RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 GJA8P48165 433 aa7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 ZC3H6P61129 1189 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 AP3B2Q13367 1082 aa7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 FAM117BQ6P1L5 589 aa7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 DTWD1Q8N5C7 304 aa7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 JARID2Q92833 1246 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 KCNB2Q92953 911 aa7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 C8orf37Q96NL8 207 aa7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 SPON2Q9BUD6 331 aa7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 PCDHGC5Q9Y5F6 944 aa7.41□□□□□ -1.22
CTNNA1-238ENST00000523298 TLR3O15455 904 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-238ENST00000523298 INPP5AQ14642 412 aa7.4□□□□□ -1.22
CTNNA1-238ENST00000523298 KIAA0825Q8IV33 1275 aa7.4□□□□□ -1.22
CTNNA1-238ENST00000523298 CYP8B1Q9UNU6 501 aa7.4□□□□□ -1.22
CTNNA1-238ENST00000523298 ALX3O95076 343 aa7.39□□□□□ -1.23
CTNNA1-238ENST00000523298 ARL4DP49703 201 aa7.39□□□□□ -1.23
CTNNA1-238ENST00000523298 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-238ENST00000523298 PWP1Q13610 501 aa7.39□□□□□ -1.23
CTNNA1-238ENST00000523298 AGGF1Q8N302 714 aaeCLIP7.39□□□□□ -1.23
CTNNA1-238ENST00000523298 WDR18Q9BV38 432 aa7.39□□□□□ -1.23
CTNNA1-238ENST00000523298 CILPO75339 1184 aa7.38□□□□□ -1.23
CTNNA1-238ENST00000523298 CYP11A1P05108 521 aa7.38□□□□□ -1.23
CTNNA1-238ENST00000523298 RLBP1P12271 317 aa7.38□□□□□ -1.23
CTNNA1-238ENST00000523298 SNAP47Q5SQN1 464 aa7.38□□□□□ -1.23
CTNNA1-238ENST00000523298 FAM196AQ6ZSG2 479 aa7.38□□□□□ -1.23
CTNNA1-238ENST00000523298 MAP4K3Q8IVH8 894 aa7.38□□□□□ -1.23
CTNNA1-238ENST00000523298 CORO1BQ9BR76 489 aa7.38□□□□□ -1.23
CTNNA1-238ENST00000523298 INPP5FQ9Y2H2 1132 aa7.38□□□□□ -1.23
CTNNA1-238ENST00000523298 TRIM37O94972 964 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 ELNP15502 786 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 RAC1P63000 192 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 TRIM28Q13263 835 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 DUOXA2Q1HG44 320 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 LRFN4Q6PJG9 635 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 RASGRP4Q8TDF6 673 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 GATAD2BQ8WXI9 593 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 GPRASP2Q96D09 838 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 NT5C1AQ9BXI3 368 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 EMILIN2Q9BXX0 1053 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 TMPRSS13Q9BYE2 586 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 MIR1-1HGQ9H1L0 117 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 PPP1R9AQ9ULJ8 1098 aa7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 POLR3KQ9Y2Y1 108 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 SUPT16HQ9Y5B9 1047 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-238ENST00000523298 AOC2O75106 756 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 PDE3AQ14432 1141 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 LRRC14Q15048 493 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 KIF4BQ2VIQ3 1234 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 ACAD11Q709F0 780 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 BEND7Q8N7W2 519 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 PLPPR2Q96GM1 343 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 KRT82Q9NSB4 513 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 GINM1Q9NU53 330 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 CSADQ9Y600 493 aa7.36□□□□□ -1.23
CTNNA1-238ENST00000523298 RBAK-RBAKDNI3L0D1 243 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 GFRA2O00451 464 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 DRD2P14416 443 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 GSK3AP49840 483 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 SEZ6Q53EL9 994 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 SLC43A3Q8NBI5 491 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 LRRC3Q9BY71 257 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 PCDHA4Q9UN74 947 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 SAMM50Q9Y512 469 aa7.35□□□□□ -1.23
CTNNA1-238ENST00000523298 DCDC2CA8MYV0 355 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 F8W735 103 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 FGRP09769 529 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 NTF4P34130 210 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 ZC3H12AQ5D1E8 599 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 WIPI1Q5MNZ9 446 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 IGF2-ASQ6U949 168 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 UBE3DQ7Z6J8 389 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 CCDC84Q86UT8 332 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 MCF2L2Q86YR7 1114 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 SLITRK4Q8IW52 837 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 DDX54Q8TDD1 881 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 GMLQ99445 158 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 RUSC1Q9BVN2 902 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 EFR3BQ9Y2G0 817 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 CORINQ9Y5Q5 1042 aa7.34□□□□□ -1.23
CTNNA1-238ENST00000523298 KRBA1A5PL33 1030 aa7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 TMPRSS2O15393 492 aa7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 GRIN3BO60391 1043 aa7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 DNAJA1P31689 397 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 RING1Q06587 406 aa7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 APOBRQ0VD83 1088 aa7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 REC114Q7Z4M0 266 aa7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 PODNQ7Z5L7 613 aa7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 C12orf40Q86WS4 652 aa7.33□□□□□ -1.24
CTNNA1-238ENST00000523298 MEGF11A6BM72 1044 aa7.32□□□□□ -1.24
CTNNA1-238ENST00000523298 DNAJA2O60884 412 aa7.32□□□□□ -1.24
CTNNA1-238ENST00000523298 TIAF1O95411 115 aa7.32□□□□□ -1.24
CTNNA1-238ENST00000523298 SPATA31C1P0DKV0 1188 aa7.32□□□□□ -1.24
CTNNA1-238ENST00000523298 NOS3P29474 1203 aa7.32□□□□□ -1.24
CTNNA1-238ENST00000523298 NASPP49321 788 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-238ENST00000523298 RPL6Q02878 288 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-238ENST00000523298 CLCQ05315 142 aa7.32□□□□□ -1.24
CTNNA1-238ENST00000523298 MPP2Q14168 576 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms