RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 GABRQQ9UN88 632 aa16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 KCNH4Q9UQ05 1017 aa16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 INHAP05111 366 aa16.7■□□□□ 0.26
SRGAP3-212ENST00000520860 INPP5BP32019 993 aa16.7■□□□□ 0.26
SRGAP3-212ENST00000520860 GYG1P46976 350 aa16.7■□□□□ 0.26
SRGAP3-212ENST00000520860 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
SRGAP3-212ENST00000520860 CCDC57Q2TAC2 916 aa16.7■□□□□ 0.26
SRGAP3-212ENST00000520860 NECAB2Q7Z6G3 386 aa16.7■□□□□ 0.26
SRGAP3-212ENST00000520860 DNAAF4Q8WXU2 420 aa16.7■□□□□ 0.26
SRGAP3-212ENST00000520860 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 APAF1O14727 1248 aa16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 BCRP11274 1271 aa16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 ELNP15502 786 aa16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 FKBP1CQ5VVH2 108 aa16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 C7orf61Q8IZ16 206 aa16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 PXYLP1Q8TE99 480 aa16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 PAWRQ96IZ0 340 aaKnown RBP16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 FAM84BQ96KN1 310 aaPredicted RBP16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 MTMR10Q9NXD2 777 aa16.69■□□□□ 0.26
SRGAP3-212ENST00000520860 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 FLT3LGP49771 235 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 FOXO4P98177 505 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 FLIIQ13045 1269 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 CHAF1AQ13111 956 aaPredicted RBP16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 FKBP5Q13451 457 aaPredicted RBP16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 LRIT3Q3SXY7 679 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 LMBR1LQ6UX01 489 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 MIGA2Q7L4E1 593 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 TBC1D22AQ8WUA7 517 aa16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 ZNF594Q96JF6 807 aaPredicted RBP16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 ZMYND8Q9ULU4 1186 aaPredicted RBP16.68■□□□□ 0.26
SRGAP3-212ENST00000520860 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
SRGAP3-212ENST00000520860 CYP2C8P10632 490 aa16.67■□□□□ 0.26
SRGAP3-212ENST00000520860 BCAMP50895 628 aa16.67■□□□□ 0.26
SRGAP3-212ENST00000520860 GRIK5Q16478 980 aa16.67■□□□□ 0.26
SRGAP3-212ENST00000520860 ZDHHC15Q96MV8 337 aa16.67■□□□□ 0.26
SRGAP3-212ENST00000520860 PAK6Q9NQU5 681 aaPredicted RBP16.67■□□□□ 0.26
SRGAP3-212ENST00000520860 MGAMO43451 1857 aa16.67■□□□□ 0.26
SRGAP3-212ENST00000520860 TNPO2O14787 897 aaKnown RBP16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 IRF5Q13568 498 aa16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 MOGSQ13724 837 aa16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 TDHQ8IZJ6 230 aa16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 CRISPLD2Q9H0B8 497 aa16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 MAST3O60307 1309 aa16.66■□□□□ 0.26
SRGAP3-212ENST00000520860 ALPK3Q96L96 1907 aa16.65■□□□□ 0.26
SRGAP3-212ENST00000520860 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
SRGAP3-212ENST00000520860 DIS3LQ8TF46 1054 aaKnown RBP16.65■□□□□ 0.26
SRGAP3-212ENST00000520860 TSR2Q969E8 191 aaKnown RBP16.65■□□□□ 0.26
SRGAP3-212ENST00000520860 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
SRGAP3-212ENST00000520860 CXCL11O14625 94 aa16.64■□□□□ 0.25
SRGAP3-212ENST00000520860 MAGEA10P43363 369 aaPredicted RBP16.64■□□□□ 0.25
SRGAP3-212ENST00000520860 NOL9Q5SY16 702 aaKnown RBP16.64■□□□□ 0.25
SRGAP3-212ENST00000520860 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.25
SRGAP3-212ENST00000520860 ANKLE1Q8NAG6 615 aa16.64■□□□□ 0.25
SRGAP3-212ENST00000520860 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.25
SRGAP3-212ENST00000520860 ZNF112Q9UJU3 913 aa16.64■□□□□ 0.25
SRGAP3-212ENST00000520860 SYN1P17600 705 aa16.63■□□□□ 0.25
SRGAP3-212ENST00000520860 GPAT2Q6NUI2 795 aa16.63■□□□□ 0.25
SRGAP3-212ENST00000520860 FASTKD5Q7L8L6 764 aaKnown RBP16.63■□□□□ 0.25
SRGAP3-212ENST00000520860 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
SRGAP3-212ENST00000520860 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
SRGAP3-212ENST00000520860 CAVIN4Q5BKX8 364 aa16.62■□□□□ 0.25
SRGAP3-212ENST00000520860 EPHA10Q5JZY3 1008 aa16.62■□□□□ 0.25
SRGAP3-212ENST00000520860 FBXO33Q7Z6M2 555 aa16.62■□□□□ 0.25
SRGAP3-212ENST00000520860 SMCR8Q8TEV9 937 aaPredicted RBP16.62■□□□□ 0.25
SRGAP3-212ENST00000520860 COA7Q96BR5 231 aa16.62■□□□□ 0.25
SRGAP3-212ENST00000520860 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
SRGAP3-212ENST00000520860 AK9Q5TCS8 1911 aa16.61■□□□□ 0.25
SRGAP3-212ENST00000520860 HHIPL2Q6UWX4 724 aa16.61■□□□□ 0.25
SRGAP3-212ENST00000520860 GADL1Q6ZQY3 521 aa16.61■□□□□ 0.25
SRGAP3-212ENST00000520860 SUGT1Q9Y2Z0 365 aa16.61■□□□□ 0.25
SRGAP3-212ENST00000520860 RPTORQ8N122 1335 aa16.61■□□□□ 0.25
SRGAP3-212ENST00000520860 TCP10Q12799 353 aa16.6■□□□□ 0.25
SRGAP3-212ENST00000520860 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
SRGAP3-212ENST00000520860 PICK1Q9NRD5 415 aa16.6■□□□□ 0.25
SRGAP3-212ENST00000520860 SLC45A1Q9Y2W3 748 aa16.6■□□□□ 0.25
SRGAP3-212ENST00000520860 MROH5Q6ZUA9 1318 aa16.6■□□□□ 0.25
SRGAP3-212ENST00000520860 A0A0G2JLL6 359 aaPredicted RBP16.59■□□□□ 0.25
SRGAP3-212ENST00000520860 PRRT2Q7Z6L0 340 aaPredicted RBP16.59■□□□□ 0.25
SRGAP3-212ENST00000520860 C11orf49Q9H6J7 331 aa16.59■□□□□ 0.25
SRGAP3-212ENST00000520860 ZHX2Q9Y6X8 837 aa16.59■□□□□ 0.25
SRGAP3-212ENST00000520860 GRM8O00222 908 aa16.58■□□□□ 0.24
SRGAP3-212ENST00000520860 HMGCRP04035 888 aa16.58■□□□□ 0.24
SRGAP3-212ENST00000520860 BEND3Q5T5X7 828 aa16.58■□□□□ 0.24
SRGAP3-212ENST00000520860 HMX1Q9NP08 348 aaPredicted RBP16.58■□□□□ 0.24
SRGAP3-212ENST00000520860 DOCK3Q8IZD9 2030 aa16.58■□□□□ 0.24
SRGAP3-212ENST00000520860 F6X3S4 739 aa16.57■□□□□ 0.24
SRGAP3-212ENST00000520860 SCYL3Q8IZE3 742 aa16.57■□□□□ 0.24
SRGAP3-212ENST00000520860 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
SRGAP3-212ENST00000520860 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
SRGAP3-212ENST00000520860 CACNA1FO60840 1977 aa16.57■□□□□ 0.24
SRGAP3-212ENST00000520860 PTPRAP18433 802 aa16.56■□□□□ 0.24
SRGAP3-212ENST00000520860 METTL24Q5JXM2 366 aa16.56■□□□□ 0.24
SRGAP3-212ENST00000520860 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
SRGAP3-212ENST00000520860 NFIAQ12857 509 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms