RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 SYNGAP1Q96PV0 1343 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 AOC2O75106 756 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 DRD2P14416 443 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 LIG1P18858 919 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 FDX2Q6P4F2 183 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 MPRIPQ6WCQ1 1025 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 ARMC10Q8N2F6 343 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 KCNB2Q92953 911 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 TP53INP1Q96A56 240 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 CBX8Q9HC52 389 aa9.36□□□□□ -0.91
CPNE3-207ENST00000523588 SOX4Q06945 474 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-207ENST00000523588 RSPO4Q2I0M5 234 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-207ENST00000523588 NKAPLQ5M9Q1 402 aa9.35□□□□□ -0.91
CPNE3-207ENST00000523588 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-207ENST00000523588 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
CPNE3-207ENST00000523588 C12orf50Q8NA57 414 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-207ENST00000523588 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
CPNE3-207ENST00000523588 CYP8B1Q9UNU6 501 aa9.35□□□□□ -0.91
CPNE3-207ENST00000523588 ADH5P11766 374 aa9.34□□□□□ -0.91
CPNE3-207ENST00000523588 VAMP1P23763 118 aa9.34□□□□□ -0.91
CPNE3-207ENST00000523588 KIF4BQ2VIQ3 1234 aa9.34□□□□□ -0.91
CPNE3-207ENST00000523588 UVSSAQ2YD98 709 aa9.34□□□□□ -0.91
CPNE3-207ENST00000523588 LLGL2Q6P1M3 1020 aa9.34□□□□□ -0.91
CPNE3-207ENST00000523588 C2CD4AQ8NCU7 369 aaPredicted RBP9.34□□□□□ -0.91
CPNE3-207ENST00000523588 BACH2Q9BYV9 841 aa9.34□□□□□ -0.91
CPNE3-207ENST00000523588 RAD18Q9NS91 495 aa9.34□□□□□ -0.91
CPNE3-207ENST00000523588 KIAA1522Q9P206 1035 aaPredicted RBP9.34□□□□□ -0.91
CPNE3-207ENST00000523588 PCDHGC5Q9Y5F6 944 aa9.34□□□□□ -0.91
CPNE3-207ENST00000523588 LIG3P49916 1009 aa9.33□□□□□ -0.92
CPNE3-207ENST00000523588 RPS26P62854 115 aaKnown RBP9.33□□□□□ -0.92
CPNE3-207ENST00000523588 LRRC14Q15048 493 aa9.33□□□□□ -0.92
CPNE3-207ENST00000523588 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
CPNE3-207ENST00000523588 AKAP4Q5JQC9 854 aa9.33□□□□□ -0.92
CPNE3-207ENST00000523588 AGMOQ6ZNB7 445 aa9.33□□□□□ -0.92
CPNE3-207ENST00000523588 GPBAR1Q8TDU6 330 aa9.33□□□□□ -0.92
CPNE3-207ENST00000523588 PPP1R9AQ9ULJ8 1098 aa9.33□□□□□ -0.92
CPNE3-207ENST00000523588 SART1O43290 800 aaKnown RBP9.32□□□□□ -0.92
CPNE3-207ENST00000523588 TRIM37O94972 964 aa9.32□□□□□ -0.92
CPNE3-207ENST00000523588 SCARA3Q6AZY7 606 aa9.32□□□□□ -0.92
CPNE3-207ENST00000523588 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.32□□□□□ -0.92
CPNE3-207ENST00000523588 UTP4Q969X6 686 aaKnown RBP9.32□□□□□ -0.92
CPNE3-207ENST00000523588 MRRFQ96E11 262 aaKnown RBP9.32□□□□□ -0.92
CPNE3-207ENST00000523588 MYRFLQ96LU7 910 aa9.32□□□□□ -0.92
CPNE3-207ENST00000523588 GSX1Q9H4S2 264 aaPredicted RBP9.32□□□□□ -0.92
CPNE3-207ENST00000523588 RECKO95980 971 aa9.31□□□□□ -0.92
CPNE3-207ENST00000523588 H2AFB1P0C5Y9 115 aa9.31□□□□□ -0.92
CPNE3-207ENST00000523588 H2AFB2P0C5Z0 115 aa9.31□□□□□ -0.92
CPNE3-207ENST00000523588 PTPN11Q06124 597 aaPredicted RBP9.31□□□□□ -0.92
CPNE3-207ENST00000523588 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
CPNE3-207ENST00000523588 TMPRSS2O15393 492 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 FURINP09958 794 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 SLFN14P0C7P3 912 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 RLBP1P12271 317 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 TFE3P19532 575 aaPredicted RBP9.3□□□□□ -0.92
CPNE3-207ENST00000523588 PRR23CQ6ZRP0 262 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 FAM20CQ8IXL6 584 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 TMEM87AQ8NBN3 555 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 PHC3Q8NDX5 983 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 GAL3ST3Q96A11 431 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 RSRP1Q9BUV0 290 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 CRIM1Q9NZV1 1036 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 PCDHB5Q9Y5E4 795 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 ACTL7BQ9Y614 415 aa9.3□□□□□ -0.92
CPNE3-207ENST00000523588 BMP3P12645 472 aa9.29□□□□□ -0.92
CPNE3-207ENST00000523588 TSNAXIP1Q2TAA8 658 aa9.29□□□□□ -0.92
CPNE3-207ENST00000523588 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
CPNE3-207ENST00000523588 TLR6Q9Y2C9 796 aa9.29□□□□□ -0.92
CPNE3-207ENST00000523588 LOC100996750A0A140TA64 210 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 F6X3S4 739 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 DHX15O43143 795 aaKnown RBP9.28□□□□□ -0.92
CPNE3-207ENST00000523588 DYRK3O43781 588 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 GAS2O43903 313 aaKnown RBP9.28□□□□□ -0.92
CPNE3-207ENST00000523588 SGO2Q562F6 1265 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 ZC3H12AQ5D1E8 599 aaKnown RBP9.28□□□□□ -0.92
CPNE3-207ENST00000523588 CDPF1Q6NVV7 123 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 ACSBG1Q96GR2 724 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 KRTAP4-6Q9BYQ5 205 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 FAM105AQ9NUU6 356 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 AP4E1Q9UPM8 1137 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 HIF3AQ9Y2N7 669 aa9.28□□□□□ -0.92
CPNE3-207ENST00000523588 HNRNPUQ00839 825 aaKnown RBP eCLIP9.27□□□□□ -0.93
CPNE3-207ENST00000523588 ID3Q02535 119 aa9.27□□□□□ -0.93
CPNE3-207ENST00000523588 FANCD2OSQ96PS1 177 aa9.27□□□□□ -0.93
CPNE3-207ENST00000523588 COPRSQ9NQ92 184 aa9.27□□□□□ -0.93
CPNE3-207ENST00000523588 DISC1Q9NRI5 854 aa9.27□□□□□ -0.93
CPNE3-207ENST00000523588 RAXQ9Y2V3 346 aa9.27□□□□□ -0.93
CPNE3-207ENST00000523588 SEPT6Q14141 434 aa9.26□□□□□ -0.93
CPNE3-207ENST00000523588 FBLIM1Q8WUP2 373 aa9.26□□□□□ -0.93
CPNE3-207ENST00000523588 RHOVQ96L33 236 aa9.26□□□□□ -0.93
CPNE3-207ENST00000523588 TMEM74Q96NL1 305 aa9.26□□□□□ -0.93
CPNE3-207ENST00000523588 PCDHA4Q9UN74 947 aa9.26□□□□□ -0.93
CPNE3-207ENST00000523588 MAP4P27816 1152 aaKnown RBP9.25□□□□□ -0.93
CPNE3-207ENST00000523588 ASPAP45381 313 aa9.25□□□□□ -0.93
CPNE3-207ENST00000523588 USP11P51784 963 aa9.25□□□□□ -0.93
CPNE3-207ENST00000523588 FANCCQ00597 558 aa9.25□□□□□ -0.93
CPNE3-207ENST00000523588 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-207ENST00000523588 RELL1Q8IUW5 271 aa9.25□□□□□ -0.93
CPNE3-207ENST00000523588 EZH1Q92800 747 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-207ENST00000523588 KBTBD4Q9NVX7 518 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms