RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 CXCL9Q07325 125 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 HHIPL2Q6UWX4 724 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 AGBL3Q8NEM8 1001 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 FAM163AQ96GL9 167 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-208ENST00000520561 NAPBQ9H115 298 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 RNF181Q9P0P0 153 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 ADAMTSL1Q8N6G6 1762 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 LAMA4Q16363 1823 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 GPR75-ASB3A0A0A6YYF3 556 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 PATL2C9JE40 543 aaKnown RBP10.68□□□□□ -0.7
CSMD1-208ENST00000520561 FZD9O00144 591 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 RPS12P25398 132 aaKnown RBP10.68□□□□□ -0.7
CSMD1-208ENST00000520561 USP5P45974 858 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 RBM5P52756 815 aaKnown RBP eCLIP10.68□□□□□ -0.7
CSMD1-208ENST00000520561 ANAPC15P60006 121 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 TEX11Q8IYF3 940 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 OGFOD1Q8N543 542 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 MRIQ9BWK5 157 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 SERPINA10Q9UK55 444 aa10.68□□□□□ -0.7
CSMD1-208ENST00000520561 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
CSMD1-208ENST00000520561 ZNF541Q9H0D2 1346 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 SLC27A2O14975 620 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 MMP14P50281 582 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 PPP4CP60510 307 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 IMMTQ16891 758 aaKnown RBP10.67□□□□□ -0.7
CSMD1-208ENST00000520561 CREB3L3Q68CJ9 461 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 GIMAP6Q6P9H5 292 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 AMOTL1Q8IY63 956 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 SH3RF3Q8TEJ3 882 aaPredicted RBP10.67□□□□□ -0.7
CSMD1-208ENST00000520561 SDR42E1Q8WUS8 393 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 ZDHHC15Q96MV8 337 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 EPB41L4AQ9HCS5 686 aaPredicted RBP10.67□□□□□ -0.7
CSMD1-208ENST00000520561 ATP8A2Q9NTI2 1148 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
CSMD1-208ENST00000520561 GJA3Q9Y6H8 435 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 SBF1O95248 1867 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 LAMB1P07942 1786 aa10.67□□□□□ -0.7
CSMD1-208ENST00000520561 ZC3H4Q9UPT8 1303 aaKnown RBP10.66□□□□□ -0.7
CSMD1-208ENST00000520561 GSG1L2A8MUP6 293 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 FOXP2O15409 715 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 PRKAB2O43741 272 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 USP17L8P0C7I0 530 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 KRT32Q14532 448 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 NECTIN1Q15223 517 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 RABEP1Q15276 862 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 ALX1Q15699 326 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 CFAP100Q494V2 611 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 C9orf131Q5VYM1 1079 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 IFNL3Q8IZI9 196 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 GMLQ99445 158 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 TMOD2Q9NZR1 351 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 ARPP21Q9UBL0 812 aaPredicted RBP10.66□□□□□ -0.7
CSMD1-208ENST00000520561 PALD1Q9ULE6 856 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 SNX14Q9Y5W7 946 aa10.66□□□□□ -0.7
CSMD1-208ENST00000520561 DDX60LQ5H9U9 1706 aaKnown RBP10.65□□□□□ -0.7
CSMD1-208ENST00000520561 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
CSMD1-208ENST00000520561 ZNF213O14771 459 aa10.65□□□□□ -0.7
CSMD1-208ENST00000520561 FGAP02671 866 aa10.65□□□□□ -0.7
CSMD1-208ENST00000520561 GMPSP49915 693 aaPredicted RBP10.65□□□□□ -0.7
CSMD1-208ENST00000520561 RHBDL3P58872 404 aa10.65□□□□□ -0.7
CSMD1-208ENST00000520561 DLGAP5Q15398 846 aa10.65□□□□□ -0.7
CSMD1-208ENST00000520561 GPC2Q8N158 579 aa10.65□□□□□ -0.7
CSMD1-208ENST00000520561 KCNB2Q92953 911 aa10.65□□□□□ -0.7
CSMD1-208ENST00000520561 USP40Q9NVE5 1235 aa10.65□□□□□ -0.7
CSMD1-208ENST00000520561 FOCADQ5VW36 1801 aa10.65□□□□□ -0.71
CSMD1-208ENST00000520561 FLT1P17948 1338 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 ECM29Q5VYK3 1845 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 MYO1BO43795 1136 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 CYP21A2P08686 494 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 PSMA5P28066 241 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 HAND2P61296 217 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 APOBEC3HQ6NTF7 200 aaKnown RBP10.64□□□□□ -0.71
CSMD1-208ENST00000520561 MAPKAPK5Q8IW41 473 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 MICALL2Q8IY33 904 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 TGFBRAP1Q8WUH2 860 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 DPF2Q92785 391 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 JAKMIP1Q96N16 626 aaKnown RBP10.64□□□□□ -0.71
CSMD1-208ENST00000520561 DCP1AQ9NPI6 582 aaPredicted RBP10.64□□□□□ -0.71
CSMD1-208ENST00000520561 MCM9Q9NXL9 1143 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 CDK5RAP2Q96SN8 1893 aa10.64□□□□□ -0.71
CSMD1-208ENST00000520561 SPDYE2BA6NHP3 402 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 MINDY4BA8MYZ0 360 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 H7C1D1 291 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 SLC3A2P08195 630 aaKnown RBP10.63□□□□□ -0.71
CSMD1-208ENST00000520561 SPDYE6P0CI01 402 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 LMOD1P29536 600 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-208ENST00000520561 ZNF280AP59817 542 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-208ENST00000520561 PPARAQ07869 468 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 TRDNQ13061 729 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 PICALMQ13492 652 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 TSGA10IPQ3SY00 556 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 CDC42EP5Q6NZY7 148 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 RASEFQ8IZ41 740 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 MTMR14Q8NCE2 650 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 IL27Q8NEV9 243 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-208ENST00000520561 MYOZ2Q9NPC6 264 aa10.63□□□□□ -0.71
CSMD1-208ENST00000520561 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms