RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 NTRK3Q16288 839 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
TNPO1-213ENST00000523768 EPB41L4AQ9HCS5 686 aaPredicted RBP13.14□□□□□ -0.31
TNPO1-213ENST00000523768 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
TNPO1-213ENST00000523768 ZBTB43O43298 467 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
TNPO1-213ENST00000523768 PARP10Q53GL7 1025 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 MPHOSPH8Q99549 860 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 UTP14AQ9BVJ6 771 aaKnown RBP13.13□□□□□ -0.31
TNPO1-213ENST00000523768 CDCA7Q9BWT1 371 aaPredicted RBP13.13□□□□□ -0.31
TNPO1-213ENST00000523768 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 RTL9Q8NET4 1388 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 ZNF202O95125 648 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
TNPO1-213ENST00000523768 GLIPR1L2Q4G1C9 344 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 KRT40Q6A162 431 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 VPS37DQ86XT2 251 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 COL22A1Q8NFW1 1626 aaPredicted RBP13.13□□□□□ -0.31
TNPO1-213ENST00000523768 KAT6BQ8WYB5 2073 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 NAPBQ9H115 298 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 CNNM2Q9H8M5 875 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 SENP2Q9HC62 589 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 FAM217BQ9NTX9 383 aaPredicted RBP13.13□□□□□ -0.31
TNPO1-213ENST00000523768 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
TNPO1-213ENST00000523768 NID2Q14112 1375 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 PPP6R2O75170 966 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 MBD4O95243 580 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 LRRC8AQ8IWT6 810 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 AIFM3Q96NN9 605 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 A0A087WWV3 80 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 SLC3A2P08195 630 aaKnown RBP13.12□□□□□ -0.31
TNPO1-213ENST00000523768 GNAT2P19087 354 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.315e-7■■■□□ 19
TNPO1-213ENST00000523768 IARSP41252 1262 aaKnown RBP13.12□□□□□ -0.31
TNPO1-213ENST00000523768 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 ERCC4Q92889 916 aaPredicted RBP13.12□□□□□ -0.31
TNPO1-213ENST00000523768 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
TNPO1-213ENST00000523768 PNPLA7Q6ZV29 1317 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 FAM237AA0A1B0GTK4 181 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 WDHD1O75717 1129 aaPredicted RBP13.11□□□□□ -0.31
TNPO1-213ENST00000523768 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 PFKFB1P16118 471 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 RXRAP19793 462 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
TNPO1-213ENST00000523768 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 KRT23Q9C075 422 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 RREB1Q92766 1687 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
TNPO1-213ENST00000523768 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
TNPO1-213ENST00000523768 PTPAQ15257 358 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 PHKBQ93100 1093 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 MTA3Q9BTC8 594 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 ARMT1Q9H993 441 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 HPSEQ9Y251 543 aa13.11□□□□□ -0.31
TNPO1-213ENST00000523768 SNAP23O00161 211 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 NLRP12P59046 1061 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
TNPO1-213ENST00000523768 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 STAG1Q8WVM7 1258 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
TNPO1-213ENST00000523768 SLC12A7Q9Y666 1083 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 TACC3Q9Y6A5 838 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
TNPO1-213ENST00000523768 NTSR2O95665 410 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 IFNAR1P17181 557 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 IGHMBP2P38935 993 aaKnown RBP13.1□□□□□ -0.31
TNPO1-213ENST00000523768 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 MAP3K14Q99558 947 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 INCENPQ9NQS7 918 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
TNPO1-213ENST00000523768 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
TNPO1-213ENST00000523768 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
TNPO1-213ENST00000523768 MROH7-TTC4A0A0A0MT08 1334 aa13.1□□□□□ -0.31
TNPO1-213ENST00000523768 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
TNPO1-213ENST00000523768 RIOK3O14730 519 aaKnown RBP13.09□□□□□ -0.31
TNPO1-213ENST00000523768 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
TNPO1-213ENST00000523768 ATP6V1AP38606 617 aa13.09□□□□□ -0.31
TNPO1-213ENST00000523768 TRIM29Q14134 588 aa13.09□□□□□ -0.31
TNPO1-213ENST00000523768 MFSD6Q6ZSS7 791 aa13.09□□□□□ -0.31
TNPO1-213ENST00000523768 NACAP1Q9BZK3 213 aa13.09□□□□□ -0.31
TNPO1-213ENST00000523768 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
TNPO1-213ENST00000523768 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
TNPO1-213ENST00000523768 CHD4Q14839 1912 aa13.09□□□□□ -0.31
TNPO1-213ENST00000523768 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms