RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 COL18A1P39060 1754 aa13.26□□□□□ -0.29
PTPRK-217ENST00000524534 GPAA1O43292 621 aa13.26□□□□□ -0.29
PTPRK-217ENST00000524534 ZAP70P43403 619 aa13.26□□□□□ -0.29
PTPRK-217ENST00000524534 GORABQ5T7V8 394 aa13.26□□□□□ -0.29
PTPRK-217ENST00000524534 KRT40Q6A162 431 aa13.26□□□□□ -0.29
PTPRK-217ENST00000524534 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
PTPRK-217ENST00000524534 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.26□□□□□ -0.29
PTPRK-217ENST00000524534 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-217ENST00000524534 ANGEL1Q9UNK9 670 aaKnown RBP13.26□□□□□ -0.29
PTPRK-217ENST00000524534 PARP3Q9Y6F1 533 aa13.26□□□□□ -0.29
PTPRK-217ENST00000524534 C1orf167Q5SNV9 1468 aa13.26□□□□□ -0.29
PTPRK-217ENST00000524534 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 TMEM232C9JQI7 657 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 ZSCAN12O43309 604 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 CSB-PGBD3P0DP91 1061 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
PTPRK-217ENST00000524534 METTL16Q86W50 562 aaKnown RBP13.25□□□□□ -0.29
PTPRK-217ENST00000524534 VWA3AA6NCI4 1184 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 ARHGAP6O43182 974 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 CDKL5O76039 1030 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 TPM1P09493 284 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 METAP2P50579 478 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTPRK-217ENST00000524534 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-217ENST00000524534 HSP90AB3PQ58FF7 597 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 TMCO3Q6UWJ1 677 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 OLFM4Q6UX06 510 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-217ENST00000524534 ELOA2Q8IYF1 753 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-217ENST00000524534 MNS1Q8NEH6 495 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 INTS13Q9NVM9 706 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 FANCLQ9NW38 375 aa13.25□□□□□ -0.29
PTPRK-217ENST00000524534 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-217ENST00000524534 ATP8B1O43520 1251 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 CUTAO60888 179 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 URI1O94763 535 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-217ENST00000524534 A1BGP04217 495 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 CYP2C19P33261 490 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 LONRF3Q496Y0 759 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 CLIC6Q96NY7 704 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 MPHOSPH8Q99549 860 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 PPP2R2CQ9Y2T4 447 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 PARP4Q9UKK3 1724 aaKnown RBP13.24□□□□□ -0.29
PTPRK-217ENST00000524534 ZNF142P52746 1687 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-217ENST00000524534 GOLGA8FQ08AF8 430 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 GOLGA8DPQ0D2H9 430 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 CCDC102BQ68D86 513 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 NKX2-3Q8TAU0 364 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 CARD6Q9BX69 1037 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 PCDHA5Q9Y5H7 936 aa13.24□□□□□ -0.29
PTPRK-217ENST00000524534 BMP6P22004 513 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 CDC27P30260 824 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-217ENST00000524534 PDE4BQ07343 736 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 TRDNQ13061 729 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 TBC1D10CQ8IV04 446 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 NTRK3Q16288 839 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 APOA5Q6Q788 366 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 AEBP2Q6ZN18 517 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-217ENST00000524534 CNNM3Q8NE01 707 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPRK-217ENST00000524534 UBXN6Q9BZV1 441 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 KCNH3Q9ULD8 1083 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 MAP3K15Q6ZN16 1313 aa13.23□□□□□ -0.29
PTPRK-217ENST00000524534 GOLGA6L9A6NEM1 432 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 MAP3K9P80192 1104 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 CPLX2Q6PUV4 134 aaKnown RBP13.22□□□□□ -0.29
PTPRK-217ENST00000524534 PI16Q6UXB8 463 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 PHKBQ93100 1093 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 STX10O60499 249 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 ADD2P35612 726 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
PTPRK-217ENST00000524534 PTPN21Q16825 1174 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 BAG1Q99933 345 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-217ENST00000524534 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRK-217ENST00000524534 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-217ENST00000524534 CALCOCO1Q9P1Z2 691 aa13.22□□□□□ -0.29
PTPRK-217ENST00000524534 ATRNO75882 1429 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 KCPQ6ZWJ8 1503 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 ERICH4A6NGS2 130 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 RANBP6O60518 1105 aaKnown RBP13.21□□□□□ -0.29
PTPRK-217ENST00000524534 ZNF18P17022 549 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 RXRAP19793 462 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 TMEM87BQ96K49 555 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 PLA2G12BQ9BX93 195 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 SENP2Q9HC62 589 aa13.21□□□□□ -0.29
PTPRK-217ENST00000524534 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-217ENST00000524534 CSF1RP07333 972 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 CASQ1P31415 396 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 IARSP41252 1262 aaKnown RBP13.21□□□□□ -0.3
PTPRK-217ENST00000524534 MCAMP43121 646 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 NT5DC1Q5TFE4 455 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms