RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 DTX1Q86Y01 620 aa7.9□□□□□ -1.14
PCM1-219ENST00000523540 MRRFQ96E11 262 aaKnown RBP7.9□□□□□ -1.14
PCM1-219ENST00000523540 RNF208Q9H0X6 261 aa7.9□□□□□ -1.14
PCM1-219ENST00000523540 SUGCTQ9HAC7 445 aa7.9□□□□□ -1.14
PCM1-219ENST00000523540 KIAA1522Q9P206 1035 aaPredicted RBP7.9□□□□□ -1.14
PCM1-219ENST00000523540 VTI1BQ9UEU0 232 aa7.9□□□□□ -1.14
PCM1-219ENST00000523540 PRR19A6NJB7 356 aa7.89□□□□□ -1.15
PCM1-219ENST00000523540 DHX15O43143 795 aaKnown RBP7.89□□□□□ -1.15
PCM1-219ENST00000523540 WISP1O95388 367 aa7.89□□□□□ -1.15
PCM1-219ENST00000523540 VAMP1P23763 118 aa7.89□□□□□ -1.15
PCM1-219ENST00000523540 NFIAQ12857 509 aa7.89□□□□□ -1.15
PCM1-219ENST00000523540 DUOXA2Q1HG44 320 aa7.89□□□□□ -1.15
PCM1-219ENST00000523540 LDLRAD1Q5T700 205 aa7.89□□□□□ -1.15
PCM1-219ENST00000523540 ANKRD34AQ69YU3 496 aa7.89□□□□□ -1.15
PCM1-219ENST00000523540 INTS5Q6P9B9 1019 aaKnown RBP7.89□□□□□ -1.15
PCM1-219ENST00000523540 CARD10Q9BWT7 1032 aa7.89□□□□□ -1.15
PCM1-219ENST00000523540 USP31Q70CQ4 1352 aa7.88□□□□□ -1.15
PCM1-219ENST00000523540 KIAA1211Q6ZU35 1233 aa7.88□□□□□ -1.15
PCM1-219ENST00000523540 SLC7A3Q8WY07 619 aa7.88□□□□□ -1.15
PCM1-219ENST00000523540 CRELD1Q96HD1 420 aa7.88□□□□□ -1.15
PCM1-219ENST00000523540 BCL11AQ9H165 835 aa7.88□□□□□ -1.15
PCM1-219ENST00000523540 KCNK4Q9NYG8 393 aa7.88□□□□□ -1.15
PCM1-219ENST00000523540 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
PCM1-219ENST00000523540 PPP2R3AQ06190 1150 aa7.87□□□□□ -1.15
PCM1-219ENST00000523540 FZD5Q13467 585 aa7.87□□□□□ -1.15
PCM1-219ENST00000523540 MEI1Q5TIA1 1274 aa7.87□□□□□ -1.15
PCM1-219ENST00000523540 ACAD11Q709F0 780 aa7.87□□□□□ -1.15
PCM1-219ENST00000523540 FAM46AQ96IP4 442 aaKnown RBP7.87□□□□□ -1.15
PCM1-219ENST00000523540 TMPRSS13Q9BYE2 586 aa7.87□□□□□ -1.15
PCM1-219ENST00000523540 CEP44Q9C0F1 390 aa7.87□□□□□ -1.15
PCM1-219ENST00000523540 C7orf69Q9H7B7 122 aa7.87□□□□□ -1.15
PCM1-219ENST00000523540 RBM25P49756 843 aaKnown RBP7.86□□□□□ -1.15
PCM1-219ENST00000523540 ST13P50502 369 aaKnown RBP7.86□□□□□ -1.15
PCM1-219ENST00000523540 ZNF157P51786 506 aaPredicted RBP7.86□□□□□ -1.15
PCM1-219ENST00000523540 TAF1CQ15572 869 aaPredicted RBP7.86□□□□□ -1.15
PCM1-219ENST00000523540 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
PCM1-219ENST00000523540 SMG8Q8ND04 991 aaKnown RBP7.86□□□□□ -1.15
PCM1-219ENST00000523540 NECAB3Q96P71 396 aaPredicted RBP7.86□□□□□ -1.15
PCM1-219ENST00000523540 BACH2Q9BYV9 841 aa7.86□□□□□ -1.15
PCM1-219ENST00000523540 KRT82Q9NSB4 513 aa7.86□□□□□ -1.15
PCM1-219ENST00000523540 TMEM39AQ9NV64 488 aa7.86□□□□□ -1.15
PCM1-219ENST00000523540 HIF3AQ9Y2N7 669 aa7.86□□□□□ -1.15
PCM1-219ENST00000523540 ENC1O14682 589 aa7.85□□□□□ -1.15
PCM1-219ENST00000523540 FBXO24O75426 580 aa7.85□□□□□ -1.15
PCM1-219ENST00000523540 RECKO95980 971 aa7.85□□□□□ -1.15
PCM1-219ENST00000523540 GRIK1P39086 918 aa7.85□□□□□ -1.15
PCM1-219ENST00000523540 TPTE2Q6XPS3 522 aa7.85□□□□□ -1.15
PCM1-219ENST00000523540 DBNDD2Q9BQY9 259 aa7.85□□□□□ -1.15
PCM1-219ENST00000523540 TRIM56Q9BRZ2 755 aaKnown RBP7.85□□□□□ -1.15
PCM1-219ENST00000523540 RUSC1Q9BVN2 902 aa7.85□□□□□ -1.15
PCM1-219ENST00000523540 TTF2Q9UNY4 1162 aaKnown RBP7.85□□□□□ -1.15
PCM1-219ENST00000523540 DDX3YO15523 660 aaKnown RBP7.84□□□□□ -1.15
PCM1-219ENST00000523540 GSTM4Q03013 218 aa7.84□□□□□ -1.15
PCM1-219ENST00000523540 EXOSC6Q5RKV6 272 aaKnown RBP7.84□□□□□ -1.15
PCM1-219ENST00000523540 TRIM42Q8IWZ5 723 aa7.84□□□□□ -1.15
PCM1-219ENST00000523540 CYP4F12Q9HCS2 524 aa7.84□□□□□ -1.15
PCM1-219ENST00000523540 GPN3Q9UHW5 284 aaPredicted RBP7.84□□□□□ -1.15
PCM1-219ENST00000523540 ADGRE2Q9UHX3 823 aa7.84□□□□□ -1.15
PCM1-219ENST00000523540 TIAF1O95411 115 aa7.83□□□□□ -1.16
PCM1-219ENST00000523540 NLRP12P59046 1061 aa7.83□□□□□ -1.16
PCM1-219ENST00000523540 POU4F3Q15319 338 aa7.83□□□□□ -1.16
PCM1-219ENST00000523540 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.83□□□□□ -1.16
PCM1-219ENST00000523540 SV2BQ7L1I2 683 aa7.83□□□□□ -1.16
PCM1-219ENST00000523540 UBASH3BQ8TF42 649 aa7.83□□□□□ -1.16
PCM1-219ENST00000523540 UTP4Q969X6 686 aaKnown RBP7.83□□□□□ -1.16
PCM1-219ENST00000523540 MYRFLQ96LU7 910 aa7.83□□□□□ -1.16
PCM1-219ENST00000523540 EMILIN2Q9BXX0 1053 aa7.83□□□□□ -1.16
PCM1-219ENST00000523540 CACNA2D2Q9NY47 1150 aa7.83□□□□□ -1.16
PCM1-219ENST00000523540 HMX2A2RU54 273 aa7.82□□□□□ -1.16
PCM1-219ENST00000523540 PAGE1O75459 146 aa7.82□□□□□ -1.16
PCM1-219ENST00000523540 CELA3AP09093 270 aa7.82□□□□□ -1.16
PCM1-219ENST00000523540 TSNAXIP1Q2TAA8 658 aa7.82□□□□□ -1.16
PCM1-219ENST00000523540 TMEM87AQ8NBN3 555 aa7.82□□□□□ -1.16
PCM1-219ENST00000523540 CORO1BQ9BR76 489 aa7.82□□□□□ -1.16
PCM1-219ENST00000523540 SAMM50Q9Y512 469 aa7.82□□□□□ -1.16
PCM1-219ENST00000523540 WNT11O96014 354 aa7.81□□□□□ -1.16
PCM1-219ENST00000523540 NME2P22392 152 aa7.81□□□□□ -1.16
PCM1-219ENST00000523540 CCDC85BQ15834 202 aaPredicted RBP7.81□□□□□ -1.16
PCM1-219ENST00000523540 STK35Q8TDR2 534 aa7.81□□□□□ -1.16
PCM1-219ENST00000523540 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
PCM1-219ENST00000523540 BMP6P22004 513 aa7.8□□□□□ -1.16
PCM1-219ENST00000523540 NUTM2GQ5VZR2 741 aa7.8□□□□□ -1.16
PCM1-219ENST00000523540 FDX2Q6P4F2 183 aa7.8□□□□□ -1.16
PCM1-219ENST00000523540 PDZD3Q86UT5 571 aa7.8□□□□□ -1.16
PCM1-219ENST00000523540 CLEC10AQ8IUN9 316 aa7.8□□□□□ -1.16
PCM1-219ENST00000523540 FAM20CQ8IXL6 584 aa7.8□□□□□ -1.16
PCM1-219ENST00000523540 FAM83CQ9BQN1 747 aa7.8□□□□□ -1.16
PCM1-219ENST00000523540 USP26Q9BXU7 913 aa7.8□□□□□ -1.16
PCM1-219ENST00000523540 GSX1Q9H4S2 264 aaPredicted RBP7.8□□□□□ -1.16
PCM1-219ENST00000523540 ECEL1O95672 775 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 DLGAP3O95886 979 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 CTSBP07858 339 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 GSTP1P09211 210 aaKnown RBP7.79□□□□□ -1.16
PCM1-219ENST00000523540 RLBP1P12271 317 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 MAOBP27338 520 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 ARNTP27540 789 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 ZNF252P-AS1Q0IIN9 211 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 RASIP1Q5U651 963 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 SULF2Q8IWU5 870 aa7.79□□□□□ -1.16
PCM1-219ENST00000523540 SHKBP1Q8TBC3 707 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms