RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 FKBP1BP68106 108 aa14.61□□□□□ -0.07
CLN8-207ENST00000524258 ADGRA1Q86SQ6 560 aa14.61□□□□□ -0.07
CLN8-207ENST00000524258 OTUD7AQ8TE49 926 aaPredicted RBP14.61□□□□□ -0.07
CLN8-207ENST00000524258 EDC3Q96F86 508 aaKnown RBP14.61□□□□□ -0.07
CLN8-207ENST00000524258 IDI2Q9BXS1 227 aa14.61□□□□□ -0.07
CLN8-207ENST00000524258 TMEM39BQ9GZU3 492 aa14.61□□□□□ -0.07
CLN8-207ENST00000524258 PPP4CP60510 307 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 LDLRAD1Q5T700 205 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 DZIP1Q86YF9 867 aaKnown RBP14.6□□□□□ -0.07
CLN8-207ENST00000524258 ZFPM1Q8IX07 1006 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 C2orf69Q8N8R5 385 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 HAUS7Q99871 368 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 DDX4Q9NQI0 724 aaKnown RBP14.6□□□□□ -0.07
CLN8-207ENST00000524258 USP40Q9NVE5 1235 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 RAI14Q9P0K7 980 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 LRP2BPQ9P2M1 347 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 ABT1Q9ULW3 272 aaKnown RBP14.6□□□□□ -0.07
CLN8-207ENST00000524258 FZD1Q9UP38 647 aa14.6□□□□□ -0.07
CLN8-207ENST00000524258 MYH2Q9UKX2 1941 aa14.59□□□□□ -0.07
CLN8-207ENST00000524258 FAM155AB1AL88 458 aaPredicted RBP14.59□□□□□ -0.07
CLN8-207ENST00000524258 BTDP43251 543 aa14.59□□□□□ -0.07
CLN8-207ENST00000524258 HUNKP57058 714 aa14.59□□□□□ -0.07
CLN8-207ENST00000524258 TNFAIP1Q13829 316 aa14.59□□□□□ -0.07
CLN8-207ENST00000524258 CYP4F22Q6NT55 531 aa14.59□□□□□ -0.07
CLN8-207ENST00000524258 GCC1Q96CN9 775 aa14.59□□□□□ -0.07
CLN8-207ENST00000524258 BOLA2Q9H3K6 86 aa14.59□□□□□ -0.07
CLN8-207ENST00000524258 MYO5AQ9Y4I1 1855 aaKnown RBP14.59□□□□□ -0.07
CLN8-207ENST00000524258 PAPPA2Q9BXP8 1791 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 UBE2Q2LH0YL09 131 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 USP2O75604 605 aaPredicted RBP14.58□□□□□ -0.08
CLN8-207ENST00000524258 LDHCP07864 332 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 GSTO1P78417 241 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 SH3BP5LQ7L8J4 393 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 SLF2Q8IX21 1173 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 FAM151AQ8WW52 585 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 CAPNS2Q96L46 248 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 ECHDC1Q9NTX5 307 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 WDR33Q9C0J8 1336 aaKnown RBP14.58□□□□□ -0.08
CLN8-207ENST00000524258 ATRNL1Q5VV63 1379 aa14.58□□□□□ -0.08
CLN8-207ENST00000524258 RPAP1Q9BWH6 1393 aaPredicted RBP14.58□□□□□ -0.08
CLN8-207ENST00000524258 TCRBV5S4A2TA0A5A2 114 aa14.57□□□□□ -0.08
CLN8-207ENST00000524258 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
CLN8-207ENST00000524258 SUPT20HL1Q3ZLR7 823 aa14.57□□□□□ -0.08
CLN8-207ENST00000524258 TSHZ3Q63HK5 1081 aa14.57□□□□□ -0.08
CLN8-207ENST00000524258 NAA16Q6N069 864 aaPredicted RBP14.57□□□□□ -0.08
CLN8-207ENST00000524258 PI4K2BQ8TCG2 481 aa14.57□□□□□ -0.08
CLN8-207ENST00000524258 ZIC5Q96T25 663 aa14.57□□□□□ -0.08
CLN8-207ENST00000524258 RWDD1Q9H446 243 aaPredicted RBP14.57□□□□□ -0.08
CLN8-207ENST00000524258 GOLIM4O00461 696 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 ENTPD3O75355 529 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 IDH1O75874 414 aaKnown RBP14.56□□□□□ -0.08
CLN8-207ENST00000524258 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
CLN8-207ENST00000524258 CHGBP05060 677 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 TNNI2P48788 182 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 RGS3P49796 1198 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 MAP3K10Q02779 954 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 ANKRD45Q5TZF3 282 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 RGMBQ6NW40 437 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 TMED8Q6PL24 325 aaPredicted RBP14.56□□□□□ -0.08
CLN8-207ENST00000524258 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 PAG1Q9NWQ8 432 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 STAP2Q9UGK3 403 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 DOCK2Q92608 1830 aa14.56□□□□□ -0.08
CLN8-207ENST00000524258 AOC2O75106 756 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 SLC10A3P09131 477 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 PDE6AP16499 860 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 CYP7A1P22680 504 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 DYNLL1P63167 89 aaKnown RBP14.55□□□□□ -0.08
CLN8-207ENST00000524258 PRKG1Q13976 671 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 TTF1Q15361 905 aaPredicted RBP14.55□□□□□ -0.08
CLN8-207ENST00000524258 SLFNL1Q499Z3 407 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 MAGEB6Q8N7X4 407 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 SH3RF3Q8TEJ3 882 aaPredicted RBP14.55□□□□□ -0.08
CLN8-207ENST00000524258 DNAJC2Q99543 621 aaKnown RBP14.55□□□□□ -0.08
CLN8-207ENST00000524258 RIOK1Q9BRS2 568 aaKnown RBP14.55□□□□□ -0.08
CLN8-207ENST00000524258 TMOD2Q9NZR1 351 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 THSD7BQ9C0I4 1608 aa14.55□□□□□ -0.08
CLN8-207ENST00000524258 DDTLA6NHG4 134 aaPredicted RBP14.54□□□□□ -0.08
CLN8-207ENST00000524258 NF2P35240 595 aa14.54□□□□□ -0.08
CLN8-207ENST00000524258 NUCB1Q02818 461 aa14.54□□□□□ -0.08
CLN8-207ENST00000524258 TCP10Q12799 353 aa14.54□□□□□ -0.08
CLN8-207ENST00000524258 MAP3K12Q12852 859 aa14.54□□□□□ -0.08
CLN8-207ENST00000524258 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.54□□□□□ -0.08
CLN8-207ENST00000524258 RASAL3Q86YV0 1011 aa14.54□□□□□ -0.08
CLN8-207ENST00000524258 CLMNQ96JQ2 1002 aa14.54□□□□□ -0.08
CLN8-207ENST00000524258 AATFQ9NY61 560 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLN8-207ENST00000524258 ANGEL1Q9UNK9 670 aaKnown RBP14.54□□□□□ -0.08
CLN8-207ENST00000524258 TTC41PQ6P2S7 1318 aa14.54□□□□□ -0.08
CLN8-207ENST00000524258 MAST2Q6P0Q8 1798 aa14.54□□□□□ -0.08
CLN8-207ENST00000524258 UNCXA6NJT0 531 aa14.53□□□□□ -0.08
CLN8-207ENST00000524258 SLURP2P0DP57 97 aa14.53□□□□□ -0.08
CLN8-207ENST00000524258 ADD2P35612 726 aa14.53□□□□□ -0.08
CLN8-207ENST00000524258 ECE1P42892 770 aa14.53□□□□□ -0.08
CLN8-207ENST00000524258 SLC9C2Q5TAH2 1124 aa14.53□□□□□ -0.08
CLN8-207ENST00000524258 ARMC9Q7Z3E5 817 aa14.53□□□□□ -0.08
CLN8-207ENST00000524258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.53□□□□□ -0.08
CLN8-207ENST00000524258 ZNF112Q9UJU3 913 aa14.53□□□□□ -0.08
CLN8-207ENST00000524258 ZNF532Q9HCE3 1301 aa14.52□□□□□ -0.08
CLN8-207ENST00000524258 PPP1R12BO60237 982 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms