RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.48
CAPN11-202ENST00000524554 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.49
CAPN11-202ENST00000524554 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.49
CAPN11-202ENST00000524554 HDLBPQ00341 1268 aaKnown RBP12.01□□□□□ -0.49
CAPN11-202ENST00000524554 CAVIN4Q5BKX8 364 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 APOBEC3HQ6NTF7 200 aaKnown RBP12.01□□□□□ -0.49
CAPN11-202ENST00000524554 VPS37DQ86XT2 251 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 SLC34A2O95436 690 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 CACNB3P54284 484 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 MAP3K9P80192 1104 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 ATG9AQ7Z3C6 839 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
CAPN11-202ENST00000524554 LRRFIP2Q9Y608 721 aaKnown RBP12.01□□□□□ -0.49
CAPN11-202ENST00000524554 EYA2O00167 538 aa12□□□□□ -0.49
CAPN11-202ENST00000524554 FRAT2O75474 233 aaPredicted RBP12□□□□□ -0.49
CAPN11-202ENST00000524554 CRHR2Q13324 411 aa12□□□□□ -0.49
CAPN11-202ENST00000524554 OTOP1Q7RTM1 612 aa12□□□□□ -0.49
CAPN11-202ENST00000524554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN11-202ENST00000524554 TBC1D22AQ8WUA7 517 aa12□□□□□ -0.49
CAPN11-202ENST00000524554 ZDHHC15Q96MV8 337 aa12□□□□□ -0.49
CAPN11-202ENST00000524554 RAB11FIP3O75154 756 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
CAPN11-202ENST00000524554 VGLL4Q14135 290 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 HSP90AB4PQ58FF6 505 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 BMP2KLQ5H9B9 411 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 BRI3BPQ8WY22 251 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 TEKT1Q969V4 418 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 TRIM17Q9Y577 477 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 MYH3P11055 1940 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 SPEF2Q9C093 1822 aa11.99□□□□□ -0.49
CAPN11-202ENST00000524554 PUM3Q15397 648 aaKnown RBP11.98□□□□□ -0.49
CAPN11-202ENST00000524554 OTUD7BQ6GQQ9 843 aa11.98□□□□□ -0.49
CAPN11-202ENST00000524554 SSH3Q8TE77 659 aa11.98□□□□□ -0.49
CAPN11-202ENST00000524554 IPO9Q96P70 1041 aaKnown RBP11.98□□□□□ -0.49
CAPN11-202ENST00000524554 TNNI2P48788 182 aa11.97□□□□□ -0.49
CAPN11-202ENST00000524554 HHIPL2Q6UWX4 724 aa11.97□□□□□ -0.49
CAPN11-202ENST00000524554 CD99L2Q8TCZ2 262 aa11.97□□□□□ -0.49
CAPN11-202ENST00000524554 LPIN2Q92539 896 aa11.97□□□□□ -0.49
CAPN11-202ENST00000524554 ZKSCAN4Q969J2 545 aaPredicted RBP11.97□□□□□ -0.49
CAPN11-202ENST00000524554 LRRCC1Q9C099 1032 aa11.97□□□□□ -0.49
CAPN11-202ENST00000524554 SUGT1Q9Y2Z0 365 aa11.97□□□□□ -0.49
CAPN11-202ENST00000524554 SP3Q02447 781 aa11.96□□□□□ -0.49
CAPN11-202ENST00000524554 FKBP1CQ5VVH2 108 aa11.96□□□□□ -0.49
CAPN11-202ENST00000524554 FAM83AQ86UY5 434 aa11.96□□□□□ -0.49
CAPN11-202ENST00000524554 PTPN22Q9Y2R2 807 aa11.96□□□□□ -0.49
CAPN11-202ENST00000524554 TNRC18O15417 2968 aaPredicted RBP11.96□□□□□ -0.49
CAPN11-202ENST00000524554 PNMA6EA0A0J9YXQ4 647 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 SRGAP3O43295 1099 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 SLC5A1P13866 664 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 GTF2A2P52657 109 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 MTX1Q13505 466 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 POLA2Q14181 598 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 MIGA2Q7L4E1 593 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 FAM43AQ8N2R8 423 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 WDR66Q8TBY9 1149 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 OTUD5Q96G74 571 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 SIL1Q9H173 461 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 PA2G4Q9UQ80 394 aaKnown RBP11.96□□□□□ -0.5
CAPN11-202ENST00000524554 SNCAIPQ9Y6H5 919 aa11.96□□□□□ -0.5
CAPN11-202ENST00000524554 CCL15-CCL14A0A0B4J2E2 113 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 IRF6O14896 467 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 CCL15Q16663 113 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 PLEKHM2Q8IWE5 1019 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 ERO1AQ96HE7 468 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 EFCC1Q9HA90 598 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 CEP126Q9P2H0 1117 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 CSADQ9Y600 493 aa11.95□□□□□ -0.5
CAPN11-202ENST00000524554 SURF6O75683 361 aaKnown RBP11.94□□□□□ -0.5
CAPN11-202ENST00000524554 CIAO1O76071 339 aa11.94□□□□□ -0.5
CAPN11-202ENST00000524554 PRDX5P30044 214 aa11.94□□□□□ -0.5
CAPN11-202ENST00000524554 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
CAPN11-202ENST00000524554 ZFPM1Q8IX07 1006 aa11.94□□□□□ -0.5
CAPN11-202ENST00000524554 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
CAPN11-202ENST00000524554 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
CAPN11-202ENST00000524554 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
CAPN11-202ENST00000524554 DAGLAQ9Y4D2 1042 aa11.94□□□□□ -0.5
CAPN11-202ENST00000524554 AKAP11Q9UKA4 1901 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 APBB1O00213 710 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 PHKA1P46020 1223 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 TIMM10P62072 90 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 TCP10Q12799 353 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 NFIAQ12857 509 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 ATP2B3Q16720 1220 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 CASC1Q6TDU7 716 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 ERO1BQ86YB8 467 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 ERC1Q8IUD2 1116 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 FAM151AQ8WW52 585 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 KIF1BPQ96EK5 621 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 ZFYVE28Q9HCC9 887 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 TMOD2Q9NZR1 351 aa11.93□□□□□ -0.5
CAPN11-202ENST00000524554 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
CAPN11-202ENST00000524554 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms