RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 FAM117BQ6P1L5 589 aa6.85□□□□□ -1.31
SKP1-210ENST00000522855 NECAB3Q96P71 396 aaPredicted RBP6.85□□□□□ -1.31
SKP1-210ENST00000522855 RSRP1Q9BUV0 290 aa6.85□□□□□ -1.31
SKP1-210ENST00000522855 DDX41Q9UJV9 622 aaKnown RBP6.85□□□□□ -1.31
SKP1-210ENST00000522855 DDX3YO15523 660 aaKnown RBP6.84□□□□□ -1.31
SKP1-210ENST00000522855 LMNB1P20700 586 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 CD97P48960 835 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 PIP4K2BP78356 416 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 IKBKEQ14164 716 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
SKP1-210ENST00000522855 VN1R5Q7Z5H4 357 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 RELL1Q8IUW5 271 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 KLHDC7BQ96G42 594 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 OSGEPQ9NPF4 335 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 SEC31BQ9NQW1 1179 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 RAXQ9Y2V3 346 aa6.84□□□□□ -1.31
SKP1-210ENST00000522855 ENC1O14682 589 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 CELA3AP09093 270 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 ESRRAP11474 423 aaPredicted RBP6.83□□□□□ -1.32
SKP1-210ENST00000522855 CDC25BP30305 580 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 ARL4DP49703 201 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 LIG3P49916 1009 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 RPS26P62854 115 aaKnown RBP6.83□□□□□ -1.32
SKP1-210ENST00000522855 HNRNPUQ00839 825 aaKnown RBP eCLIP6.83□□□□□ -1.32
SKP1-210ENST00000522855 FAAP100Q0VG06 881 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 ZNF394Q53GI3 561 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 NAALADL2Q58DX5 795 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 CEP41Q9BYV8 373 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 KBTBD4Q9NVX7 518 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 PCDHGB7Q9Y5F8 929 aa6.83□□□□□ -1.32
SKP1-210ENST00000522855 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
SKP1-210ENST00000522855 GBP2P32456 591 aaPredicted RBP6.82□□□□□ -1.32
SKP1-210ENST00000522855 SF3A1Q15459 793 aaKnown RBP6.82□□□□□ -1.32
SKP1-210ENST00000522855 HGSNATQ68CP4 663 aa6.82□□□□□ -1.32
SKP1-210ENST00000522855 TTBK2Q6IQ55 1244 aa6.82□□□□□ -1.32
SKP1-210ENST00000522855 TMEM74Q96NL1 305 aa6.82□□□□□ -1.32
SKP1-210ENST00000522855 SOX17Q9H6I2 414 aaPredicted RBP6.82□□□□□ -1.32
SKP1-210ENST00000522855 INPP5FQ9Y2H2 1132 aa6.82□□□□□ -1.32
SKP1-210ENST00000522855 CCDC180Q9P1Z9 1646 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 IGLV1-40P01703 118 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 AP3B2Q13367 1082 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 MAP3K11Q16584 847 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 DUOXA2Q1HG44 320 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 PCNX4Q63HM2 1172 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.81□□□□□ -1.32
SKP1-210ENST00000522855 SREK1Q8WXA9 508 aaKnown RBP6.81□□□□□ -1.32
SKP1-210ENST00000522855 MYRFLQ96LU7 910 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 EMILIN2Q9BXX0 1053 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 ACBD3Q9H3P7 528 aa6.81□□□□□ -1.32
SKP1-210ENST00000522855 KIAA1324LA8MWY0 1029 aaPredicted RBP6.8□□□□□ -1.32
SKP1-210ENST00000522855 GSC2O15499 205 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 DHX15O43143 795 aaKnown RBP6.8□□□□□ -1.32
SKP1-210ENST00000522855 NME2P22392 152 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 C19orf57Q0VDD7 668 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 LRRC14Q15048 493 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 ZNF423Q2M1K9 1284 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 NBPF11Q86T75 865 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 ZDHHC13Q8IUH4 622 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 KIAA0825Q8IV33 1275 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 SULF2Q8IWU5 870 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 PHC3Q8NDX5 983 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 UTP4Q969X6 686 aaKnown RBP6.8□□□□□ -1.32
SKP1-210ENST00000522855 TRIM56Q9BRZ2 755 aaKnown RBP6.8□□□□□ -1.32
SKP1-210ENST00000522855 SPON2Q9BUD6 331 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 C7orf69Q9H7B7 122 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 CAPN10Q9HC96 672 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 COPRSQ9NQ92 184 aa6.8□□□□□ -1.32
SKP1-210ENST00000522855 PREPP48147 710 aa6.79□□□□□ -1.32
SKP1-210ENST00000522855 ZNF157P51786 506 aaPredicted RBP6.79□□□□□ -1.32
SKP1-210ENST00000522855 RACK1P63244 317 aaKnown RBP6.79□□□□□ -1.32
SKP1-210ENST00000522855 AGMOQ6ZNB7 445 aa6.79□□□□□ -1.32
SKP1-210ENST00000522855 SLC7A3Q8WY07 619 aa6.79□□□□□ -1.32
SKP1-210ENST00000522855 RHOVQ96L33 236 aa6.79□□□□□ -1.32
SKP1-210ENST00000522855 SPATA32Q96LK8 384 aa6.79□□□□□ -1.32
SKP1-210ENST00000522855 KRTAP4-12Q9BQ66 201 aa6.79□□□□□ -1.32
SKP1-210ENST00000522855 TINF2Q9BSI4 451 aa6.79□□□□□ -1.32
SKP1-210ENST00000522855 CYP8B1Q9UNU6 501 aa6.79□□□□□ -1.32
SKP1-210ENST00000522855 SUPT16HQ9Y5B9 1047 aaKnown RBP6.79□□□□□ -1.32
SKP1-210ENST00000522855 PAGE1O75459 146 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 MED26O95402 600 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 TGFB1P01137 390 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 CYP11A1P05108 521 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 EIF4A3P38919 411 aaKnown RBP6.78□□□□□ -1.32
SKP1-210ENST00000522855 NLRP12P59046 1061 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 LMNB2Q03252 620 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 NFIAQ12857 509 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 SNAP47Q5SQN1 464 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 HP1BP3Q5SSJ5 553 aaPredicted RBP6.78□□□□□ -1.32
SKP1-210ENST00000522855 ANKRD34AQ69YU3 496 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 SCARA3Q6AZY7 606 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 LLGL2Q6P1M3 1020 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 VPS37DQ86XT2 251 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 FAM20CQ8IXL6 584 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 SLC43A3Q8NBI5 491 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 NRSN2Q9GZP1 204 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 RNF208Q9H0X6 261 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 STOML1Q9UBI4 398 aa6.78□□□□□ -1.32
SKP1-210ENST00000522855 MEGF11A6BM72 1044 aa6.77□□□□□ -1.33
SKP1-210ENST00000522855 MINDY4BA8MYZ0 360 aa6.77□□□□□ -1.33
SKP1-210ENST00000522855 SOX1O00570 391 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms