RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ACBD3Q9H3P7 528 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 ZSWIM6Q9HCJ5 1215 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 C1orf167Q5SNV9 1468 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 PATL2C9JE40 543 aaKnown RBP14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 DEXIO95424 95 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 ZNF174Q15697 407 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 TCERG1LQ5VWI1 586 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 TGFBRAP1Q8WUH2 860 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 MAP4K1Q92918 833 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 GPCPD1Q9NPB8 672 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 H0YIN7 160 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 UBASH3AP57075 661 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 GTF2IP78347 998 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 HLFQ16534 295 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 PLIN2Q99541 437 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 NCAPD2Q15021 1401 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 MYO3AQ8NEV4 1616 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 TRIM37O94972 964 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 PARP1P09874 1014 aaKnown RBP14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 CCDC40Q4G0X9 1142 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 FAM47AQ5JRC9 791 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 PPP4R3BQ5MIZ7 849 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 TEX35Q5T0J7 233 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 RBM28Q9NW13 759 aaKnown RBP14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 CIAO1O76071 339 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 GSDMDP57764 484 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 MFSD14BQ5SR56 506 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 GAS2L3Q86XJ1 694 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 GTF3C6Q969F1 213 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 ZSCAN12O43309 604 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 KRI1Q8N9T8 703 aaKnown RBP14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 TMX1Q9H3N1 280 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 TTC12Q9H892 705 aaPredicted RBP14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 EXOC1Q9NV70 894 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 URI1O94763 535 aaPredicted RBP14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 FGFR1OPO95684 399 aaKnown RBP14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 TNNT1P13805 278 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 ASIC1P78348 528 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 ANO1Q5XXA6 986 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 KRT40Q6A162 431 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 SMARCC2Q8TAQ2 1214 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 LEO1Q8WVC0 666 aaPredicted RBP14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 GPR108Q9NPR9 543 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 ATG3Q9NT62 314 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 VWA3AA6NCI4 1184 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 KIF20AO95235 890 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 LIG1P18858 919 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 STX17P56962 302 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 LUZP1Q86V48 1076 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 LMBRD1Q9NUN5 540 aa14.92□□□□□ -0.02
PCDHGB1-201ENST00000523390 GNA11P29992 359 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 PPARAQ07869 468 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 TDRD12Q587J7 1177 aaKnown RBP14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 WWC2Q6AWC2 1192 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 SYNE4Q8N205 404 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 PRDM10Q9NQV6 1147 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 KCNJ14Q9UNX9 436 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 TFAP4Q01664 338 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 TCP10Q12799 353 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 KIF18AQ8NI77 898 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 SRP68Q9UHB9 627 aaKnown RBP14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 OVOS2A0A0J9YW53 1432 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 OVOS2Q6IE36 1432 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 H7C1W4 665 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 CYP21A2P08686 494 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 ADD1P35611 737 aaKnown RBP14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 SPA17Q15506 151 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 ERFEQ4G0M1 354 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 PRM3Q9NNZ6 103 aa14.91□□□□□ -0.02
PCDHGB1-201ENST00000523390 FAM160A1Q05DH4 1040 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 ZMYM1Q5SVZ6 1142 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 PI4K2BQ8TCG2 481 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 LETM2Q2VYF4 491 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 RILPL1Q5EBL4 403 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 RBSNQ9H1K0 784 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 NEMFO60524 1076 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 IBSPP21815 317 aaPredicted RBP14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 CMTR1Q8N1G2 835 aaKnown RBP14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 TXLNBQ8N3L3 684 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 UBXN4Q92575 508 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 PALLDQ8WX93 1383 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 PTPRUQ92729 1446 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 SPECC1Q5M775 1068 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 ATL3Q6DD88 541 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 MTERF4Q7Z6M4 381 aaKnown RBP14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 LARGE2Q8N3Y3 721 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 MAP7D2Q96T17 732 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 RMND1Q9NWS8 449 aa14.9□□□□□ -0.02
PCDHGB1-201ENST00000523390 MAST3O60307 1309 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 SKIDA1Q1XH10 827 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 KIF4BQ2VIQ3 1234 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 SUSD4Q5VX71 490 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 DTHD1Q6ZMT9 781 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 PIK3AP1Q6ZUJ8 805 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 TTLL11Q8NHH1 800 aa14.89□□□□□ -0.03
PCDHGB1-201ENST00000523390 SPDYE3A6NKU9 549 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms