RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 PPP4CP60510 307 aa18.97■□□□□ 0.63
TSPAN4-213ENST00000524895 CFAP100Q494V2 611 aa18.97■□□□□ 0.63
TSPAN4-213ENST00000524895 ZDHHC15Q96MV8 337 aa18.97■□□□□ 0.63
TSPAN4-213ENST00000524895 CRNKL1Q9BZJ0 848 aaKnown RBP18.97■□□□□ 0.63
TSPAN4-213ENST00000524895 LSG1Q9H089 658 aaKnown RBP18.97■□□□□ 0.63
TSPAN4-213ENST00000524895 SLC4A4Q9Y6R1 1079 aa18.97■□□□□ 0.63
TSPAN4-213ENST00000524895 VPS53Q5VIR6 699 aa18.96■□□□□ 0.63
TSPAN4-213ENST00000524895 DPY19L2Q6NUT2 758 aa18.96■□□□□ 0.63
TSPAN4-213ENST00000524895 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
TSPAN4-213ENST00000524895 UTRNP46939 3433 aa18.96■□□□□ 0.63
TSPAN4-213ENST00000524895 DDNO94850 711 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-213ENST00000524895 APPP05067 770 aa18.95■□□□□ 0.62
TSPAN4-213ENST00000524895 HSPD1P10809 573 aaKnown RBP18.95■□□□□ 0.62
TSPAN4-213ENST00000524895 ZNF280AP59817 542 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-213ENST00000524895 PTH1RQ03431 593 aa18.95■□□□□ 0.62
TSPAN4-213ENST00000524895 DLGAP5Q15398 846 aa18.95■□□□□ 0.62
TSPAN4-213ENST00000524895 MICALL2Q8IY33 904 aa18.95■□□□□ 0.62
TSPAN4-213ENST00000524895 DSCC1Q9BVC3 393 aa18.95■□□□□ 0.62
TSPAN4-213ENST00000524895 EPB41L2O43491 1005 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-213ENST00000524895 PRKAB2O43741 272 aa18.94■□□□□ 0.62
TSPAN4-213ENST00000524895 APOBEC3HQ6NTF7 200 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-213ENST00000524895 TEX11Q8IYF3 940 aa18.94■□□□□ 0.62
TSPAN4-213ENST00000524895 NACAP1Q9BZK3 213 aa18.94■□□□□ 0.62
TSPAN4-213ENST00000524895 MYOZ2Q9NPC6 264 aa18.94■□□□□ 0.62
TSPAN4-213ENST00000524895 CNOT7Q9UIV1 285 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-213ENST00000524895 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
TSPAN4-213ENST00000524895 RPAP1Q9BWH6 1393 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 SHTN1A0MZ66 631 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 SPDYE2BA6NHP3 402 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 PATL2C9JE40 543 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 H7C1D1 291 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 SPDYE6P0CI01 402 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 MCCP23508 829 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 LMOD1P29536 600 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 USP5P45974 858 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 RHBDL3P58872 404 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 MTMR14Q8NCE2 650 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 SDR42E1Q8WUS8 393 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 MAP4K1Q92918 833 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 DDRGK1Q96HY6 314 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 USP26Q9BXU7 913 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 USP40Q9NVE5 1235 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 GPRC5DQ9NZD1 345 aa18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-213ENST00000524895 FOXP2O15409 715 aa18.92■□□□□ 0.62
TSPAN4-213ENST00000524895 TDO2P48775 406 aa18.92■□□□□ 0.62
TSPAN4-213ENST00000524895 CDC42EP5Q6NZY7 148 aa18.92■□□□□ 0.62
TSPAN4-213ENST00000524895 GSG1L2A8MUP6 293 aa18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 PRMT6Q96LA8 375 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 C22orf23Q9BZE7 217 aa18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 NAPBQ9H115 298 aa18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 EPB41L4AQ9HCS5 686 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 ATP8A2Q9NTI2 1148 aa18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 TMOD2Q9NZR1 351 aa18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 CTNNA3Q9UI47 895 aa18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 ZMYM6O95789 1325 aa18.91■□□□□ 0.62
TSPAN4-213ENST00000524895 ECM29Q5VYK3 1845 aa18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 NAV1Q8NEY1 1877 aa18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 GLTPD2A6NH11 291 aa18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 MYO1BO43795 1136 aa18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 KIF4BQ2VIQ3 1234 aa18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 TBC1D10BQ4KMP7 808 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 RBM26Q5T8P6 1007 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 GIMAP6Q6P9H5 292 aa18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 IFNL3Q8IZI9 196 aa18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 TGFBRAP1Q8WUH2 860 aa18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 TDRD3Q9H7E2 651 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-213ENST00000524895 FOCADQ5VW36 1801 aa18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 CDK5RAP2Q96SN8 1893 aa18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 FGAP02671 866 aa18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 PICALMQ13492 652 aa18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 ALX1Q15699 326 aa18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 SAMD7Q7Z3H4 446 aa18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 MAPKAPK5Q8IW41 473 aa18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 ZBED3Q96IU2 234 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 L3MBTL3Q96JM7 780 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 DCP1AQ9NPI6 582 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 FLT1P17948 1338 aa18.89■□□□□ 0.61
TSPAN4-213ENST00000524895 WNT10BO00744 389 aa18.88■□□□□ 0.61
TSPAN4-213ENST00000524895 WDHD1O75717 1129 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-213ENST00000524895 HSPA4P34932 840 aa18.88■□□□□ 0.61
TSPAN4-213ENST00000524895 EPS15P42566 896 aa18.88■□□□□ 0.61
TSPAN4-213ENST00000524895 RNF20Q5VTR2 975 aa18.88■□□□□ 0.61
TSPAN4-213ENST00000524895 TBC1D32Q96NH3 1257 aa18.88■□□□□ 0.61
TSPAN4-213ENST00000524895 CLRN2A0PK11 232 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 EGFRP00533 1210 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 CACNB3P54284 484 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 NECTIN1Q15223 517 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 LAMA4Q16363 1823 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 IMMTQ16891 758 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 NBPF9Q3BBW0 867 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 SPDYE2Q495Y8 402 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 DDX60LQ5H9U9 1706 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 CREB3L3Q68CJ9 461 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 AMOTL1Q8IY63 956 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 VEZTQ9HBM0 779 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 ADARB2Q9NS39 739 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 MCM9Q9NXL9 1143 aa18.87■□□□□ 0.61
TSPAN4-213ENST00000524895 ARPP21Q9UBL0 812 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms