RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 INPP5BP32019 993 aa17.81■□□□□ 0.44
NKX3-1-202ENST00000523261 CACNB3P54284 484 aa17.81■□□□□ 0.44
NKX3-1-202ENST00000523261 CCDC146Q8IYE0 955 aa17.81■□□□□ 0.44
NKX3-1-202ENST00000523261 LAMA2P24043 3122 aaKnown RBP17.8■□□□□ 0.44
NKX3-1-202ENST00000523261 COL9A1P20849 921 aa17.8■□□□□ 0.44
NKX3-1-202ENST00000523261 NEXNQ0ZGT2 675 aa17.8■□□□□ 0.44
NKX3-1-202ENST00000523261 TDRD7Q8NHU6 1098 aaKnown RBP17.8■□□□□ 0.44
NKX3-1-202ENST00000523261 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.8■□□□□ 0.44
NKX3-1-202ENST00000523261 PRUNE2Q8WUY3 3088 aa17.8■□□□□ 0.44
NKX3-1-202ENST00000523261 ZNF853P0CG23 659 aa17.79■□□□□ 0.44
NKX3-1-202ENST00000523261 CASP7P55210 303 aa17.79■□□□□ 0.44
NKX3-1-202ENST00000523261 GPAT2Q6NUI2 795 aa17.79■□□□□ 0.44
NKX3-1-202ENST00000523261 FAM83AQ86UY5 434 aa17.79■□□□□ 0.44
NKX3-1-202ENST00000523261 HOOK2Q96ED9 719 aa17.79■□□□□ 0.44
NKX3-1-202ENST00000523261 NBPF3Q9H094 633 aa17.79■□□□□ 0.44
NKX3-1-202ENST00000523261 COL2A1P02458 1487 aaPredicted RBP17.79■□□□□ 0.44
NKX3-1-202ENST00000523261 ANKRD18BA2A2Z9 1011 aa17.78■□□□□ 0.44
NKX3-1-202ENST00000523261 GRIK5Q16478 980 aa17.78■□□□□ 0.44
NKX3-1-202ENST00000523261 DCAF15Q66K64 600 aa17.78■□□□□ 0.44
NKX3-1-202ENST00000523261 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
NKX3-1-202ENST00000523261 FAM161BQ96MY7 647 aa17.78■□□□□ 0.44
NKX3-1-202ENST00000523261 ZNF341Q9BYN7 854 aa17.78■□□□□ 0.44
NKX3-1-202ENST00000523261 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
NKX3-1-202ENST00000523261 DOCK3Q8IZD9 2030 aa17.77■□□□□ 0.44
NKX3-1-202ENST00000523261 TNPO2O14787 897 aaKnown RBP17.77■□□□□ 0.44
NKX3-1-202ENST00000523261 MIGA2Q7L4E1 593 aa17.77■□□□□ 0.44
NKX3-1-202ENST00000523261 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.43
NKX3-1-202ENST00000523261 HDLBPQ00341 1268 aaKnown RBP17.76■□□□□ 0.43
NKX3-1-202ENST00000523261 GCKRQ14397 625 aa17.76■□□□□ 0.43
NKX3-1-202ENST00000523261 FKBP1CQ5VVH2 108 aa17.76■□□□□ 0.43
NKX3-1-202ENST00000523261 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
NKX3-1-202ENST00000523261 C8orf58Q8NAV2 365 aa17.76■□□□□ 0.43
NKX3-1-202ENST00000523261 ZNF112Q9UJU3 913 aa17.76■□□□□ 0.43
NKX3-1-202ENST00000523261 MUC3AQ02505 3323 aa17.76■□□□□ 0.43
NKX3-1-202ENST00000523261 RUNDC1Q96C34 613 aa17.75■□□□□ 0.43
NKX3-1-202ENST00000523261 C11orf49Q9H6J7 331 aa17.75■□□□□ 0.43
NKX3-1-202ENST00000523261 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
NKX3-1-202ENST00000523261 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
NKX3-1-202ENST00000523261 CXCL11O14625 94 aa17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 PLIN1O60240 522 aa17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 HIBADHP31937 336 aaKnown RBP17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 GYG1P46976 350 aa17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 IFIT5Q13325 482 aaKnown RBP17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 NOL9Q5SY16 702 aaKnown RBP17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 MAFAQ8NHW3 353 aaPredicted RBP17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 TEKT1Q969V4 418 aa17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 FAM84BQ96KN1 310 aaPredicted RBP17.73■□□□□ 0.43
NKX3-1-202ENST00000523261 PFASO15067 1338 aa17.72■□□□□ 0.43
NKX3-1-202ENST00000523261 APOBEC3HQ6NTF7 200 aaKnown RBP17.72■□□□□ 0.43
NKX3-1-202ENST00000523261 ZDHHC15Q96MV8 337 aa17.72■□□□□ 0.43
NKX3-1-202ENST00000523261 CDX2Q99626 313 aaPredicted RBP17.72■□□□□ 0.43
NKX3-1-202ENST00000523261 IFT57Q9NWB7 429 aa17.72■□□□□ 0.43
NKX3-1-202ENST00000523261 RAPGEFL1Q9UHV5 662 aa17.72■□□□□ 0.43
NKX3-1-202ENST00000523261 HMGCRP04035 888 aa17.71■□□□□ 0.43
NKX3-1-202ENST00000523261 FOXO4P98177 505 aa17.71■□□□□ 0.43
NKX3-1-202ENST00000523261 MDM2Q00987 491 aaPredicted RBP17.71■□□□□ 0.43
NKX3-1-202ENST00000523261 ZNF697Q5TEC3 545 aa17.71■□□□□ 0.43
NKX3-1-202ENST00000523261 SYMPKQ92797 1274 aaKnown RBP17.71■□□□□ 0.43
NKX3-1-202ENST00000523261 COA7Q96BR5 231 aa17.71■□□□□ 0.43
NKX3-1-202ENST00000523261 CHMP4AQ9BY43 222 aa17.71■□□□□ 0.43
NKX3-1-202ENST00000523261 OGDHLQ9ULD0 1010 aa17.71■□□□□ 0.43
NKX3-1-202ENST00000523261 A0A0G2JLL6 359 aaPredicted RBP17.7■□□□□ 0.42
NKX3-1-202ENST00000523261 GNAI1P63096 354 aa17.7■□□□□ 0.42
NKX3-1-202ENST00000523261 FASTKD5Q7L8L6 764 aaKnown RBP17.7■□□□□ 0.42
NKX3-1-202ENST00000523261 PRRT2Q7Z6L0 340 aaPredicted RBP17.7■□□□□ 0.42
NKX3-1-202ENST00000523261 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
NKX3-1-202ENST00000523261 MRIQ9BWK5 157 aa17.7■□□□□ 0.42
NKX3-1-202ENST00000523261 HMX1Q9NP08 348 aaPredicted RBP17.7■□□□□ 0.42
NKX3-1-202ENST00000523261 SLC45A1Q9Y2W3 748 aa17.7■□□□□ 0.42
NKX3-1-202ENST00000523261 TRIM32Q13049 653 aa17.69■□□□□ 0.42
NKX3-1-202ENST00000523261 UBE4AQ14139 1066 aa17.69■□□□□ 0.42
NKX3-1-202ENST00000523261 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
NKX3-1-202ENST00000523261 G2E3Q7L622 706 aa17.69■□□□□ 0.42
NKX3-1-202ENST00000523261 MYH16Q9H6N6 1097 aa17.69■□□□□ 0.42
NKX3-1-202ENST00000523261 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
NKX3-1-202ENST00000523261 COL6A1P12109 1028 aa17.68■□□□□ 0.42
NKX3-1-202ENST00000523261 PLA2G5P39877 138 aa17.68■□□□□ 0.42
NKX3-1-202ENST00000523261 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
NKX3-1-202ENST00000523261 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
NKX3-1-202ENST00000523261 FAM151AQ8WW52 585 aa17.68■□□□□ 0.42
NKX3-1-202ENST00000523261 IQSEC3Q9UPP2 1182 aaPredicted RBP17.68■□□□□ 0.42
NKX3-1-202ENST00000523261 PTPRFP10586 1907 aa17.68■□□□□ 0.42
NKX3-1-202ENST00000523261 CDH23Q9H251 3354 aa17.67■□□□□ 0.42
NKX3-1-202ENST00000523261 CHAF1AQ13111 956 aaPredicted RBP17.67■□□□□ 0.42
NKX3-1-202ENST00000523261 GADL1Q6ZQY3 521 aa17.67■□□□□ 0.42
NKX3-1-202ENST00000523261 TBC1D22AQ8WUA7 517 aa17.67■□□□□ 0.42
NKX3-1-202ENST00000523261 CNNM1Q9NRU3 951 aa17.67■□□□□ 0.42
NKX3-1-202ENST00000523261 ZHX2Q9Y6X8 837 aa17.67■□□□□ 0.42
NKX3-1-202ENST00000523261 LRRC26Q2I0M4 334 aa17.66■□□□□ 0.42
NKX3-1-202ENST00000523261 FBXO33Q7Z6M2 555 aa17.66■□□□□ 0.42
NKX3-1-202ENST00000523261 ANKRD13CQ8N6S4 541 aa17.66■□□□□ 0.42
NKX3-1-202ENST00000523261 LINS1Q8NG48 757 aa17.66■□□□□ 0.42
NKX3-1-202ENST00000523261 SEMA6BQ9H3T3 888 aa17.66■□□□□ 0.42
NKX3-1-202ENST00000523261 AK9Q5TCS8 1911 aa17.65■□□□□ 0.42
NKX3-1-202ENST00000523261 TNFRSF10AO00220 468 aa17.65■□□□□ 0.42
NKX3-1-202ENST00000523261 FAM110CQ1W6H9 321 aa17.65■□□□□ 0.42
NKX3-1-202ENST00000523261 HHIPL2Q6UWX4 724 aa17.65■□□□□ 0.42
NKX3-1-202ENST00000523261 LMBR1LQ6UX01 489 aa17.65■□□□□ 0.42
NKX3-1-202ENST00000523261 MYLIPQ8WY64 445 aa17.65■□□□□ 0.42
NKX3-1-202ENST00000523261 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms