RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 GOLGA8AA7E2F4 631 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 ANKRD65E5RJM6 399 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 AFMP43652 599 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 CCDC57Q2TAC2 916 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 BPIFA3Q9BQP9 254 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 MROH7-TTC4A0A0A0MT08 1334 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 FOXN1O15353 648 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 POLR2DO15514 142 aaKnown RBP14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 ZRANB2O95218 330 aaKnown RBP eCLIP14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 FILIP1LQ4L180 1135 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 XRN1Q8IZH2 1706 aaKnown RBP14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 SH3TC1Q8TE82 1336 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 MYO1CO00159 1063 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 MTF1Q14872 753 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 GRAMD1CQ8IYS0 662 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 RABGGTAQ92696 567 aa14.67□□□□□ -0.06
TRAPPC9-208ENST00000520857 GCP02774 474 aa14.66□□□□□ -0.06
TRAPPC9-208ENST00000520857 SPATA31D1Q6ZQQ2 1576 aa14.66□□□□□ -0.06
TRAPPC9-208ENST00000520857 SNRPA1P09661 255 aaKnown RBP14.66□□□□□ -0.06
TRAPPC9-208ENST00000520857 NUP133Q8WUM0 1156 aa14.66□□□□□ -0.06
TRAPPC9-208ENST00000520857 ACBD3Q9H3P7 528 aa14.66□□□□□ -0.06
TRAPPC9-208ENST00000520857 TECPR2O15040 1411 aa14.66□□□□□ -0.06
TRAPPC9-208ENST00000520857 SOWAHDA6NJG2 315 aa14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 TXLNAP40222 546 aa14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 IL15P40933 162 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 TATP17735 454 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 KCNJ6P48051 423 aa14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 AXDND1Q5T1B0 1012 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 RAI14Q9P0K7 980 aa14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 AKR1B15C9JRZ8 316 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 ZBTB43O43298 467 aa14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 SHC4Q6S5L8 630 aa14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 HDXQ7Z353 690 aa14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 SAMSN1Q9NSI8 373 aaKnown RBP14.65□□□□□ -0.06
TRAPPC9-208ENST00000520857 B4E1Z4 1266 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 ATP8B1O43520 1251 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 STX10O60499 249 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 CABP4P57796 275 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 IGSF22Q8N9C0 903 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 IPO4Q8TEX9 1081 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 PUS3Q9BZE2 481 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 TMEM67Q5HYA8 995 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 KRI1Q8N9T8 703 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 FAM53CQ9NYF3 392 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 SERTAD1Q9UHV2 236 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 RRP15Q9Y3B9 282 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 CTAGE15A4D2H0 777 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 CTAGE9A4FU28 777 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 CTAGE8P0CG41 777 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 PI16Q6UXB8 463 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 CTAGE6Q86UF2 777 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 CTAGE4Q8IX94 777 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 GDAP1L1Q96MZ0 367 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 PLEKHA4Q9H4M7 779 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 FAN1Q9Y2M0 1017 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 MRFAP1Q9Y605 127 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 RIMBP3CA6NJZ7 1639 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 RIMBP3BA6NNM3 1639 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 RIMBP3Q9UFD9 1639 aa14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 FAM208AQ9UK61 1670 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-208ENST00000520857 PDE4BQ07343 736 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 CEP112Q8N8E3 955 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 GOLGA5Q8TBA6 731 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 C19orf44Q9H6X5 657 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 SUGCTQ9HAC7 445 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 KCND1Q9NSA2 647 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 CWC25Q9NXE8 425 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 TBX22Q9Y458 520 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 CCDC151A5D8V7 595 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 IFIT3O14879 490 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 GPAA1O43292 621 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 COBLO75128 1261 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 MAP3K9P80192 1104 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 POSTNQ15063 836 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 FCHSD1Q86WN1 690 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 TRIM22Q8IYM9 498 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 KCNJ14Q9UNX9 436 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 EYA2O00167 538 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 ACTN2P35609 894 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 CCT6AP40227 531 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 PDIA6Q15084 440 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 CAGE1Q8TC20 777 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 NUP88Q99567 741 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 ANGEL1Q9UNK9 670 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 SLC12A7Q9Y666 1083 aa14.63□□□□□ -0.07
TRAPPC9-208ENST00000520857 PTPRUQ92729 1446 aa14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 METTL16Q86W50 562 aaKnown RBP14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 RASSF8Q8NHQ8 419 aa14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 LCMT1Q9UIC8 334 aa14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 CUTAO60888 179 aa14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 ZAP70P43403 619 aa14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 RFX5P48382 616 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 BRD3Q15059 726 aa14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 TSR1Q2NL82 804 aaKnown RBP14.62□□□□□ -0.07
TRAPPC9-208ENST00000520857 SRGAP1Q7Z6B7 1085 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms