RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, human

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01339-204	ENST00000524094	XRCC5	P13010	732 aa	Known RBP	4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	ALAS2	P22557	587 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	PCBP4	P57723	403 aa	Known RBP	4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	PTPN11	Q06124	597 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	GIMAP6	Q6P9H5	292 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	MPRIP	Q6WCQ1	1025 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	AGMO	Q6ZNB7	445 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	DPH6	Q7L8W6	267 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	ZNF417	Q8TAU3	575 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	UBXN4	Q92575	508 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	LPIN3	Q9BQK8	851 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	LNPK	Q9C0E8	428 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	PPM1H	Q9ULR3	514 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	SOX13	Q9UN79	622 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	TRAK1	Q9UPV9	953 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	AKAP2	Q9Y2D5	859 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	PCDHB5	Q9Y5E4	795 aa		4.24	□□□□□ -1.73
LINC01339-204	ENST00000524094	FAM221A	A4D161	298 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	PF4	P02776	101 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	EIF4A3	P38919	411 aa	Known RBP	4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	CAMK2G	Q13555	558 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	TRAPPC3L	Q5T215	181 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	TPTE2	Q6XPS3	522 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	PDZD3	Q86UT5	571 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	NCAPG2	Q86XI2	1143 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	GRIN3A	Q8TCU5	1115 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	PLD4	Q96BZ4	506 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	NT5C1A	Q9BXI3	368 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	TANGO6	Q9C0B7	1094 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	PIF1	Q9H611	641 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	CCSER2	Q9H7U1	834 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	PRDM6	Q9NQX0	595 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	INPP5F	Q9Y2H2	1132 aa		4.23	□□□□□ -1.73
LINC01339-204	ENST00000524094	ELOA3C	A0A087WX78	387 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	ELOA3D	A6NLF2	546 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	SOX1	O00570	391 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	NID1	P14543	1247 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	DNAJA1	P31689	397 aa	Known RBP	4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	ITGAE	P38570	1179 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	SOX9	P48436	509 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	LIG3	P49916	1009 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	LMNB2	Q03252	620 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	ZNF252P-AS1	Q0IIN9	211 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	CCDC85B	Q15834	202 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	ELOA3B	Q3SY89	546 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	DTHD1	Q6ZMT9	781 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	SLITRK4	Q8IW52	837 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	ELOA3	Q8NG57	546 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	FBXO27	Q8NI29	283 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	TTC9	Q92623	222 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	ARMC5	Q96C12	935 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	NRSN2	Q9GZP1	204 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	GINM1	Q9NU53	330 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	SLC6A14	Q9UN76	642 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	TTF2	Q9UNY4	1162 aa	Known RBP	4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	TRIM33	Q9UPN9	1127 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	RB1CC1	Q8TDY2	1594 aa		4.22	□□□□□ -1.73
LINC01339-204	ENST00000524094	UNC13A	Q9UPW8	1703 aa		4.21	□□□□□ -1.73
LINC01339-204	ENST00000524094	KLF4	O43474	513 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	ESRRA	P11474	423 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	ETFB	P38117	255 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	ZNF157	P51786	506 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	ARID5A	Q03989	594 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	FAM160A1	Q05DH4	1040 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	SERINC3	Q13530	473 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	SF3A1	Q15459	793 aa	Known RBP	4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	MAP3K11	Q16584	847 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	C8orf86	Q6ZUL3	223 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	DTX1	Q86Y01	620 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	ABI1	Q8IZP0	508 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	FAM177A1	Q8N128	213 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	GPRASP2	Q96D09	838 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	PNMA5	Q96PV4	448 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	DNAJC2	Q99543	621 aa	Known RBP	4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	SPON2	Q9BUD6	331 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094	UBP1	Q9NZI7	540 aa		4.21	□□□□□ -1.74
LINC01339-204	ENST00000524094		A0A0A0MRY4	1105 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	B3GALT4	O96024	378 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	F13A1	P00488	732 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	CPB1	P15086	417 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	ATP2B1	P20020	1258 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	GBP2	P32456	591 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	CDK8	P49336	464 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	RPS26	P62854	115 aa	Known RBP	4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	PKN1	Q16512	942 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	CCDC144B	Q3MJ40	725 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	FAM196A	Q6ZSG2	479 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	RELL1	Q8IUW5	271 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	WFDC12	Q8WWY7	111 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	BSND	Q8WZ55	320 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	GAL3ST3	Q96A11	431 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	SEC16B	Q96JE7	1060 aa		4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01339-204	ENST00000524094	PPP4R2	Q9NY27	417 aa		4.2	□□□□□ -1.74

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