RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 FAM84AQ96KN4 292 aa6.16□□□□□ -1.42
PCM1-217ENST00000522998 TRIM56Q9BRZ2 755 aaKnown RBP6.16□□□□□ -1.42
PCM1-217ENST00000522998 VAV3Q9UKW4 847 aa6.16□□□□□ -1.42
PCM1-217ENST00000522998 POLR3DP05423 398 aaPredicted RBP6.15□□□□□ -1.42
PCM1-217ENST00000522998 FAM87AP0C7U9 286 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 CD96P40200 585 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 GRIA4P48058 902 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 PRKCQQ04759 706 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 CDK5R2Q13319 367 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 PDE3AQ14432 1141 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 SPRED3Q2MJR0 410 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 GTF3C2Q8WUA4 911 aaPredicted RBP6.15□□□□□ -1.42
PCM1-217ENST00000522998 LIN7BQ9HAP6 207 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 ZFYVE28Q9HCC9 887 aa6.15□□□□□ -1.42
PCM1-217ENST00000522998 MESP2Q0VG99 397 aa6.14□□□□□ -1.43
PCM1-217ENST00000522998 WDR18Q9BV38 432 aa6.14□□□□□ -1.43
PCM1-217ENST00000522998 PPP1R9AQ9ULJ8 1098 aa6.14□□□□□ -1.43
PCM1-217ENST00000522998 A0A1W2PP55 124 aa6.13□□□□□ -1.43
PCM1-217ENST00000522998 LRRC10BA6NIK2 292 aa6.13□□□□□ -1.43
PCM1-217ENST00000522998 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
PCM1-217ENST00000522998 B3GALT4O96024 378 aa6.13□□□□□ -1.43
PCM1-217ENST00000522998 MTMR3Q13615 1198 aa6.13□□□□□ -1.43
PCM1-217ENST00000522998 IFI16Q16666 785 aaKnown RBP6.13□□□□□ -1.43
PCM1-217ENST00000522998 BHLHE22Q8NFJ8 381 aaPredicted RBP6.13□□□□□ -1.43
PCM1-217ENST00000522998 TCF12Q99081 682 aa6.13□□□□□ -1.43
PCM1-217ENST00000522998 PIDD1Q9HB75 910 aa6.13□□□□□ -1.43
PCM1-217ENST00000522998 AOC3Q16853 763 aa6.12□□□□□ -1.43
PCM1-217ENST00000522998 ARHGAP27Q6ZUM4 889 aa6.12□□□□□ -1.43
PCM1-217ENST00000522998 CCER1Q8TC90 406 aaPredicted RBP6.12□□□□□ -1.43
PCM1-217ENST00000522998 PBXIP1Q96AQ6 731 aa6.12□□□□□ -1.43
PCM1-217ENST00000522998 HRASLS5Q96KN8 279 aa6.12□□□□□ -1.43
PCM1-217ENST00000522998 SYNGAP1Q96PV0 1343 aa6.12□□□□□ -1.43
PCM1-217ENST00000522998 TMPRSS2O15393 492 aa6.11□□□□□ -1.43
PCM1-217ENST00000522998 ANGEL2Q5VTE6 544 aaKnown RBP6.11□□□□□ -1.43
PCM1-217ENST00000522998 ZSWIM9Q86XI8 627 aa6.11□□□□□ -1.43
PCM1-217ENST00000522998 GALNT12Q8IXK2 581 aa6.11□□□□□ -1.43
PCM1-217ENST00000522998 TOX2Q96NM4 488 aa6.11□□□□□ -1.43
PCM1-217ENST00000522998 KRTAP4-5Q9BYR2 181 aa6.11□□□□□ -1.43
PCM1-217ENST00000522998 MKNK2Q9HBH9 465 aa6.11□□□□□ -1.43
PCM1-217ENST00000522998 FAM53CQ9NYF3 392 aa6.11□□□□□ -1.43
PCM1-217ENST00000522998 U3KQE9 123 aa6.11□□□□□ -1.43
PCM1-217ENST00000522998 TMEM265A0A087WTH1 108 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 FZD6O60353 706 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 FAM13AO94988 1023 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 CEACAM5P06731 702 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 ZNF865P0CJ78 1059 aaPredicted RBP6.1□□□□□ -1.43
PCM1-217ENST00000522998 NPR3P17342 541 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 RAP1GAPP47736 663 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 AP3B2Q13367 1082 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 SLC23A3Q6PIS1 610 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 GJD3Q8N144 294 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 FLAD1Q8NFF5 587 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 ATXN3LQ9H3M9 355 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 ZNF576Q9H609 170 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.1□□□□□ -1.43
PCM1-217ENST00000522998 CRIM1Q9NZV1 1036 aa6.1□□□□□ -1.43
PCM1-217ENST00000522998 KCNMB1Q16558 191 aa6.09□□□□□ -1.43
PCM1-217ENST00000522998 MLANAQ16655 118 aa6.09□□□□□ -1.43
PCM1-217ENST00000522998 CILP2Q8IUL8 1156 aa6.09□□□□□ -1.43
PCM1-217ENST00000522998 SMYD4Q8IYR2 804 aaPredicted RBP6.09□□□□□ -1.43
PCM1-217ENST00000522998 LEFTY1O75610 366 aa6.08□□□□□ -1.44
PCM1-217ENST00000522998 SLFN14P0C7P3 912 aa6.08□□□□□ -1.44
PCM1-217ENST00000522998 LIG1P18858 919 aa6.08□□□□□ -1.44
PCM1-217ENST00000522998 CFPP27918 469 aa6.08□□□□□ -1.44
PCM1-217ENST00000522998 OXCT1P55809 520 aa6.08□□□□□ -1.44
PCM1-217ENST00000522998 ID3Q02535 119 aa6.08□□□□□ -1.44
PCM1-217ENST00000522998 ZSCAN18Q8TBC5 510 aaPredicted RBP6.08□□□□□ -1.44
PCM1-217ENST00000522998 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
PCM1-217ENST00000522998 ZNF503-AS2A6NEH8 195 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 TSPAN15O95858 294 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 ITIH2P19823 946 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 ITPKAP23677 461 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 KIAA0319Q5VV43 1072 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 LILRA6Q6PI73 481 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 WDR89Q96FK6 387 aaPredicted RBP6.07□□□□□ -1.44
PCM1-217ENST00000522998 PPP1R16BQ96T49 567 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 DUSP23Q9BVJ7 150 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 CCDC86Q9H6F5 360 aaKnown RBP6.07□□□□□ -1.44
PCM1-217ENST00000522998 PRDM7Q9NQW5 492 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 CCDC87Q9NVE4 849 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 PLAGL2Q9UPG8 496 aa6.07□□□□□ -1.44
PCM1-217ENST00000522998 RNGTTO60942 597 aaKnown RBP6.06□□□□□ -1.44
PCM1-217ENST00000522998 LRRC56Q8IYG6 542 aaPredicted RBP6.06□□□□□ -1.44
PCM1-217ENST00000522998 ZC3H12CQ9C0D7 883 aaKnown RBP6.06□□□□□ -1.44
PCM1-217ENST00000522998 EHD4Q9H223 541 aa6.06□□□□□ -1.44
PCM1-217ENST00000522998 DISC1Q9NRI5 854 aa6.06□□□□□ -1.44
PCM1-217ENST00000522998 HNRNPUQ00839 825 aaKnown RBP eCLIP6.05□□□□□ -1.44
PCM1-217ENST00000522998 SF3B2Q13435 895 aaKnown RBP6.05□□□□□ -1.44
PCM1-217ENST00000522998 TTLL4Q14679 1199 aa6.05□□□□□ -1.44
PCM1-217ENST00000522998 LCNL1Q6ZST4 164 aa6.05□□□□□ -1.44
PCM1-217ENST00000522998 C1QL4Q86Z23 238 aa6.05□□□□□ -1.44
PCM1-217ENST00000522998 LIN37Q96GY3 246 aaPredicted RBP6.05□□□□□ -1.44
PCM1-217ENST00000522998 PCOLCE2Q9UKZ9 415 aa6.05□□□□□ -1.44
PCM1-217ENST00000522998 SNX11Q9Y5W9 270 aa6.05□□□□□ -1.44
PCM1-217ENST00000522998 ZNF862O60290 1169 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 HCLS1P14317 486 aaPredicted RBP6.04□□□□□ -1.44
PCM1-217ENST00000522998 SSFA2P28290 1259 aa6.04□□□□□ -1.44
PCM1-217ENST00000522998 FKBP4Q02790 459 aaKnown RBP eCLIP6.04□□□□□ -1.44
PCM1-217ENST00000522998 PTPN12Q05209 780 aaKnown RBP6.04□□□□□ -1.44
PCM1-217ENST00000522998 IKZF1Q13422 519 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms