown RBP9.15□□□□□ -0.94
CASP4-205ENST00000525116 ABCC12Q96J65 1359 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 CCDC85CA6NKD9 419 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 TRAF5O00463 557 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 GDF10P55107 478 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 CYP4F22Q6NT55 531 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 TTLL7Q6ZT98 887 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 TSEN2Q8NCE0 465 aaKnown RBP9.14□□□□□ -0.95
CASP4-205ENST00000525116 CAPNS2Q96L46 248 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 PRIMPOLQ96LW4 560 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 PSMD1Q99460 953 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 NYXQ9GZU5 481 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 CXXC1Q9P0U4 656 aaPredicted RBP9.14□□□□□ -0.95
CASP4-205ENST00000525116 ADAMTSL1Q8N6G6 1762 aa9.14□□□□□ -0.95
CASP4-205ENST00000525116 COL4A5P29400 1685 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms